BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00017227
         (458 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_564675.1| polyubiquitin 12 [Arabidopsis thaliana] gi|1222...    98   2e-36
gb|AAI27396.1| Zgc:153686 [Danio rerio]                                96   2e-36
ref|XP_002888365.1| polyubiquitin [Arabidopsis lyrata subsp. lyr...    99   3e-36
gb|AAC67552.1| polyubiquitin [Saccharum hybrid cultivar H32-8560]      99   4e-36
gb|AAB95252.1| ubiquitin [Arabidopsis thaliana]                        99   4e-36

>ref|NP_564675.1| polyubiquitin 12 [Arabidopsis thaliana]
           gi|122213849|sp|Q3E7K8.1|UBQ12_ARATH RecName:
           Full=Polyubiquitin 12; Contains: RecName:
           Full=Ubiquitin-related 1; Contains: RecName:
           Full=Ubiquitin-related 2; Contains: RecName:
           Full=Ubiquitin-related 3; Flags: Precursor
           gi|332195060|gb|AEE33181.1| polyubiquitin 12
           [Arabidopsis thaliana]
          Length = 230

 Score = 97.8 bits (242), Expect(2) = 2e-36
 Identities = 54/98 (55%), Positives = 68/98 (69%), Gaps = 10/98 (10%)
 Frame = +1

Query: 1   KGIPLDQHRLICVGW------TVFDCNINKASTLYLVLFHLGGMEIYVKTVTGRTATLAI 162
           +GIP DQHRLI  G       T+ D N+ + STL+L+L   GGM+I+VKT+TG+T TL +
Sbjct: 34  EGIPPDQHRLIFAGKQLEDGRTLADYNVQEDSTLHLLLRFRGGMQIFVKTLTGKTITLEV 93

Query: 163 GSFEIIDNVKAKTQEKEGIPPGQS----AGKQFEDGRT 264
            S + IDN+KAK Q+KEGIPP Q     AGKQ EDGRT
Sbjct: 94  ESSDTIDNLKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131



 Score = 80.1 bits (196), Expect(2) = 2e-36
 Identities = 44/61 (72%), Positives = 50/61 (81%), Gaps = 1/61 (1%)
 Frame = +2

Query: 278 YSIQ-ESILLFFSCLCGGMQIFLKTLTGKTVTLEVERTNNINNVKAKIQDIEGISPDQQR 454
           Y+IQ ES L     L GGMQIF+KTLTGKT+TLEVE ++ I+NVKAKIQD EGISPDQQR
Sbjct: 135 YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGISPDQQR 194

Query: 455 L 457
           L
Sbjct: 195 L 195



 Score = 75.5 bits (184), Expect(2) = 1e-24
 Identities = 40/61 (65%), Positives = 48/61 (78%), Gaps = 1/61 (1%)
 Frame = +2

Query: 278 YSIQE-SILLFFSCLCGGMQIFLKTLTGKTVTLEVERTNNINNVKAKIQDIEGISPDQQR 454
           Y++QE S L       GGMQIF+KTLTGKT+TLEVE ++ I+N+KAKIQD EGI PDQQR
Sbjct: 59  YNVQEDSTLHLLLRFRGGMQIFVKTLTGKTITLEVESSDTIDNLKAKIQDKEGIPPDQQR 118

Query: 455 L 457
           L
Sbjct: 119 L 119



 Score = 62.8 bits (151), Expect(2) = 1e-24
 Identities = 32/55 (58%), Positives = 40/55 (72%), Gaps = 4/55 (7%)
 Frame = +1

Query: 112 MEIYVKTVTGRTATLAIGSFEIIDNVKAKTQEKEGIPPGQS----AGKQFEDGRT 264
           M+I++KT+TG+T  L + S + IDNVKAK Q+ EGIPP Q     AGKQ EDGRT
Sbjct: 1   MQIFLKTLTGKTKVLEVESSDTIDNVKAKIQDIEGIPPDQHRLIFAGKQLEDGRT 55



 Score = 95.1 bits (235), Expect = 5e-18
 Identities = 56/98 (57%), Positives = 66/98 (67%), Gaps = 10/98 (10%)
 Frame = +1

Query: 1   KGIPLDQHRLICVGW------TVFDCNINKASTLYLVLFHLGGMEIYVKTVTGRTATLAI 162
           +GIP DQ RLI  G       T+ D NI K STL+LVL   GGM+I+VKT+TG+T TL +
Sbjct: 110 EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEV 169

Query: 163 GSFEIIDNVKAKTQEKEGIPPGQS----AGKQFEDGRT 264
            S + IDNVKAK Q+KEGI P Q     AGKQ EDGRT
Sbjct: 170 ESSDTIDNVKAKIQDKEGISPDQQRLIFAGKQHEDGRT 207



 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 34/43 (79%), Positives = 37/43 (86%)
 Frame = +2

Query: 329 MQIFLKTLTGKTVTLEVERTNNINNVKAKIQDIEGISPDQQRL 457
           MQIFLKTLTGKT  LEVE ++ I+NVKAKIQDIEGI PDQ RL
Sbjct: 1   MQIFLKTLTGKTKVLEVESSDTIDNVKAKIQDIEGIPPDQHRL 43


>gb|AAI27396.1| Zgc:153686 [Danio rerio]
          Length = 533

 Score = 95.1 bits (235), Expect(2) = 2e-36
 Identities = 55/98 (56%), Positives = 66/98 (67%), Gaps = 10/98 (10%)
 Frame = +1

Query: 1   KGIPLDQHRLICVGW------TVFDCNINKASTLYLVLFHLGGMEIYVKTVTGRTATLAI 162
           +GIP DQ RLI  G       T+ D NI K STL+LVL   GGM+I+VKT+TG+T TL +
Sbjct: 186 EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEV 245

Query: 163 GSFEIIDNVKAKTQEKEGIPPGQS----AGKQFEDGRT 264
              + I+NVKAK Q+KEGIPP Q     AGKQ EDGRT
Sbjct: 246 EPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 283



 Score = 82.4 bits (202), Expect(2) = 2e-36
 Identities = 44/63 (69%), Positives = 50/63 (79%), Gaps = 1/63 (1%)
 Frame = +2

Query: 272 TSYSIQ-ESILLFFSCLCGGMQIFLKTLTGKTVTLEVERTNNINNVKAKIQDIEGISPDQ 448
           + Y+IQ ES L    CL GGMQIF+KTLTGKT+TLEVE ++ I NVKAKIQD EGI PDQ
Sbjct: 285 SDYNIQKESTLHLVLCLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 344

Query: 449 QRL 457
           QRL
Sbjct: 345 QRL 347



 Score = 95.5 bits (236), Expect(2) = 4e-35
 Identities = 55/98 (56%), Positives = 66/98 (67%), Gaps = 10/98 (10%)
 Frame = +1

Query: 1   KGIPLDQHRLICVGW------TVFDCNINKASTLYLVLFHLGGMEIYVKTVTGRTATLAI 162
           +GIP DQ RLI  G       T+ D NI K STL+LVL   GGM+I+VKT+TG+T TL +
Sbjct: 262 EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLCLRGGMQIFVKTLTGKTITLEV 321

Query: 163 GSFEIIDNVKAKTQEKEGIPPGQS----AGKQFEDGRT 264
              + I+NVKAK Q+KEGIPP Q     AGKQ EDGRT
Sbjct: 322 EPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 359



 Score = 77.8 bits (190), Expect(2) = 4e-35
 Identities = 43/63 (68%), Positives = 49/63 (77%), Gaps = 1/63 (1%)
 Frame = +2

Query: 272 TSYSIQ-ESILLFFSCLCGGMQIFLKTLTGKTVTLEVERTNNINNVKAKIQDIEGISPDQ 448
           + Y+IQ ES L     L GGMQIF+KTLTGKT+TLEVE ++ I NVKAKIQD EGI PDQ
Sbjct: 361 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 420

Query: 449 QRL 457
           QRL
Sbjct: 421 QRL 423



 Score = 95.1 bits (235), Expect(2) = 5e-35
 Identities = 55/98 (56%), Positives = 66/98 (67%), Gaps = 10/98 (10%)
 Frame = +1

Query: 1   KGIPLDQHRLICVGW------TVFDCNINKASTLYLVLFHLGGMEIYVKTVTGRTATLAI 162
           +GIP DQ RLI  G       T+ D NI K STL+LVL   GGM+I+VKT+TG+T TL +
Sbjct: 34  EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEV 93

Query: 163 GSFEIIDNVKAKTQEKEGIPPGQS----AGKQFEDGRT 264
              + I+NVKAK Q+KEGIPP Q     AGKQ EDGRT
Sbjct: 94  EPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131



 Score = 95.1 bits (235), Expect(2) = 5e-35
 Identities = 55/98 (56%), Positives = 66/98 (67%), Gaps = 10/98 (10%)
 Frame = +1

Query: 1   KGIPLDQHRLICVGW------TVFDCNINKASTLYLVLFHLGGMEIYVKTVTGRTATLAI 162
           +GIP DQ RLI  G       T+ D NI K STL+LVL   GGM+I+VKT+TG+T TL +
Sbjct: 110 EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEV 169

Query: 163 GSFEIIDNVKAKTQEKEGIPPGQS----AGKQFEDGRT 264
              + I+NVKAK Q+KEGIPP Q     AGKQ EDGRT
Sbjct: 170 EPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 207



 Score = 95.1 bits (235), Expect(2) = 5e-35
 Identities = 55/98 (56%), Positives = 66/98 (67%), Gaps = 10/98 (10%)
 Frame = +1

Query: 1   KGIPLDQHRLICVGW------TVFDCNINKASTLYLVLFHLGGMEIYVKTVTGRTATLAI 162
           +GIP DQ RLI  G       T+ D NI K STL+LVL   GGM+I+VKT+TG+T TL +
Sbjct: 338 EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEV 397

Query: 163 GSFEIIDNVKAKTQEKEGIPPGQS----AGKQFEDGRT 264
              + I+NVKAK Q+KEGIPP Q     AGKQ EDGRT
Sbjct: 398 EPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 435



 Score = 77.8 bits (190), Expect(2) = 5e-35
 Identities = 43/63 (68%), Positives = 49/63 (77%), Gaps = 1/63 (1%)
 Frame = +2

Query: 272 TSYSIQ-ESILLFFSCLCGGMQIFLKTLTGKTVTLEVERTNNINNVKAKIQDIEGISPDQ 448
           + Y+IQ ES L     L GGMQIF+KTLTGKT+TLEVE ++ I NVKAKIQD EGI PDQ
Sbjct: 133 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 192

Query: 449 QRL 457
           QRL
Sbjct: 193 QRL 195



 Score = 77.8 bits (190), Expect(2) = 5e-35
 Identities = 43/63 (68%), Positives = 49/63 (77%), Gaps = 1/63 (1%)
 Frame = +2

Query: 272 TSYSIQ-ESILLFFSCLCGGMQIFLKTLTGKTVTLEVERTNNINNVKAKIQDIEGISPDQ 448
           + Y+IQ ES L     L GGMQIF+KTLTGKT+TLEVE ++ I NVKAKIQD EGI PDQ
Sbjct: 209 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 268

Query: 449 QRL 457
           QRL
Sbjct: 269 QRL 271



 Score = 77.8 bits (190), Expect(2) = 5e-35
 Identities = 43/63 (68%), Positives = 49/63 (77%), Gaps = 1/63 (1%)
 Frame = +2

Query: 272 TSYSIQ-ESILLFFSCLCGGMQIFLKTLTGKTVTLEVERTNNINNVKAKIQDIEGISPDQ 448
           + Y+IQ ES L     L GGMQIF+KTLTGKT+TLEVE ++ I NVKAKIQD EGI PDQ
Sbjct: 437 SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 496

Query: 449 QRL 457
           QRL
Sbjct: 497 QRL 499



 Score = 77.8 bits (190), Expect(2) = 3e-26
 Identities = 43/63 (68%), Positives = 49/63 (77%), Gaps = 1/63 (1%)
 Frame = +2

Query: 272 TSYSIQ-ESILLFFSCLCGGMQIFLKTLTGKTVTLEVERTNNINNVKAKIQDIEGISPDQ 448
           + Y+IQ ES L     L GGMQIF+KTLTGKT+TLEVE ++ I NVKAKIQD EGI PDQ
Sbjct: 57  SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 116

Query: 449 QRL 457
           QRL
Sbjct: 117 QRL 119



 Score = 65.9 bits (159), Expect(2) = 3e-26
 Identities = 33/55 (60%), Positives = 41/55 (74%), Gaps = 4/55 (7%)
 Frame = +1

Query: 112 MEIYVKTVTGRTATLAIGSFEIIDNVKAKTQEKEGIPPGQS----AGKQFEDGRT 264
           M+I+VKT+TG+T TL +   + I+NVKAK Q+KEGIPP Q     AGKQ EDGRT
Sbjct: 1   MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 55



 Score = 95.1 bits (235), Expect = 5e-18
 Identities = 55/98 (56%), Positives = 66/98 (67%), Gaps = 10/98 (10%)
 Frame = +1

Query: 1   KGIPLDQHRLICVGW------TVFDCNINKASTLYLVLFHLGGMEIYVKTVTGRTATLAI 162
           +GIP DQ RLI  G       T+ D NI K STL+LVL   GGM+I+VKT+TG+T TL +
Sbjct: 414 EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEV 473

Query: 163 GSFEIIDNVKAKTQEKEGIPPGQS----AGKQFEDGRT 264
              + I+NVKAK Q+KEGIPP Q     AGKQ EDGRT
Sbjct: 474 EPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 511



 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 34/43 (79%), Positives = 38/43 (88%)
 Frame = +2

Query: 329 MQIFLKTLTGKTVTLEVERTNNINNVKAKIQDIEGISPDQQRL 457
           MQIF+KTLTGKT+TLEVE ++ I NVKAKIQD EGI PDQQRL
Sbjct: 1   MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 43


>ref|XP_002888365.1| polyubiquitin [Arabidopsis lyrata subsp. lyrata]
           gi|297334206|gb|EFH64624.1| polyubiquitin [Arabidopsis
           lyrata subsp. lyrata]
          Length = 458

 Score = 99.0 bits (245), Expect(2) = 3e-36
 Identities = 58/98 (59%), Positives = 67/98 (68%), Gaps = 10/98 (10%)
 Frame = +1

Query: 1   KGIPLDQHRLICVGW------TVFDCNINKASTLYLVLFHLGGMEIYVKTVTGRTATLAI 162
           +GIP DQ RLI  G       T+ D NI K STL+LVL   GGM+I+VKT+TG+T TL I
Sbjct: 186 EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEI 245

Query: 163 GSFEIIDNVKAKTQEKEGIPPGQS----AGKQFEDGRT 264
            S + IDNVKAK Q+KEGIPP Q     AGKQ EDGRT
Sbjct: 246 ESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 283



 Score = 78.2 bits (191), Expect(2) = 3e-36
 Identities = 43/61 (70%), Positives = 49/61 (80%), Gaps = 1/61 (1%)
 Frame = +2

Query: 278 YSIQ-ESILLFFSCLCGGMQIFLKTLTGKTVTLEVERTNNINNVKAKIQDIEGISPDQQR 454
           Y+IQ ES L     L GGMQIF+KTLTGKT+TLEVE ++ I+NVKAKIQD EGI PDQQR
Sbjct: 287 YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQR 346

Query: 455 L 457
           L
Sbjct: 347 L 347



 Score = 98.6 bits (244), Expect = 5e-19
 Identities = 57/98 (58%), Positives = 67/98 (68%), Gaps = 10/98 (10%)
 Frame = +1

Query: 1   KGIPLDQHRLICVGW------TVFDCNINKASTLYLVLFHLGGMEIYVKTVTGRTATLAI 162
           +GIP DQ RLI  G       T+ D NI K STL+LVL   GGM+I+VKT+TG+T TL +
Sbjct: 34  EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEV 93

Query: 163 GSFEIIDNVKAKTQEKEGIPPGQS----AGKQFEDGRT 264
            S + IDNVKAK Q+KEGIPP Q     AGKQ EDGRT
Sbjct: 94  ESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131



 Score = 98.6 bits (244), Expect = 5e-19
 Identities = 57/98 (58%), Positives = 67/98 (68%), Gaps = 10/98 (10%)
 Frame = +1

Query: 1   KGIPLDQHRLICVGW------TVFDCNINKASTLYLVLFHLGGMEIYVKTVTGRTATLAI 162
           +GIP DQ RLI  G       T+ D NI K STL+LVL   GGM+I+VKT+TG+T TL +
Sbjct: 110 EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEV 169

Query: 163 GSFEIIDNVKAKTQEKEGIPPGQS----AGKQFEDGRT 264
            S + IDNVKAK Q+KEGIPP Q     AGKQ EDGRT
Sbjct: 170 ESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 207



 Score = 98.6 bits (244), Expect = 5e-19
 Identities = 57/98 (58%), Positives = 67/98 (68%), Gaps = 10/98 (10%)
 Frame = +1

Query: 1   KGIPLDQHRLICVGW------TVFDCNINKASTLYLVLFHLGGMEIYVKTVTGRTATLAI 162
           +GIP DQ RLI  G       T+ D NI K STL+LVL   GGM+I+VKT+TG+T TL +
Sbjct: 262 EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEV 321

Query: 163 GSFEIIDNVKAKTQEKEGIPPGQS----AGKQFEDGRT 264
            S + IDNVKAK Q+KEGIPP Q     AGKQ EDGRT
Sbjct: 322 ESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 359



 Score = 98.6 bits (244), Expect = 5e-19
 Identities = 57/98 (58%), Positives = 67/98 (68%), Gaps = 10/98 (10%)
 Frame = +1

Query: 1   KGIPLDQHRLICVGW------TVFDCNINKASTLYLVLFHLGGMEIYVKTVTGRTATLAI 162
           +GIP DQ RLI  G       T+ D NI K STL+LVL   GGM+I+VKT+TG+T TL +
Sbjct: 338 EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEV 397

Query: 163 GSFEIIDNVKAKTQEKEGIPPGQS----AGKQFEDGRT 264
            S + IDNVKAK Q+KEGIPP Q     AGKQ EDGRT
Sbjct: 398 ESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 435



 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 52/103 (50%), Positives = 62/103 (60%), Gaps = 6/103 (5%)
 Frame = +2

Query: 167 VSKSSTMSRPKLR---KRKVSLQASRLESSSKM--GGPPPTSYSIQ-ESILLFFSCLCGG 328
           V  S T+   K +   K  +     RL  + K    G     Y+IQ ES L     L GG
Sbjct: 17  VESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76

Query: 329 MQIFLKTLTGKTVTLEVERTNNINNVKAKIQDIEGISPDQQRL 457
           MQIF+KTLTGKT+TLEVE ++ I+NVKAKIQD EGI PDQQRL
Sbjct: 77  MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 119



 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 52/103 (50%), Positives = 62/103 (60%), Gaps = 6/103 (5%)
 Frame = +2

Query: 167 VSKSSTMSRPKLR---KRKVSLQASRLESSSKM--GGPPPTSYSIQ-ESILLFFSCLCGG 328
           V  S T+   K +   K  +     RL  + K    G     Y+IQ ES L     L GG
Sbjct: 93  VESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 152

Query: 329 MQIFLKTLTGKTVTLEVERTNNINNVKAKIQDIEGISPDQQRL 457
           MQIF+KTLTGKT+TLEVE ++ I+NVKAKIQD EGI PDQQRL
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 195



 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 52/103 (50%), Positives = 62/103 (60%), Gaps = 6/103 (5%)
 Frame = +2

Query: 167 VSKSSTMSRPKLR---KRKVSLQASRLESSSKM--GGPPPTSYSIQ-ESILLFFSCLCGG 328
           V  S T+   K +   K  +     RL  + K    G     Y+IQ ES L     L GG
Sbjct: 321 VESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 380

Query: 329 MQIFLKTLTGKTVTLEVERTNNINNVKAKIQDIEGISPDQQRL 457
           MQIF+KTLTGKT+TLEVE ++ I+NVKAKIQD EGI PDQQRL
Sbjct: 381 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 423



 Score = 78.2 bits (191), Expect = 6e-13
 Identities = 51/103 (49%), Positives = 62/103 (60%), Gaps = 6/103 (5%)
 Frame = +2

Query: 167 VSKSSTMSRPKLR---KRKVSLQASRLESSSKM--GGPPPTSYSIQ-ESILLFFSCLCGG 328
           V  S T+   K +   K  +     RL  + K    G     Y+IQ ES L     L GG
Sbjct: 169 VESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 228

Query: 329 MQIFLKTLTGKTVTLEVERTNNINNVKAKIQDIEGISPDQQRL 457
           MQIF+KTLTGKT+TLE+E ++ I+NVKAKIQD EGI PDQQRL
Sbjct: 229 MQIFVKTLTGKTITLEIESSDTIDNVKAKIQDKEGIPPDQQRL 271



 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 34/43 (79%), Positives = 39/43 (90%)
 Frame = +2

Query: 329 MQIFLKTLTGKTVTLEVERTNNINNVKAKIQDIEGISPDQQRL 457
           MQIF+KTLTGKT+TLEVE ++ I+NVKAKIQD EGI PDQQRL
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 43



 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 35/55 (63%), Positives = 42/55 (76%), Gaps = 4/55 (7%)
 Frame = +1

Query: 112 MEIYVKTVTGRTATLAIGSFEIIDNVKAKTQEKEGIPPGQS----AGKQFEDGRT 264
           M+I+VKT+TG+T TL + S + IDNVKAK Q+KEGIPP Q     AGKQ EDGRT
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 55


>gb|AAC67552.1| polyubiquitin [Saccharum hybrid cultivar H32-8560]
          Length = 381

 Score = 98.6 bits (244), Expect(2) = 4e-36
 Identities = 57/98 (58%), Positives = 67/98 (68%), Gaps = 10/98 (10%)
 Frame = +1

Query: 1   KGIPLDQHRLICVGW------TVFDCNINKASTLYLVLFHLGGMEIYVKTVTGRTATLAI 162
           +GIP DQ RLI  G       T+ D NI K STL+LVL   GGM+I+VKT+TG+T TL +
Sbjct: 34  EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEV 93

Query: 163 GSFEIIDNVKAKTQEKEGIPPGQS----AGKQFEDGRT 264
            S + IDNVKAK Q+KEGIPP Q     AGKQ EDGRT
Sbjct: 94  ESSDTIDNVKAKIQDKEGIPPDQQRXIFAGKQLEDGRT 131



 Score = 78.2 bits (191), Expect(2) = 4e-36
 Identities = 43/61 (70%), Positives = 49/61 (80%), Gaps = 1/61 (1%)
 Frame = +2

Query: 278 YSIQ-ESILLFFSCLCGGMQIFLKTLTGKTVTLEVERTNNINNVKAKIQDIEGISPDQQR 454
           Y+IQ ES L     L GGMQIF+KTLTGKT+TLEVE ++ I+NVKAKIQD EGI PDQQR
Sbjct: 135 YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQR 194

Query: 455 L 457
           L
Sbjct: 195 L 195



 Score = 95.9 bits (237), Expect(2) = 2e-35
 Identities = 56/98 (57%), Positives = 66/98 (67%), Gaps = 10/98 (10%)
 Frame = +1

Query: 1   KGIPLDQHRLICVGWTVFD------CNINKASTLYLVLFHLGGMEIYVKTVTGRTATLAI 162
           +GIP DQ RLI  G  + D       NI K STL+LVL   GGM+I+VKT+TG+T TL +
Sbjct: 186 EGIPPDQQRLIFAGKQLEDGRTLAXYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEV 245

Query: 163 GSFEIIDNVKAKTQEKEGIPPGQS----AGKQFEDGRT 264
            S + IDNVKAK Q+KEGIPP Q     AGKQ EDGRT
Sbjct: 246 ESSDTIDNVKAKIQDKEGIPPDQQRXIFAGKQLEDGRT 283



 Score = 78.2 bits (191), Expect(2) = 2e-35
 Identities = 43/61 (70%), Positives = 49/61 (80%), Gaps = 1/61 (1%)
 Frame = +2

Query: 278 YSIQ-ESILLFFSCLCGGMQIFLKTLTGKTVTLEVERTNNINNVKAKIQDIEGISPDQQR 454
           Y+IQ ES L     L GGMQIF+KTLTGKT+TLEVE ++ I+NVKAKIQD EGI PDQQR
Sbjct: 287 YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQR 346

Query: 455 L 457
           L
Sbjct: 347 L 347



 Score = 96.7 bits (239), Expect(2) = 4e-35
 Identities = 56/98 (57%), Positives = 66/98 (67%), Gaps = 10/98 (10%)
 Frame = +1

Query: 1   KGIPLDQHRLICVGW------TVFDCNINKASTLYLVLFHLGGMEIYVKTVTGRTATLAI 162
           +GIP DQ R I  G       T+ D NI K STL+LVL   GGM+I+VKT+TG+T TL +
Sbjct: 110 EGIPPDQQRXIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEV 169

Query: 163 GSFEIIDNVKAKTQEKEGIPPGQS----AGKQFEDGRT 264
            S + IDNVKAK Q+KEGIPP Q     AGKQ EDGRT
Sbjct: 170 ESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 207



 Score = 76.6 bits (187), Expect(2) = 4e-35
 Identities = 42/60 (70%), Positives = 48/60 (80%), Gaps = 1/60 (1%)
 Frame = +2

Query: 278 YSIQ-ESILLFFSCLCGGMQIFLKTLTGKTVTLEVERTNNINNVKAKIQDIEGISPDQQR 454
           Y+IQ ES L     L GGMQIF+KTLTGKT+TLEVE ++ I+NVKAKIQD EGI PDQQR
Sbjct: 211 YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQR 270



 Score = 94.0 bits (232), Expect = 1e-17
 Identities = 55/98 (56%), Positives = 65/98 (66%), Gaps = 10/98 (10%)
 Frame = +1

Query: 1   KGIPLDQHRLICVGWTVFD------CNINKASTLYLVLFHLGGMEIYVKTVTGRTATLAI 162
           +GIP DQ R I  G  + D       NI K STL+LVL   GGM+I+VKT+TG+T TL +
Sbjct: 262 EGIPPDQQRXIFAGKQLEDGRTLAXYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEV 321

Query: 163 GSFEIIDNVKAKTQEKEGIPPGQS----AGKQFEDGRT 264
            S + IDNVKAK Q+KEGIPP Q     AGKQ EDGRT
Sbjct: 322 ESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 359



 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 51/102 (50%), Positives = 61/102 (59%), Gaps = 6/102 (5%)
 Frame = +2

Query: 167 VSKSSTMSRPKLR---KRKVSLQASRLESSSKM--GGPPPTSYSIQ-ESILLFFSCLCGG 328
           V  S T+   K +   K  +     RL  + K    G     Y+IQ ES L     L GG
Sbjct: 17  VESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76

Query: 329 MQIFLKTLTGKTVTLEVERTNNINNVKAKIQDIEGISPDQQR 454
           MQIF+KTLTGKT+TLEVE ++ I+NVKAKIQD EGI PDQQR
Sbjct: 77  MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQR 118



 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 34/43 (79%), Positives = 39/43 (90%)
 Frame = +2

Query: 329 MQIFLKTLTGKTVTLEVERTNNINNVKAKIQDIEGISPDQQRL 457
           MQIF+KTLTGKT+TLEVE ++ I+NVKAKIQD EGI PDQQRL
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 43



 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 35/55 (63%), Positives = 42/55 (76%), Gaps = 4/55 (7%)
 Frame = +1

Query: 112 MEIYVKTVTGRTATLAIGSFEIIDNVKAKTQEKEGIPPGQS----AGKQFEDGRT 264
           M+I+VKT+TG+T TL + S + IDNVKAK Q+KEGIPP Q     AGKQ EDGRT
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 55


>gb|AAB95252.1| ubiquitin [Arabidopsis thaliana]
          Length = 380

 Score = 98.6 bits (244), Expect(2) = 4e-36
 Identities = 57/98 (58%), Positives = 67/98 (68%), Gaps = 10/98 (10%)
 Frame = +1

Query: 1   KGIPLDQHRLICVGW------TVFDCNINKASTLYLVLFHLGGMEIYVKTVTGRTATLAI 162
           +GIP DQ RLI  G       T+ D NI K STL+LVL   GGM+I+VKT+TG+T TL +
Sbjct: 34  EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEV 93

Query: 163 GSFEIIDNVKAKTQEKEGIPPGQS----AGKQFEDGRT 264
            S + IDNVKAK Q+KEGIPP Q     AGKQ EDGRT
Sbjct: 94  ESSDTIDNVKAKIQDKEGIPPDQQWLIFAGKQLEDGRT 131



 Score = 78.2 bits (191), Expect(2) = 4e-36
 Identities = 43/61 (70%), Positives = 49/61 (80%), Gaps = 1/61 (1%)
 Frame = +2

Query: 278 YSIQ-ESILLFFSCLCGGMQIFLKTLTGKTVTLEVERTNNINNVKAKIQDIEGISPDQQR 454
           Y+IQ ES L     L GGMQIF+KTLTGKT+TLEVE ++ I+NVKAKIQD EGI PDQQR
Sbjct: 135 YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQR 194

Query: 455 L 457
           L
Sbjct: 195 L 195



 Score = 98.6 bits (244), Expect = 5e-19
 Identities = 57/98 (58%), Positives = 67/98 (68%), Gaps = 10/98 (10%)
 Frame = +1

Query: 1   KGIPLDQHRLICVGW------TVFDCNINKASTLYLVLFHLGGMEIYVKTVTGRTATLAI 162
           +GIP DQ RLI  G       T+ D NI K STL+LVL   GGM+I+VKT+TG+T TL +
Sbjct: 186 EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEV 245

Query: 163 GSFEIIDNVKAKTQEKEGIPPGQS----AGKQFEDGRT 264
            S + IDNVKAK Q+KEGIPP Q     AGKQ EDGRT
Sbjct: 246 ESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 283



 Score = 98.6 bits (244), Expect = 5e-19
 Identities = 57/98 (58%), Positives = 67/98 (68%), Gaps = 10/98 (10%)
 Frame = +1

Query: 1   KGIPLDQHRLICVGW------TVFDCNINKASTLYLVLFHLGGMEIYVKTVTGRTATLAI 162
           +GIP DQ RLI  G       T+ D NI K STL+LVL   GGM+I+VKT+TG+T TL +
Sbjct: 262 EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEV 321

Query: 163 GSFEIIDNVKAKTQEKEGIPPGQS----AGKQFEDGRT 264
            S + IDNVKAK Q+KEGIPP Q     AGKQ EDGRT
Sbjct: 322 ESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 359



 Score = 95.5 bits (236), Expect = 4e-18
 Identities = 56/98 (57%), Positives = 66/98 (67%), Gaps = 10/98 (10%)
 Frame = +1

Query: 1   KGIPLDQHRLICVGW------TVFDCNINKASTLYLVLFHLGGMEIYVKTVTGRTATLAI 162
           +GIP DQ  LI  G       T+ D NI K STL+LVL   GGM+I+VKT+TG+T TL +
Sbjct: 110 EGIPPDQQWLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEV 169

Query: 163 GSFEIIDNVKAKTQEKEGIPPGQS----AGKQFEDGRT 264
            S + IDNVKAK Q+KEGIPP Q     AGKQ EDGRT
Sbjct: 170 ESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 207



 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 52/103 (50%), Positives = 62/103 (60%), Gaps = 6/103 (5%)
 Frame = +2

Query: 167 VSKSSTMSRPKLR---KRKVSLQASRLESSSKM--GGPPPTSYSIQ-ESILLFFSCLCGG 328
           V  S T+   K +   K  +     RL  + K    G     Y+IQ ES L     L GG
Sbjct: 169 VESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 228

Query: 329 MQIFLKTLTGKTVTLEVERTNNINNVKAKIQDIEGISPDQQRL 457
           MQIF+KTLTGKT+TLEVE ++ I+NVKAKIQD EGI PDQQRL
Sbjct: 229 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 271



 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 52/103 (50%), Positives = 62/103 (60%), Gaps = 6/103 (5%)
 Frame = +2

Query: 167 VSKSSTMSRPKLR---KRKVSLQASRLESSSKM--GGPPPTSYSIQ-ESILLFFSCLCGG 328
           V  S T+   K +   K  +     RL  + K    G     Y+IQ ES L     L GG
Sbjct: 245 VESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 304

Query: 329 MQIFLKTLTGKTVTLEVERTNNINNVKAKIQDIEGISPDQQRL 457
           MQIF+KTLTGKT+TLEVE ++ I+NVKAKIQD EGI PDQQRL
Sbjct: 305 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 347



 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 51/103 (49%), Positives = 61/103 (59%), Gaps = 6/103 (5%)
 Frame = +2

Query: 167 VSKSSTMSRPKLR---KRKVSLQASRLESSSKM--GGPPPTSYSIQ-ESILLFFSCLCGG 328
           V  S T+   K +   K  +     RL  + K    G     Y+IQ ES L     L GG
Sbjct: 17  VESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76

Query: 329 MQIFLKTLTGKTVTLEVERTNNINNVKAKIQDIEGISPDQQRL 457
           MQIF+KTLTGKT+TLEVE ++ I+NVKAKIQD EGI PDQQ L
Sbjct: 77  MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQWL 119



 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 34/43 (79%), Positives = 39/43 (90%)
 Frame = +2

Query: 329 MQIFLKTLTGKTVTLEVERTNNINNVKAKIQDIEGISPDQQRL 457
           MQIF+KTLTGKT+TLEVE ++ I+NVKAKIQD EGI PDQQRL
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 43



 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 35/55 (63%), Positives = 42/55 (76%), Gaps = 4/55 (7%)
 Frame = +1

Query: 112 MEIYVKTVTGRTATLAIGSFEIIDNVKAKTQEKEGIPPGQS----AGKQFEDGRT 264
           M+I+VKT+TG+T TL + S + IDNVKAK Q+KEGIPP Q     AGKQ EDGRT
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 55