BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00017222
         (746 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278441.2| PREDICTED: nuclear transcription factor Y su...    99   7e-19
ref|XP_001760371.1| predicted protein [Physcomitrella patens sub...    96   1e-17
emb|CAM32010.1| YA5 [Petunia x hybrida]                                93   5e-17
emb|CAM32012.1| YA2 [Petunia x hybrida]                                92   9e-17
gb|AFK49646.1| nuclear transcription factor Y subunit A4 [Medica...    92   1e-16

>ref|XP_002278441.2| PREDICTED: nuclear transcription factor Y subunit A-3-like [Vitis
           vinifera]
          Length = 350

 Score = 99.4 bits (246), Expect = 7e-19
 Identities = 58/126 (46%), Positives = 70/126 (55%)
 Frame = +1

Query: 1   SRAKLEARNKLIKDRKPYLHESRHLHALNRARGCGGRFLNTKLEQSKTPFTNDGENASSE 180
           SRAK+EA+NKL+K RKPYLHESRHLHALNR RG GGRFL+TK  Q     +N G ++ S 
Sbjct: 208 SRAKMEAQNKLVKARKPYLHESRHLHALNRVRGSGGRFLSTKKLQEPDSTSNAGCHSVSG 267

Query: 181 SSLVQTGGNFSGSGVSQSVTGNMESYITXXXXXXXXXXKDNMHPPSNPRLSGYHPPMGTN 360
           S      G+ +   V QS TG   +  T           D +      R SG  P MG  
Sbjct: 268 SGHFHQKGDTTEYEVHQSDTGKFVASTTSSSDVTSVSNSDVLFRQPEHRFSGMSPHMGGA 327

Query: 361 IQDGGG 378
           +Q GGG
Sbjct: 328 MQGGGG 333


>ref|XP_001760371.1| predicted protein [Physcomitrella patens subsp. patens]
           gi|162688385|gb|EDQ74762.1| predicted protein
           [Physcomitrella patens subsp. patens]
          Length = 552

 Score = 95.5 bits (236), Expect = 1e-17
 Identities = 58/131 (44%), Positives = 71/131 (54%), Gaps = 6/131 (4%)
 Frame = +1

Query: 1   SRAKLEARNKLIKDRKPYLHESRHLHALNRARGCGGRFLNTKLEQSKTPFTNDGENASSE 180
           SRAK E+ NKLIK RKPYLHESRH HAL RARG GGRFLNTK ++  +   +DG + S E
Sbjct: 207 SRAKAESENKLIKSRKPYLHESRHQHALRRARGNGGRFLNTKAKEGDSKSNSDGNHGSHE 266

Query: 181 SSLVQTGG----NFSGSGVSQ-SVTGNMESYITXXXXXXXXXXKDNMHPPSNPRLSGYHP 345
               Q G       S SG+   S  G+  +Y              N+HPP +   S +H 
Sbjct: 267 GQSSQAGNVSSTRASHSGMDMLSGQGDSVNYHNTMMQHGQNNAYLNLHPPQSFHSSAFHT 326

Query: 346 -PMGTNIQDGG 375
            P G+   DGG
Sbjct: 327 LPGGSESGDGG 337


>emb|CAM32010.1| YA5 [Petunia x hybrida]
          Length = 132

 Score = 93.2 bits (230), Expect = 5e-17
 Identities = 56/139 (40%), Positives = 73/139 (52%)
 Frame = +1

Query: 4   RAKLEARNKLIKDRKPYLHESRHLHALNRARGCGGRFLNTKLEQSKTPFTNDGENASSES 183
           RAKLEA+NKL+K+RKPYLHESRHLHA+NR RG GGRFL+TK      P T    + SS  
Sbjct: 13  RAKLEAQNKLVKNRKPYLHESRHLHAVNRVRGTGGRFLSTKKGHHSDPIT-PTNSTSSRD 71

Query: 184 SLVQTGGNFSGSGVSQSVTGNMESYITXXXXXXXXXXKDNMHPPSNPRLSGYHPPMGTNI 363
           S+ + G   + S V Q V   +                 +   P + R       M   +
Sbjct: 72  SVEREGSTSAFSSVRQDVHNGI-----------------SFQQPDH-RAFNVSSHMDVTM 113

Query: 364 QDGGGIICNGSQRRVLAIQ 420
           QD GG  CNG+Q+R   ++
Sbjct: 114 QDRGGFTCNGTQQRAPVVR 132


>emb|CAM32012.1| YA2 [Petunia x hybrida]
          Length = 140

 Score = 92.4 bits (228), Expect = 9e-17
 Identities = 55/132 (41%), Positives = 73/132 (55%), Gaps = 1/132 (0%)
 Frame = +1

Query: 4   RAKLEARNKLIKDRKPYLHESRHLHALNRARGCGGRFLNTK-LEQSKTPFTNDGENASSE 180
           RAKLEA+NKL+KDRKPYLHESRH HA+ RARG GGRFLNTK ++QS+       +N   +
Sbjct: 13  RAKLEAQNKLVKDRKPYLHESRHRHAMKRARGSGGRFLNTKNMQQSRPSSPKYDKNIFKQ 72

Query: 181 SSLVQTGGNFSGSGVSQSVTGNMESYITXXXXXXXXXXKDNMHPPSNPRLSGYHPPMGTN 360
                TGGNFS S V  S +G+  +              D+M      R+S +   M   
Sbjct: 73  ----HTGGNFSSSMVQHSESGSWGTSTQSGSDVTSIFSGDDMFQQPEFRVSSFPFHMAAT 128

Query: 361 IQDGGGIICNGS 396
           +Q+    +  G+
Sbjct: 129 MQEAEDFMRGGT 140


>gb|AFK49646.1| nuclear transcription factor Y subunit A4 [Medicago truncatula]
          Length = 347

 Score = 91.7 bits (226), Expect = 1e-16
 Identities = 46/71 (64%), Positives = 53/71 (74%), Gaps = 1/71 (1%)
 Frame = +1

Query: 4   RAKLEARNKLIKDRKPYLHESRHLHALNRARGCGGRFLNT-KLEQSKTPFTNDGENASSE 180
           RAKLEA NKLIKDRKPYLHESRH+HAL RARG GGRFLN  KL++SK    N G+N S+ 
Sbjct: 207 RAKLEAHNKLIKDRKPYLHESRHVHALKRARGAGGRFLNAKKLQESKLDSPNHGQNVSTG 266

Query: 181 SSLVQTGGNFS 213
            + +   GN S
Sbjct: 267 YTCLNLNGNMS 277