BLASTX nr result
ID: Coptis23_contig00017221
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis23_contig00017221
(1328 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002279606.2| PREDICTED: ATP-dependent DNA helicase Q-like... 392 e-106
emb|CBI39502.3| unnamed protein product [Vitis vinifera] 377 e-102
ref|XP_002330211.1| predicted protein [Populus trichocarpa] gi|2... 360 3e-97
ref|XP_004167539.1| PREDICTED: LOW QUALITY PROTEIN: ATP-dependen... 349 1e-93
ref|XP_004144821.1| PREDICTED: ATP-dependent DNA helicase Q-like... 349 1e-93
>ref|XP_002279606.2| PREDICTED: ATP-dependent DNA helicase Q-like SIM-like [Vitis
vinifera]
Length = 893
Score = 392 bits (1007), Expect = e-106
Identities = 192/304 (63%), Positives = 233/304 (76%), Gaps = 5/304 (1%)
Frame = -1
Query: 1328 AFGMGIDKSNVRRIIHYGWPQSLEAYYQEAGRAGRDGKLADCVLFANXXXXXXXXXXXXS 1149
AFGMGIDK NVRRIIHYGWPQSLEAYYQEAGRAGRDGKLADC+L+AN S
Sbjct: 590 AFGMGIDKLNVRRIIHYGWPQSLEAYYQEAGRAGRDGKLADCILYANLSRVPTLLPSQRS 649
Query: 1148 EEQTKQAYRMLSDCFRYGMSTATCRVKTLVEYFGENFDYENCLLCDVCVNGPPKLQNLKE 969
E+QTKQAY+MLSDCFRYGM+T CR KTLVEYFGE+F +++C+LCDVCVNGPP+ QNLK+
Sbjct: 650 EDQTKQAYKMLSDCFRYGMNTTCCRAKTLVEYFGEDFCHQSCILCDVCVNGPPEKQNLKD 709
Query: 968 EADIFIRVLASYYAPTSYGNDSFDSTISGG----RLREKPNFRMLISRIREQFPKFVASD 801
EAD F+ V+A++Y +S+ +D +D I G R +KPN RML+SRIREQF KF A+D
Sbjct: 710 EADTFMHVIAAHYGKSSFVDDLYDGVIYGDVEQQRFMDKPNLRMLVSRIREQFQKFAATD 769
Query: 800 QLWWQGLARLLEDQGFIRDGDDKKRVTAKFPEPTELGLNFLQSGIENSFLVYPEADMLLS 621
LWW+GLAR++ED+G+IR+G+D+ V KFP+PT+LGL FLQS E +F VYP+ADMLLS
Sbjct: 770 LLWWRGLARIMEDKGYIREGEDRIHVQIKFPKPTKLGLEFLQSTTEQTFDVYPQADMLLS 829
Query: 620 LQKKKSYSTFSDWGKGWADPEIXXXXXXXXXXXRNTGKRPSRR-QPDLGTVRGRLAEKLS 444
+ KSYSTFS+WGKGWADPEI R KR SR+ QP++ T RGRLA KL
Sbjct: 830 TRNPKSYSTFSEWGKGWADPEIRRQRLERRRSQRKPRKRKSRKHQPNMKTARGRLAAKLL 889
Query: 443 TKKR 432
+KR
Sbjct: 890 IQKR 893
>emb|CBI39502.3| unnamed protein product [Vitis vinifera]
Length = 1537
Score = 377 bits (968), Expect = e-102
Identities = 183/292 (62%), Positives = 224/292 (76%), Gaps = 5/292 (1%)
Frame = -1
Query: 1328 AFGMGIDKSNVRRIIHYGWPQSLEAYYQEAGRAGRDGKLADCVLFANXXXXXXXXXXXXS 1149
AFGMGIDK NVRRIIHYGWPQSLEAYYQEAGRAGRDGKLADC+L+AN S
Sbjct: 549 AFGMGIDKLNVRRIIHYGWPQSLEAYYQEAGRAGRDGKLADCILYANLSRVPTLLPSQRS 608
Query: 1148 EEQTKQAYRMLSDCFRYGMSTATCRVKTLVEYFGENFDYENCLLCDVCVNGPPKLQNLKE 969
E+QTKQAY+MLSDCFRYGM+T CR KTLVEYFGE+F +++C+LCDVCVNGPP+ QNLK+
Sbjct: 609 EDQTKQAYKMLSDCFRYGMNTTCCRAKTLVEYFGEDFCHQSCILCDVCVNGPPEKQNLKD 668
Query: 968 EADIFIRVLASYYAPTSYGNDSFDSTISGG----RLREKPNFRMLISRIREQFPKFVASD 801
EAD F+ V+A++Y +S+ +D +D I G R +KPN RML+SRIREQF KF A+D
Sbjct: 669 EADTFMHVIAAHYGKSSFVDDLYDGVIYGDVEQQRFMDKPNLRMLVSRIREQFQKFAATD 728
Query: 800 QLWWQGLARLLEDQGFIRDGDDKKRVTAKFPEPTELGLNFLQSGIENSFLVYPEADMLLS 621
LWW+GLAR++ED+G+IR+G+D+ V KFP+PT+LGL FLQS E +F VYP+ADMLLS
Sbjct: 729 LLWWRGLARIMEDKGYIREGEDRIHVQIKFPKPTKLGLEFLQSTTEQTFDVYPQADMLLS 788
Query: 620 LQKKKSYSTFSDWGKGWADPEIXXXXXXXXXXXRNTGKRPSRR-QPDLGTVR 468
+ KSYSTFS+WGKGWADPEI R KR SR+ QP++ T +
Sbjct: 789 TRNPKSYSTFSEWGKGWADPEIRRQRLERRRSQRKPRKRKSRKHQPNMKTAQ 840
>ref|XP_002330211.1| predicted protein [Populus trichocarpa] gi|222871667|gb|EEF08798.1|
predicted protein [Populus trichocarpa]
Length = 1048
Score = 360 bits (925), Expect = 3e-97
Identities = 180/310 (58%), Positives = 224/310 (72%), Gaps = 12/310 (3%)
Frame = -1
Query: 1328 AFGMGIDKSNVRRIIHYGWPQSLEAYYQEAGRAGRDGKLADCVLFANXXXXXXXXXXXXS 1149
AFGMGIDKSN+RRIIHYGWPQSLEAYYQEAGRAGRDGKLA+CVL+AN S
Sbjct: 590 AFGMGIDKSNIRRIIHYGWPQSLEAYYQEAGRAGRDGKLAECVLYANLSRTPSLLPSKRS 649
Query: 1148 EEQTKQAYRMLSDCFRYGMSTATCRVKTLVEYFGENFDYENCLLCDVCVNGPPKLQNLKE 969
E QTK A++MLSDCFRYGM+T+ CR KTLVEYFGE+F YE CLLCDVCVNGPP++Q+LKE
Sbjct: 650 EAQTKHAFKMLSDCFRYGMNTSCCRAKTLVEYFGEDFSYEKCLLCDVCVNGPPEMQDLKE 709
Query: 968 EADIFIRVLASYYAPTSYGNDSFDSTISG-------GRLREKPNFRMLISRIREQFPKFV 810
EADI ++V+A+Y+ S N SFDS+ G R +KPN RM +++I+EQ+ KF
Sbjct: 710 EADILMKVIAAYH--LSEQNHSFDSSYDGKCNDTKSQRAVQKPNLRMFVTKIKEQYQKFW 767
Query: 809 ASDQLWWQGLARLLEDQGFIRDGDDKKRVTAKFPEPTELGLNFLQSGIENSFLVYPEADM 630
+DQLWWQGLAR++E +G+IR+GD+K V K PEPT+LGL++L+ E VYPEADM
Sbjct: 768 TTDQLWWQGLARIMEGKGYIREGDEKSHVQIKCPEPTKLGLDYLEYDREQPLSVYPEADM 827
Query: 629 LLSLQKKKSYSTFSDWGKGWADPEIXXXXXXXXXXXRNTGK-----RPSRRQPDLGTVRG 465
LS+ K KSYS+F++WGKGWADPEI R K + + + D T RG
Sbjct: 828 QLSVNKHKSYSSFAEWGKGWADPEIRRQRLERKQSNRKPRKPRRTRKSGKMKLDFKTARG 887
Query: 464 RLAEKLSTKK 435
R+A KL +K+
Sbjct: 888 RIAAKLFSKQ 897
>ref|XP_004167539.1| PREDICTED: LOW QUALITY PROTEIN: ATP-dependent DNA helicase Q-like
SIM-like [Cucumis sativus]
Length = 821
Score = 349 bits (895), Expect = 1e-93
Identities = 182/311 (58%), Positives = 218/311 (70%), Gaps = 13/311 (4%)
Frame = -1
Query: 1328 AFGMGIDKSNVRRIIHYGWPQSLEAYYQEAGRAGRDGKLADCVLFANXXXXXXXXXXXXS 1149
AFGMGIDKSNVRRIIHYGWPQSLEAYYQEAGRAGRDGKLADC+L+AN S
Sbjct: 514 AFGMGIDKSNVRRIIHYGWPQSLEAYYQEAGRAGRDGKLADCILYANLTRIPSLLPSRRS 573
Query: 1148 EEQTKQAYRMLSDCFRYGMSTATCRVKTLVEYFGENFDYENCLLCDVCVNGPPKLQNLKE 969
EEQT QAYRMLSDCFRYGM+T+ CR + LVEYFGE FD E CL+CDVCV GPP +QNLKE
Sbjct: 574 EEQTNQAYRMLSDCFRYGMNTSNCRAQKLVEYFGETFDREKCLMCDVCVKGPPNMQNLKE 633
Query: 968 EADIFIRVLASYYA-PTSYGNDSFDSTISGGRLREKPNFRMLISRIREQFPKFVASDQLW 792
E+DI ++ +A+++ SY N S+ R REKPN R +S++REQ KF A+D LW
Sbjct: 634 ESDILMQAIAAHHVKEASYDNFSYSDV--KHRSREKPNLRFFVSKVREQTLKFAATDILW 691
Query: 791 WQGLARLLEDQGFIRDGDDKKRVTAKFPEPTELGLNFLQSGIENSFLVYPEADMLLSLQK 612
W+GLAR+LE +G++++GD K V KFPE T+LGL FL S + +F VYPE+DMLLS+ K
Sbjct: 692 WRGLARILEYKGYLKEGDHKIHVQIKFPELTKLGLEFL-SRSDQTFNVYPESDMLLSMAK 750
Query: 611 KKSYSTFSDWGKGWADPEIXXXXXXXXXXXRNTG-----------KRPSRRQP-DLGTVR 468
KS+S+FS+WGKGWADP I + KR SR+Q D TVR
Sbjct: 751 PKSFSSFSEWGKGWADPAIRRERLKRRRQFVDKSQGPRSRSRKPRKRKSRKQNFDSKTVR 810
Query: 467 GRLAEKLSTKK 435
GRL KLS KK
Sbjct: 811 GRLTAKLSIKK 821
>ref|XP_004144821.1| PREDICTED: ATP-dependent DNA helicase Q-like SIM-like [Cucumis
sativus]
Length = 821
Score = 349 bits (895), Expect = 1e-93
Identities = 182/311 (58%), Positives = 218/311 (70%), Gaps = 13/311 (4%)
Frame = -1
Query: 1328 AFGMGIDKSNVRRIIHYGWPQSLEAYYQEAGRAGRDGKLADCVLFANXXXXXXXXXXXXS 1149
AFGMGIDKSNVRRIIHYGWPQSLEAYYQEAGRAGRDGKLADC+L+AN S
Sbjct: 514 AFGMGIDKSNVRRIIHYGWPQSLEAYYQEAGRAGRDGKLADCILYANLTRIPSLLPSRRS 573
Query: 1148 EEQTKQAYRMLSDCFRYGMSTATCRVKTLVEYFGENFDYENCLLCDVCVNGPPKLQNLKE 969
EEQT QAYRMLSDCFRYGM+T+ CR + LVEYFGE FD E CL+CDVCV GPP +QNLKE
Sbjct: 574 EEQTNQAYRMLSDCFRYGMNTSNCRAQKLVEYFGETFDREKCLMCDVCVKGPPNMQNLKE 633
Query: 968 EADIFIRVLASYYA-PTSYGNDSFDSTISGGRLREKPNFRMLISRIREQFPKFVASDQLW 792
E+DI ++ +A+++ SY N S+ R REKPN R +S++REQ KF A+D LW
Sbjct: 634 ESDILMQAIAAHHVKEASYDNFSYSDV--KHRSREKPNLRFFVSKVREQTLKFAATDILW 691
Query: 791 WQGLARLLEDQGFIRDGDDKKRVTAKFPEPTELGLNFLQSGIENSFLVYPEADMLLSLQK 612
W+GLAR+LE +G++++GD K V KFPE T+LGL FL S + +F VYPE+DMLLS+ K
Sbjct: 692 WRGLARILEYKGYLKEGDHKIHVQIKFPELTKLGLEFL-SRSDQTFNVYPESDMLLSIAK 750
Query: 611 KKSYSTFSDWGKGWADPEIXXXXXXXXXXXRNTG-----------KRPSRRQP-DLGTVR 468
KS+S+FS+WGKGWADP I + KR SR+Q D TVR
Sbjct: 751 PKSFSSFSEWGKGWADPAIRRERLKRRRQFVDKSQGPRSRSRKPRKRKSRKQNFDSKTVR 810
Query: 467 GRLAEKLSTKK 435
GRL KLS KK
Sbjct: 811 GRLTAKLSIKK 821