BLASTX nr result

ID: Coptis23_contig00017218 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00017218
         (331 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACT88298.1| R2R3 MYB transcription factor [Vitis vinifera]          57   2e-06
gb|ACJ50529.1| R2R3 MYB 12 transcription factor [Vitis vinifera]       57   2e-06
ref|XP_002269995.1| PREDICTED: transcription factor MYB12 [Vitis...    57   2e-06
gb|ACV81697.1| MYBF1 [Vitis vinifera]                                  56   3e-06

>gb|ACT88298.1| R2R3 MYB transcription factor [Vitis vinifera]
          Length = 367

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 35/74 (47%), Positives = 42/74 (56%), Gaps = 7/74 (9%)
 Frame = -2

Query: 228 WYSSGSITSCFQDSDWVNWNWDG-VVEGPNLSHEGEELLSWLW-DSDNGEV-----GKMV 70
           W S  S TS F D     WNW+   V G  L  E EE+LSWLW DSD GEV     G  +
Sbjct: 299 WPSCSSPTSYFDD-----WNWESSAVNGQELWDEKEEMLSWLWEDSDGGEVECETFGGDL 353

Query: 69  EFEQEKALSAWLLS 28
           + E++ A+ AWLLS
Sbjct: 354 DCEKQNAMVAWLLS 367


>gb|ACJ50529.1| R2R3 MYB 12 transcription factor [Vitis vinifera]
          Length = 179

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 35/74 (47%), Positives = 42/74 (56%), Gaps = 7/74 (9%)
 Frame = -2

Query: 228 WYSSGSITSCFQDSDWVNWNWDG-VVEGPNLSHEGEELLSWLW-DSDNGEV-----GKMV 70
           W S  S TS F D     WNW+   V G  L  E EE+LSWLW DSD GEV     G  +
Sbjct: 111 WPSCSSPTSYFDD-----WNWESSAVNGQELWDEKEEMLSWLWEDSDGGEVECETFGGDL 165

Query: 69  EFEQEKALSAWLLS 28
           + E++ A+ AWLLS
Sbjct: 166 DCEKQNAMVAWLLS 179


>ref|XP_002269995.1| PREDICTED: transcription factor MYB12 [Vitis vinifera]
           gi|297743957|emb|CBI36927.3| unnamed protein product
           [Vitis vinifera]
          Length = 367

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 35/74 (47%), Positives = 42/74 (56%), Gaps = 7/74 (9%)
 Frame = -2

Query: 228 WYSSGSITSCFQDSDWVNWNWDG-VVEGPNLSHEGEELLSWLW-DSDNGEV-----GKMV 70
           W S  S TS F D     WNW+   V G  L  E EE+LSWLW DSD GEV     G  +
Sbjct: 299 WPSCSSPTSYFDD-----WNWESSAVNGQELWDEKEEMLSWLWEDSDGGEVECETFGGDL 353

Query: 69  EFEQEKALSAWLLS 28
           + E++ A+ AWLLS
Sbjct: 354 DCEKQNAMVAWLLS 367


>gb|ACV81697.1| MYBF1 [Vitis vinifera]
          Length = 367

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 35/74 (47%), Positives = 42/74 (56%), Gaps = 7/74 (9%)
 Frame = -2

Query: 228 WYSSGSITSCFQDSDWVNWNWDG-VVEGPNLSHEGEELLSWLW-DSDNGEV-----GKMV 70
           W S  S TS F D     WNW+   V G  L  E EE+LSWLW DSD GEV     G  +
Sbjct: 299 WPSCSSPTSYFDD-----WNWESSAVNGQELWDEKEEMLSWLWEDSDGGEVECETFGGDL 353

Query: 69  EFEQEKALSAWLLS 28
           + E++ A+ AWLLS
Sbjct: 354 DCEKQDAMVAWLLS 367


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