BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00017206
         (361 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002514774.1| cohesin subunit rad21, putative [Ricinus com...    49   4e-12
ref|XP_002265684.2| PREDICTED: uncharacterized protein LOC100263...    47   2e-11
emb|CBI23350.3| unnamed protein product [Vitis vinifera]               47   2e-11
ref|XP_002315112.1| predicted protein [Populus trichocarpa] gi|2...    46   1e-10
gb|AEY85029.1| cohesin subunit [Camellia sinensis]                     45   2e-09

>ref|XP_002514774.1| cohesin subunit rad21, putative [Ricinus communis]
           gi|223545825|gb|EEF47328.1| cohesin subunit rad21,
           putative [Ricinus communis]
          Length = 1247

 Score = 48.5 bits (114), Expect(2) = 4e-12
 Identities = 36/88 (40%), Positives = 49/88 (55%), Gaps = 3/88 (3%)
 Frame = -1

Query: 361 SVPASVPDAQNDLLAQFTPEKEVSEEG---GNGLKNPSGQKRQLMESALVQWYGSSTKLS 191
           S+P ++ D  +DLL + TP+KEV EEG   G G++  +G+KR   ESAL     +S +  
Sbjct: 587 SIPQTLLDKPHDLLVE-TPDKEVQEEGDGSGAGIRI-TGKKRSFAESALTVQSLNSVESF 644

Query: 190 GIPRSKRTVXXXXXXXXXXXXXLVGIKS 107
           G+ RSKRTV             LVG KS
Sbjct: 645 GVTRSKRTVESIPDDDDLLSSILVGRKS 672



 Score = 47.4 bits (111), Expect(2) = 4e-12
 Identities = 22/36 (61%), Positives = 27/36 (75%)
 Frame = -2

Query: 108 RSSALKLRPTPPPTEIASRKRPRITPRASVVKRKVL 1
           +SSALK++PTPP  E+ S KR R T R S +KRKVL
Sbjct: 671 KSSALKMKPTPPAPEVPSMKRARFTSRPSALKRKVL 706


>ref|XP_002265684.2| PREDICTED: uncharacterized protein LOC100263480 [Vitis vinifera]
          Length = 1335

 Score = 47.0 bits (110), Expect(2) = 2e-11
 Identities = 23/36 (63%), Positives = 28/36 (77%)
 Frame = -2

Query: 108 RSSALKLRPTPPPTEIASRKRPRITPRASVVKRKVL 1
           RSSALK++PTPPP E+ S KRPR   R++  KRKVL
Sbjct: 749 RSSALKMKPTPPP-EVVSMKRPRTATRSNASKRKVL 783



 Score = 46.6 bits (109), Expect(2) = 2e-11
 Identities = 26/67 (38%), Positives = 38/67 (56%), Gaps = 2/67 (2%)
 Frame = -1

Query: 361 SVPASVPDAQNDLLAQFTPEK--EVSEEGGNGLKNPSGQKRQLMESALVQWYGSSTKLSG 188
           S+P  + D  ND L + TP+K  E SE  G  +KN SG+KR   ES L     +S +  G
Sbjct: 664 SMPEGLVDPPNDFLVELTPDKVLEGSEGDGAAMKNISGKKRSFTESTLTLHSLNSVETFG 723

Query: 187 IPRSKRT 167
           + +S++T
Sbjct: 724 VSKSRKT 730


>emb|CBI23350.3| unnamed protein product [Vitis vinifera]
          Length = 1133

 Score = 47.0 bits (110), Expect(2) = 2e-11
 Identities = 23/36 (63%), Positives = 28/36 (77%)
 Frame = -2

Query: 108 RSSALKLRPTPPPTEIASRKRPRITPRASVVKRKVL 1
           RSSALK++PTPPP E+ S KRPR   R++  KRKVL
Sbjct: 648 RSSALKMKPTPPP-EVVSMKRPRTATRSNASKRKVL 682



 Score = 46.6 bits (109), Expect(2) = 2e-11
 Identities = 26/67 (38%), Positives = 38/67 (56%), Gaps = 2/67 (2%)
 Frame = -1

Query: 361 SVPASVPDAQNDLLAQFTPEK--EVSEEGGNGLKNPSGQKRQLMESALVQWYGSSTKLSG 188
           S+P  + D  ND L + TP+K  E SE  G  +KN SG+KR   ES L     +S +  G
Sbjct: 563 SMPEGLVDPPNDFLVELTPDKVLEGSEGDGAAMKNISGKKRSFTESTLTLHSLNSVETFG 622

Query: 187 IPRSKRT 167
           + +S++T
Sbjct: 623 VSKSRKT 629


>ref|XP_002315112.1| predicted protein [Populus trichocarpa] gi|222864152|gb|EEF01283.1|
           predicted protein [Populus trichocarpa]
          Length = 1065

 Score = 46.2 bits (108), Expect(2) = 1e-10
 Identities = 22/36 (61%), Positives = 26/36 (72%)
 Frame = -2

Query: 108 RSSALKLRPTPPPTEIASRKRPRITPRASVVKRKVL 1
           RSS LK++PTPP  E+AS KR R   R S +KRKVL
Sbjct: 535 RSSVLKMKPTPPAPEVASMKRARSVSRPSAMKRKVL 570



 Score = 44.7 bits (104), Expect(2) = 1e-10
 Identities = 27/68 (39%), Positives = 39/68 (57%), Gaps = 2/68 (2%)
 Frame = -1

Query: 361 SVPASVPDAQNDLLAQFTPEKEVSEEG--GNGLKNPSGQKRQLMESALVQWYGSSTKLSG 188
           SVP  + D  NDLL + TP+KE+ + G   +   N +G+KR   E++L     +S    G
Sbjct: 450 SVPQELLDKPNDLLVESTPDKEMVDGGDRSSAGTNITGKKRSFTENSLTVQSLNSIDSFG 509

Query: 187 IPRSKRTV 164
           + RSKRTV
Sbjct: 510 VSRSKRTV 517


>gb|AEY85029.1| cohesin subunit [Camellia sinensis]
          Length = 1336

 Score = 45.1 bits (105), Expect(2) = 2e-09
 Identities = 22/36 (61%), Positives = 26/36 (72%)
 Frame = -2

Query: 108 RSSALKLRPTPPPTEIASRKRPRITPRASVVKRKVL 1
           RSS LK++PTPPP  +   KRPRITPR    KRK+L
Sbjct: 750 RSSVLKMKPTPPPA-MTCMKRPRITPRVYASKRKLL 784



 Score = 41.6 bits (96), Expect(2) = 2e-09
 Identities = 24/68 (35%), Positives = 37/68 (54%), Gaps = 3/68 (4%)
 Frame = -1

Query: 361 SVPASVPDAQNDLLAQFTPEKE---VSEEGGNGLKNPSGQKRQLMESALVQWYGSSTKLS 191
           SVP  + D Q++LL + TP+K      +E   G+ N +G+KR   ES +     +S +  
Sbjct: 664 SVPEGLADLQDNLLMESTPDKTHLATGDESDAGINNIAGKKRSFTESTMTLQSLNSVESL 723

Query: 190 GIPRSKRT 167
           G+  SKRT
Sbjct: 724 GMVHSKRT 731