BLASTX nr result

ID: Coptis23_contig00017204 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00017204
         (311 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270682.1| PREDICTED: electron transfer flavoprotein-ub...   192   3e-47
emb|CBI36719.3| unnamed protein product [Vitis vinifera]              192   3e-47
ref|XP_004160647.1| PREDICTED: electron transfer flavoprotein-ub...   184   8e-45
ref|XP_004147657.1| PREDICTED: electron transfer flavoprotein-ub...   184   8e-45
ref|NP_181868.1| electron-transferring-flavoprotein dehydrogenas...   183   1e-44

>ref|XP_002270682.1| PREDICTED: electron transfer flavoprotein-ubiquinone
           oxidoreductase, mitochondrial-like [Vitis vinifera]
          Length = 676

 Score =  192 bits (487), Expect = 3e-47
 Identities = 88/103 (85%), Positives = 96/103 (93%)
 Frame = +2

Query: 2   AIIGCSAGFLNVPKIKGTHTAMKSGMLAAEATYGALHENSSMETYWDNLKKSWIWDELYK 181
           AIIGCSAGFLNVPKIKGTHTAMKSGMLAAEA +  LHE SSME YWD L+ SWIW+EL+K
Sbjct: 453 AIIGCSAGFLNVPKIKGTHTAMKSGMLAAEAAFDVLHEGSSMEKYWDGLRNSWIWEELHK 512

Query: 182 ARNFRPAFDYGLIPGLALSAIEHYVLRGRSPLTLKHGKPDHEA 310
           ARN+RPAF+YGLIPGLALSA+EHYVL+GRSPLTLKHGKPDHEA
Sbjct: 513 ARNYRPAFEYGLIPGLALSALEHYVLKGRSPLTLKHGKPDHEA 555


>emb|CBI36719.3| unnamed protein product [Vitis vinifera]
          Length = 536

 Score =  192 bits (487), Expect = 3e-47
 Identities = 88/103 (85%), Positives = 96/103 (93%)
 Frame = +2

Query: 2   AIIGCSAGFLNVPKIKGTHTAMKSGMLAAEATYGALHENSSMETYWDNLKKSWIWDELYK 181
           AIIGCSAGFLNVPKIKGTHTAMKSGMLAAEA +  LHE SSME YWD L+ SWIW+EL+K
Sbjct: 313 AIIGCSAGFLNVPKIKGTHTAMKSGMLAAEAAFDVLHEGSSMEKYWDGLRNSWIWEELHK 372

Query: 182 ARNFRPAFDYGLIPGLALSAIEHYVLRGRSPLTLKHGKPDHEA 310
           ARN+RPAF+YGLIPGLALSA+EHYVL+GRSPLTLKHGKPDHEA
Sbjct: 373 ARNYRPAFEYGLIPGLALSALEHYVLKGRSPLTLKHGKPDHEA 415


>ref|XP_004160647.1| PREDICTED: electron transfer flavoprotein-ubiquinone
           oxidoreductase, mitochondrial-like [Cucumis sativus]
          Length = 668

 Score =  184 bits (466), Expect = 8e-45
 Identities = 82/103 (79%), Positives = 94/103 (91%)
 Frame = +2

Query: 2   AIIGCSAGFLNVPKIKGTHTAMKSGMLAAEATYGALHENSSMETYWDNLKKSWIWDELYK 181
           AIIGCSAGFLNVPKIKGTHTAMKSGMLAAEA +  LH  S M+ YWD+L+ SWIW+ELY+
Sbjct: 445 AIIGCSAGFLNVPKIKGTHTAMKSGMLAAEAAFATLHRASKMDVYWDSLQSSWIWEELYR 504

Query: 182 ARNFRPAFDYGLIPGLALSAIEHYVLRGRSPLTLKHGKPDHEA 310
           ARN+RPAF++GLIPGL +SA+EHYVL+GRSPLTLKHGKPDHEA
Sbjct: 505 ARNYRPAFEHGLIPGLTISALEHYVLKGRSPLTLKHGKPDHEA 547


>ref|XP_004147657.1| PREDICTED: electron transfer flavoprotein-ubiquinone
           oxidoreductase, mitochondrial-like [Cucumis sativus]
          Length = 659

 Score =  184 bits (466), Expect = 8e-45
 Identities = 82/103 (79%), Positives = 94/103 (91%)
 Frame = +2

Query: 2   AIIGCSAGFLNVPKIKGTHTAMKSGMLAAEATYGALHENSSMETYWDNLKKSWIWDELYK 181
           AIIGCSAGFLNVPKIKGTHTAMKSGMLAAEA +  LH  S M+ YWD+L+ SWIW+ELY+
Sbjct: 436 AIIGCSAGFLNVPKIKGTHTAMKSGMLAAEAAFATLHRASKMDVYWDSLQSSWIWEELYR 495

Query: 182 ARNFRPAFDYGLIPGLALSAIEHYVLRGRSPLTLKHGKPDHEA 310
           ARN+RPAF++GLIPGL +SA+EHYVL+GRSPLTLKHGKPDHEA
Sbjct: 496 ARNYRPAFEHGLIPGLTISALEHYVLKGRSPLTLKHGKPDHEA 538


>ref|NP_181868.1| electron-transferring-flavoprotein dehydrogenase [Arabidopsis
           thaliana] gi|2288999|gb|AAB64328.1| putative electron
           transfer flavoprotein ubiquinone oxidoreductase
           [Arabidopsis thaliana] gi|330255167|gb|AEC10261.1|
           electron-transferring-flavoprotein dehydrogenase
           [Arabidopsis thaliana]
          Length = 633

 Score =  183 bits (464), Expect = 1e-44
 Identities = 82/103 (79%), Positives = 93/103 (90%)
 Frame = +2

Query: 2   AIIGCSAGFLNVPKIKGTHTAMKSGMLAAEATYGALHENSSMETYWDNLKKSWIWDELYK 181
           AIIGCSAGFLNVPKIKGTHTAMKSGMLAAEA +GALHE  +M TYWDNL+ SW+W ELY 
Sbjct: 410 AIIGCSAGFLNVPKIKGTHTAMKSGMLAAEAAFGALHEGLNMNTYWDNLRDSWVWKELYA 469

Query: 182 ARNFRPAFDYGLIPGLALSAIEHYVLRGRSPLTLKHGKPDHEA 310
           ARN+RPAF+YGL+PGLA+SA+EHYVL+G+ P TLKHGK DHEA
Sbjct: 470 ARNYRPAFEYGLLPGLAISAMEHYVLKGKVPFTLKHGKADHEA 512


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