BLASTX nr result

ID: Coptis23_contig00017191 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00017191
         (381 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272463.2| PREDICTED: uncharacterized protein LOC100261...   120   2e-25
ref|XP_004158919.1| PREDICTED: uncharacterized protein LOC101229...   102   2e-20
ref|XP_003521244.1| PREDICTED: uncharacterized protein LOC100795...    92   4e-17
ref|XP_002889442.1| hypothetical protein ARALYDRAFT_470297 [Arab...    86   2e-15
ref|NP_001055029.1| Os05g0251400 [Oryza sativa Japonica Group] g...    86   2e-15

>ref|XP_002272463.2| PREDICTED: uncharacterized protein LOC100261429 [Vitis vinifera]
           gi|296086737|emb|CBI32372.3| unnamed protein product
           [Vitis vinifera]
          Length = 276

 Score =  120 bits (300), Expect = 2e-25
 Identities = 59/91 (64%), Positives = 71/91 (78%), Gaps = 3/91 (3%)
 Frame = +2

Query: 2   KLFLLVKAPATFNLPLHFLPKRDFRYSKKIVPFKLHIKCKVREQDMDT---SECCASSSS 172
           KLFLLV+A ++FNLPLHFLPKRDFRYSKKI+PF+L +KC+ R Q+MDT       A+SSS
Sbjct: 185 KLFLLVRASSSFNLPLHFLPKRDFRYSKKIIPFRLQLKCRTRNQEMDTPHHDSQTANSSS 244

Query: 173 IVLPVATSNDSIWFQCRHAIKGLTLKIPSPE 265
           I L  ++S+D IWFQCRH IKGL  K PS E
Sbjct: 245 INLTDSSSDDLIWFQCRHVIKGLASKAPSME 275


>ref|XP_004158919.1| PREDICTED: uncharacterized protein LOC101229071 [Cucumis sativus]
          Length = 269

 Score =  102 bits (255), Expect = 2e-20
 Identities = 52/91 (57%), Positives = 62/91 (68%), Gaps = 3/91 (3%)
 Frame = +2

Query: 2   KLFLLVKAPATFNLPLHFLPKRDFRYSKKIVPFKLHIKCKVREQDM---DTSECCASSSS 172
           KLFLLVKAP++FNLPLHF+PKR+FRYS+KIVPFKL  KCK + Q M   D        +S
Sbjct: 179 KLFLLVKAPSSFNLPLHFIPKREFRYSRKIVPFKLRFKCKAQIQQMKHPDHDRESQVGNS 238

Query: 173 IVLPVATSNDSIWFQCRHAIKGLTLKIPSPE 265
             L  ++  D IWFQCRHAIKGL    P  +
Sbjct: 239 DDLTNSSVEDPIWFQCRHAIKGLAFNRPDED 269


>ref|XP_003521244.1| PREDICTED: uncharacterized protein LOC100795646 [Glycine max]
          Length = 259

 Score = 92.0 bits (227), Expect = 4e-17
 Identities = 44/88 (50%), Positives = 59/88 (67%)
 Frame = +2

Query: 2   KLFLLVKAPATFNLPLHFLPKRDFRYSKKIVPFKLHIKCKVREQDMDTSECCASSSSIVL 181
           KLF+L+KAP++FN P+HFLPKRDFRY++K+VP  L  KC+ ++Q++              
Sbjct: 187 KLFVLIKAPSSFNQPMHFLPKRDFRYNRKVVPLGLLFKCRNQDQEV-------------- 232

Query: 182 PVATSNDSIWFQCRHAIKGLTLKIPSPE 265
             AT+ D IWFQCRH IKGL +  P PE
Sbjct: 233 -TATTEDLIWFQCRHVIKGLAMN-PMPE 258


>ref|XP_002889442.1| hypothetical protein ARALYDRAFT_470297 [Arabidopsis lyrata subsp.
           lyrata] gi|297335284|gb|EFH65701.1| hypothetical protein
           ARALYDRAFT_470297 [Arabidopsis lyrata subsp. lyrata]
          Length = 263

 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 46/88 (52%), Positives = 52/88 (59%)
 Frame = +2

Query: 2   KLFLLVKAPATFNLPLHFLPKRDFRYSKKIVPFKLHIKCKVREQDMDTSECCASSSSIVL 181
           +LF+LV AP T NLP HFLPKRDFRY++K VP KL  KC  R QD  T+           
Sbjct: 190 RLFILVHAPPTLNLPQHFLPKRDFRYNRKFVPSKLRFKC--RTQDNATNS---------- 237

Query: 182 PVATSNDSIWFQCRHAIKGLTLKIPSPE 265
               +ND IWFQCRH IKGL    P  E
Sbjct: 238 --PPTNDLIWFQCRHVIKGLAFHQPVEE 263


>ref|NP_001055029.1| Os05g0251400 [Oryza sativa Japonica Group]
           gi|51038071|gb|AAT93874.1| unknown protein [Oryza sativa
           Japonica Group] gi|113578580|dbj|BAF16943.1|
           Os05g0251400 [Oryza sativa Japonica Group]
           gi|215737374|dbj|BAG96303.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 286

 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 41/84 (48%), Positives = 56/84 (66%), Gaps = 1/84 (1%)
 Frame = +2

Query: 2   KLFLLVKAPATFNLPLHFLPKRDFRYSKKIVPFKLHIKCKVREQDMDTSECCA-SSSSIV 178
           KLF+LV+ P T NLPL FLPKRDFRYSKK+VP ++ IKC +    +D  +  +   +S  
Sbjct: 198 KLFVLVRCPCTLNLPLDFLPKRDFRYSKKVVPLQMCIKCNIAGIQIDNQQITSIVDASRC 257

Query: 179 LPVATSNDSIWFQCRHAIKGLTLK 250
              +T ++ IWFQC+H I+GL  K
Sbjct: 258 TSESTISEVIWFQCKHTIRGLPCK 281


Top