BLASTX nr result
ID: Coptis23_contig00017187
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis23_contig00017187
(1330 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002521772.1| conserved hypothetical protein [Ricinus comm... 105 2e-20
ref|XP_002282067.1| PREDICTED: F-box protein At3g07870-like [Vit... 96 2e-17
ref|XP_002327285.1| predicted protein [Populus trichocarpa] gi|2... 90 1e-15
ref|NP_001148841.1| F-box protein interaction domain containing ... 69 2e-09
ref|NP_001130875.1| uncharacterized protein LOC100191979 [Zea ma... 69 2e-09
>ref|XP_002521772.1| conserved hypothetical protein [Ricinus communis]
gi|223538985|gb|EEF40582.1| conserved hypothetical
protein [Ricinus communis]
Length = 413
Score = 105 bits (263), Expect = 2e-20
Identities = 108/402 (26%), Positives = 173/402 (43%), Gaps = 42/402 (10%)
Frame = -2
Query: 1218 EKESNLPVPYLGIDTISIIFTKVHARDVQKLRHFCKEWYKLISSSFFTAAHLRQAKPGLI 1039
++++ VPY D IS I ++ + +Q R CK WY +I+SS F AHLR+++ LI
Sbjct: 27 DEQNKQHVPYFHKDCISNILIRLPLQSLQSSRFVCKLWYSIINSSIFIDAHLRRSESVLI 86
Query: 1038 AIP-------------------FSMS---IPIPLGTQYRQP----------DIIQIKDNN 955
+ FS+ + G+ + +P ++ K+ N
Sbjct: 87 YVKPVPNKRYSATSKPPEESNNFSVEASFLQSNSGSIFAEPIMNSAPKFCIQFVEFKEGN 146
Query: 954 EVSICSLELKCEKSVESVCNGLVLLEDLESK--LWVVNPATGQILILPPCIQRSSCLDIK 781
+ I + C ++ + CNGL+LL++ K L V+NP T +++ LP S D
Sbjct: 147 -MKIGEYNVNCLGNIRATCNGLILLDNKLKKGGLIVMNPVTRKLIALPLGTIYSP-QDES 204
Query: 780 REIIFIDSTGEYKVVSVVLNTKTGLLGYEILVLGFSTWKSVSSP----FECISNAKAKAF 613
D+TGEYKVV + + G + E L L WK V+ P F A
Sbjct: 205 YGFALSDTTGEYKVVH-LFRDELGYVSCETLNLRARFWKEVNGPSFGLFRWFGYRPVAAL 263
Query: 612 LDTGNFVSIDGVLH-IALTELLDMEIEFYYVVSFDTVKEKFYKSERPYWCR-NGHLLELD 439
G LH I + D Y+VS + EKF+ P CR + ++E+
Sbjct: 264 ----------GALHWIPQVDHND------YLVSMEVDNEKFHSVPLPKSCRIHDRIIEMG 307
Query: 438 GCPSFVLPNSFSCDWEIWALKDLDSGNWNKQYSVCLTALSNEFPRHWYLSRVRAALENGR 259
G FV + D IW L+ L W KQYS+ ++ + P +L G
Sbjct: 308 GLLCFVTHEELNID--IWNLRSLSGDVWTKQYSITRGSIIDMVP--------ICSLRIGG 357
Query: 258 FLIVQRRFE--YYVYDVLLQQLRCLELDPEAKYSFRSYVESV 139
LI +R + +Y YD L+++R +E+D + +Y+ V
Sbjct: 358 ELIFKRDEDGSFYSYDCRLKEMRKVEMDKKCLPFHGTYLPHV 399
>ref|XP_002282067.1| PREDICTED: F-box protein At3g07870-like [Vitis vinifera]
Length = 417
Score = 95.9 bits (237), Expect = 2e-17
Identities = 117/420 (27%), Positives = 179/420 (42%), Gaps = 45/420 (10%)
Frame = -2
Query: 1245 NLEDKTICSEKESNLPVPYLGIDTISIIFTKVHARDVQKLRHFCKEWYKLISSSFFTAAH 1066
++E++ + S+K VPYL D S I ++ + R CK WYKLI+S F AH
Sbjct: 16 SVEERAL-SKKVEEKQVPYLPKDCFSNILVRLPIESLPSSRLVCKPWYKLINSPIFIDAH 74
Query: 1065 LRQAKPGLIAI-----------PFS-----------MSIPIPL-----GTQYRQPDI--- 976
LR+++ LI + PFS S+ + L + QP I
Sbjct: 75 LRRSEVVLIFLTPIVKQETYLYPFSTRSISQEKPNTFSVEVNLLQLESTPLFHQPVIDPR 134
Query: 975 -------IQIKDNNEVSICSLELKCEKSVESVCNGLVLLEDL--ESKLWVVNPATGQILI 823
++IKD I + C + + NGL+LLE+ +L V+NP T ++
Sbjct: 135 RKSYIQFMEIKDGKS-KIGEFNISCMGEITASFNGLILLENKLKRGRLVVMNPVTRKLTE 193
Query: 822 LPPCIQRSSCLDIKREIIFIDSTGEYKVVSVVLNTKTGLLGYEILVLGFSTWKSVSSP-F 646
LP S ST EYKVV + + + + EIL +G TW+ V+ P F
Sbjct: 194 LP-LGTLSQPHQESYGFALSYSTSEYKVVHL-FHDELRYINCEILNVGTRTWRPVNGPSF 251
Query: 645 ECISNAKAKAFLDTGNFVSIDGVLHIALTELLDMEIEFYYVVSFDTVKEKFYKSERP--Y 472
IS K VS G LH + + D + Y+VS EKF+ + P Y
Sbjct: 252 GLISWFGYKP-------VSAMGALHW-VPHINDND----YIVSLHLENEKFHTVQLPKSY 299
Query: 471 WCRNGHLLELDGCPSFVLPNSFSCDWEIWALKDLDSGNWNKQYSVCLTALSNEFPRHWYL 292
+G ++E+ G FV + IW+LK L W KQ+ + + + P L
Sbjct: 300 RTHDG-IVEMGGSLCFVSHDEEMLQIGIWSLKGLSGEGWTKQHCITTGCILDMVP----L 354
Query: 291 SRVRAALENGRFLIVQRRFE---YYVYDVLLQQLRCLELDPEAKYSFRSYVESVVDPCLK 121
+R E +V +R E Y YD LQ +R ++++ + +V S+V C K
Sbjct: 355 FSMRTTEE-----MVFKRDEDGSLYAYDFQLQVMRKIDMETPLSDCYLPHVNSLVSWCPK 409
>ref|XP_002327285.1| predicted protein [Populus trichocarpa] gi|222835655|gb|EEE74090.1|
predicted protein [Populus trichocarpa]
Length = 426
Score = 89.7 bits (221), Expect = 1e-15
Identities = 104/403 (25%), Positives = 172/403 (42%), Gaps = 49/403 (12%)
Frame = -2
Query: 1200 PVPYLGIDTISIIFTKVHARDVQKLRHFCKEWYKLISSSFFTAAHLRQAKPGLIAI---- 1033
P PY D IS I + + R CK WY +I+S F +H R+++ LI +
Sbjct: 36 PAPYFHKDCISNILIWLPLESLPSSRFVCKPWYNIINSRTFIDSHFRRSESVLIFLKSVS 95
Query: 1032 -----------PFSMS-----------------------IPI--PLGTQYRQPDIIQIKD 961
PFSM+ +PI P T IQ +
Sbjct: 96 RGRSYPYSRPDPFSMTSMPEEQGNTFSVEVALLQSNLKTVPIFGPHVTGSSSKFFIQFME 155
Query: 960 NNE--VSICSLELKCEKSVESVCNGLVLLEDLESK-LWVVNPATGQILILPPCIQRSSCL 790
E + + + C ++ + CNGL+LL++ K L V+NP T +++ LP + C
Sbjct: 156 FKEGKIKVGKYNVSCLGNIRATCNGLILLDNHVKKGLIVMNPVTRKLITLP---LGTLCN 212
Query: 789 DIKREIIFIDS--TGEYKVVSVVLNTKTGLLGYEILVLGFSTWKSVSSPFECISNAKAKA 616
K F + TG+YK+V + + + E L L +W++V+ P + N A
Sbjct: 213 YHKESYGFALNHVTGDYKLVHL-FRDEFEYVTCETLDLATRSWRAVNGPSFGLFNWFGHA 271
Query: 615 FLDTGNFVSIDGVLHIALTELLDMEIEFYYVVSFDTVKEKFYKSERPYWCR-NGHLLELD 439
VS G LH + +L + + ++VS + E+F+ P+ C + ++E+
Sbjct: 272 P------VSAIGALHW-IPQLDNSD----FIVSMEVENERFHCIPLPHRCTTHDRVMEMG 320
Query: 438 GCPSFVLPNSFSCDWEIWALKDLDSGNWNKQYSVCLTALSNEFPRHWYLSRVRAALENGR 259
G FV + D IW LK + G W KQYS+ +L + P L +R + +
Sbjct: 321 GLLCFVTHEDLNID--IWNLKSVPEGIWTKQYSITKGSLIDMVP----LFSLRISGD--- 371
Query: 258 FLIVQRRFE---YYVYDVLLQQLRCLELDPEAKYSFRSYVESV 139
++ RR E ++ YD + +R E+D E S +Y+ V
Sbjct: 372 --VIFRRKEDGSFHAYDFKSEVMREFEMDKERNLSSGAYLPHV 412
>ref|NP_001148841.1| F-box protein interaction domain containing protein [Zea mays]
gi|195622542|gb|ACG33101.1| F-box protein interaction
domain containing protein [Zea mays]
Length = 427
Score = 69.3 bits (168), Expect = 2e-09
Identities = 58/216 (26%), Positives = 96/216 (44%), Gaps = 2/216 (0%)
Frame = -2
Query: 1179 DTISIIFTKVHARDVQKLRHFCKEWYKLISSSFFTAAHLRQAKPGLIAIPFSMSIPIPLG 1000
D +I + RDV KLR CK W + + F HL A +I S+ L
Sbjct: 24 DAQGVILAFLPGRDVVKLRSVCKFWLECVEEHSFMDRHLNNACRYHQSIACFTSLDHGLV 83
Query: 999 TQYRQPDIIQIKDNNEVSICSLELKCEK--SVESVCNGLVLLEDLESKLWVVNPATGQIL 826
Y D ++ S+EL ++ + CNGLV D++ V+NP T + L
Sbjct: 84 HMYTF-------DPATMNFRSVELVFSSRFNMSAPCNGLVCAYDIKGDAEVLNPTTRKHL 136
Query: 825 ILPPCIQRSSCLDIKREIIFIDSTGEYKVVSVVLNTKTGLLGYEILVLGFSTWKSVSSPF 646
LP +S L + + F+ ST +YKVVS+ + + L +EI +G +W+++
Sbjct: 137 RLPDSALKSRSLYSEYFVGFVHSTKQYKVVSIRHHVR--FLTFEICTIGAPSWRTIHESA 194
Query: 645 ECISNAKAKAFLDTGNFVSIDGVLHIALTELLDMEI 538
E + KA D ++ +D + E+L + +
Sbjct: 195 ELLVATKAVIVKDGMYWLLLDEASSYSSREILTLNL 230
>ref|NP_001130875.1| uncharacterized protein LOC100191979 [Zea mays]
gi|194690334|gb|ACF79251.1| unknown [Zea mays]
gi|219887063|gb|ACL53906.1| unknown [Zea mays]
gi|223944517|gb|ACN26342.1| unknown [Zea mays]
gi|223950439|gb|ACN29303.1| unknown [Zea mays]
gi|413926227|gb|AFW66159.1| F-box protein interaction
domain containing protein [Zea mays]
Length = 427
Score = 69.3 bits (168), Expect = 2e-09
Identities = 58/216 (26%), Positives = 96/216 (44%), Gaps = 2/216 (0%)
Frame = -2
Query: 1179 DTISIIFTKVHARDVQKLRHFCKEWYKLISSSFFTAAHLRQAKPGLIAIPFSMSIPIPLG 1000
D +I + RDV KLR CK W + + F HL A +I S+ L
Sbjct: 24 DAQGVILAFLPGRDVVKLRSVCKFWLECVEEHSFMDRHLNNACRYHQSIACFTSLDHGLV 83
Query: 999 TQYRQPDIIQIKDNNEVSICSLELKCEK--SVESVCNGLVLLEDLESKLWVVNPATGQIL 826
Y D ++ S+EL ++ + CNGLV D++ V+NP T + L
Sbjct: 84 HMYTF-------DPATMNFRSVELVFSSRFNMSAPCNGLVCAYDIKGDAEVLNPTTRKHL 136
Query: 825 ILPPCIQRSSCLDIKREIIFIDSTGEYKVVSVVLNTKTGLLGYEILVLGFSTWKSVSSPF 646
LP +S L + + F+ ST +YKVVS+ + + L +EI +G +W+++
Sbjct: 137 RLPDSALKSRSLYSEYFVGFVHSTKQYKVVSIRHHVR--FLTFEICTIGTPSWRTIHESA 194
Query: 645 ECISNAKAKAFLDTGNFVSIDGVLHIALTELLDMEI 538
E + KA D ++ +D + E+L + +
Sbjct: 195 ELLVATKAVIVKDGMYWLLLDEASSYSSREILTLNL 230