BLASTX nr result

ID: Coptis23_contig00017184 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00017184
         (700 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272630.1| PREDICTED: tetratricopeptide repeat protein ...   155   7e-36
ref|NP_001064904.1| Os10g0486900 [Oryza sativa Japonica Group] g...   151   1e-34
gb|AEO33704.1| hypothetical protein [Amblyomma maculatum]             149   4e-34
ref|XP_003622987.1| Tetratricopeptide repeat protein [Medicago t...   149   5e-34
ref|NP_001167951.1| uncharacterized protein LOC100381665 [Zea ma...   149   7e-34

>ref|XP_002272630.1| PREDICTED: tetratricopeptide repeat protein 1 [Vitis vinifera]
           gi|297743714|emb|CBI36597.3| unnamed protein product
           [Vitis vinifera]
          Length = 262

 Score =  155 bits (392), Expect = 7e-36
 Identities = 81/136 (59%), Positives = 95/136 (69%)
 Frame = +1

Query: 292 SFEDALTDEELKQRALAQANDAKAQGNELFGAGQYEDALSKYEFALYVXXXXXXXXXXXX 471
           S EDAL D++LK++ALAQANDAK +GN+LFGAGQY++ALS+YE AL V            
Sbjct: 72  SCEDALNDDQLKEKALAQANDAKMEGNKLFGAGQYQEALSQYELALQVA----------- 120

Query: 472 XXXXXXXXXXXXXXPEAPSCVELRSICHANRAICYSKLGKYDDTIKECTKALEFNSTYIK 651
                         PE PS VE+RSICHAN+AIC+ KL K +D IKECTKALE N TY+K
Sbjct: 121 --------------PEMPSSVEIRSICHANQAICFLKLEKIEDAIKECTKALELNPTYMK 166

Query: 652 ALLRRGEAHEKLEHFE 699
           AL RR EAHEKLEHFE
Sbjct: 167 ALTRRAEAHEKLEHFE 182


>ref|NP_001064904.1| Os10g0486900 [Oryza sativa Japonica Group]
           gi|110289293|gb|AAP54357.2| TPR Domain containing
           protein, expressed [Oryza sativa Japonica Group]
           gi|113639513|dbj|BAF26818.1| Os10g0486900 [Oryza sativa
           Japonica Group] gi|215686667|dbj|BAG88920.1| unnamed
           protein product [Oryza sativa Japonica Group]
          Length = 236

 Score =  151 bits (381), Expect = 1e-34
 Identities = 75/136 (55%), Positives = 96/136 (70%)
 Frame = +1

Query: 292 SFEDALTDEELKQRALAQANDAKAQGNELFGAGQYEDALSKYEFALYVXXXXXXXXXXXX 471
           +FEDALTDE+L+++A +QANDAKA+GN+ FGAG+YE ALS+YE AL +            
Sbjct: 46  AFEDALTDEQLREKARSQANDAKAEGNKFFGAGEYERALSQYETALQIAA---------- 95

Query: 472 XXXXXXXXXXXXXXPEAPSCVELRSICHANRAICYSKLGKYDDTIKECTKALEFNSTYIK 651
                          E  S  ++RS CH+NRA+C+ KLGKYD+TIKECTKALE N +Y+K
Sbjct: 96  ---------------ELESAEDIRSACHSNRAVCFLKLGKYDETIKECTKALELNPSYLK 140

Query: 652 ALLRRGEAHEKLEHFE 699
           ALLRRGEAHEKLEH++
Sbjct: 141 ALLRRGEAHEKLEHYD 156


>gb|AEO33704.1| hypothetical protein [Amblyomma maculatum]
          Length = 222

 Score =  149 bits (377), Expect = 4e-34
 Identities = 76/136 (55%), Positives = 92/136 (67%)
 Frame = +1

Query: 292 SFEDALTDEELKQRALAQANDAKAQGNELFGAGQYEDALSKYEFALYVXXXXXXXXXXXX 471
           SFEDALT ++L +R+L QANDAKA GN LFGAGQY DAL +YE AL +            
Sbjct: 80  SFEDALTQDQLNERSLNQANDAKADGNRLFGAGQYSDALLQYELALQIAS---------- 129

Query: 472 XXXXXXXXXXXXXXPEAPSCVELRSICHANRAICYSKLGKYDDTIKECTKALEFNSTYIK 651
                          E PS  E+RS+CHANRA+C+ KLG+YDD I+E +KALE N +Y+K
Sbjct: 130 ---------------EVPSSEEVRSMCHANRAVCFFKLGRYDDAIRESSKALELNPSYVK 174

Query: 652 ALLRRGEAHEKLEHFE 699
           ALLRRGEAHEKLEH+E
Sbjct: 175 ALLRRGEAHEKLEHYE 190


>ref|XP_003622987.1| Tetratricopeptide repeat protein [Medicago truncatula]
           gi|355498002|gb|AES79205.1| Tetratricopeptide repeat
           protein [Medicago truncatula]
          Length = 271

 Score =  149 bits (376), Expect = 5e-34
 Identities = 78/137 (56%), Positives = 97/137 (70%), Gaps = 1/137 (0%)
 Frame = +1

Query: 292 SFEDAL-TDEELKQRALAQANDAKAQGNELFGAGQYEDALSKYEFALYVXXXXXXXXXXX 468
           S E+AL  +EELKQ+AL++AN+AK +GN+LF  G+YE+ALS+YE AL V           
Sbjct: 76  SSENALINEEELKQKALSEANEAKVEGNKLFVDGKYEEALSQYEHALQVA---------- 125

Query: 469 XXXXXXXXXXXXXXXPEAPSCVELRSICHANRAICYSKLGKYDDTIKECTKALEFNSTYI 648
                          P+ PS VE+RSICHANRA+C+ KLGKY++TIKECTKALE N  Y+
Sbjct: 126 ---------------PDMPSSVEIRSICHANRAVCFMKLGKYENTIKECTKALELNPAYV 170

Query: 649 KALLRRGEAHEKLEHFE 699
           KAL+RRGEAHEKLEHFE
Sbjct: 171 KALVRRGEAHEKLEHFE 187


>ref|NP_001167951.1| uncharacterized protein LOC100381665 [Zea mays]
           gi|223945071|gb|ACN26619.1| unknown [Zea mays]
           gi|414873328|tpg|DAA51885.1| TPA: hypothetical protein
           ZEAMMB73_114223 [Zea mays]
          Length = 248

 Score =  149 bits (375), Expect = 7e-34
 Identities = 73/136 (53%), Positives = 96/136 (70%)
 Frame = +1

Query: 292 SFEDALTDEELKQRALAQANDAKAQGNELFGAGQYEDALSKYEFALYVXXXXXXXXXXXX 471
           +FEDALTDE+L+++A  QANDAKA+GN+LFGAGQYE+ALS+YE +L +            
Sbjct: 58  AFEDALTDEQLREKARIQANDAKAEGNKLFGAGQYEEALSQYEISLQIAA---------- 107

Query: 472 XXXXXXXXXXXXXXPEAPSCVELRSICHANRAICYSKLGKYDDTIKECTKALEFNSTYIK 651
                          E  S  ++R+ CH+NRA+C+ KLGK+D+TIKEC+KALE N TY+K
Sbjct: 108 ---------------ELESAEDIRAACHSNRAVCFLKLGKHDETIKECSKALELNPTYLK 152

Query: 652 ALLRRGEAHEKLEHFE 699
           ALLRR EAHEKLEH++
Sbjct: 153 ALLRRAEAHEKLEHYD 168


Top