BLASTX nr result

ID: Coptis23_contig00017180 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00017180
         (624 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275846.1| PREDICTED: transcription factor GAMYB [Vitis...   228   7e-58
emb|CAN78897.1| hypothetical protein VITISV_025421 [Vitis vinifera]   228   7e-58
ref|XP_002525574.1| r2r3-myb transcription factor, putative [Ric...   212   5e-53
ref|XP_002304822.1| predicted protein [Populus trichocarpa] gi|2...   204   1e-50
ref|XP_002297703.1| predicted protein [Populus trichocarpa] gi|2...   190   2e-46

>ref|XP_002275846.1| PREDICTED: transcription factor GAMYB [Vitis vinifera]
           gi|298205121|emb|CBI40642.3| unnamed protein product
           [Vitis vinifera]
          Length = 559

 Score =  228 bits (581), Expect = 7e-58
 Identities = 119/208 (57%), Positives = 142/208 (68%), Gaps = 1/208 (0%)
 Frame = +2

Query: 2   EIKNYWNTRIKRRQRAGLPLYPPDVCLQQVLNENQQARNTNEFNSGDTPHH-IMQASNYD 178
           EIKNYWNTRIKRRQRAGLPLYPP+VC Q  L E+QQ +NT   N GD  HH ++Q ++Y+
Sbjct: 129 EIKNYWNTRIKRRQRAGLPLYPPEVCFQ-ALQESQQIQNTGGINGGDKVHHDLLQTNSYE 187

Query: 179 IPDVIFDHLKSHQGLLAYAPPLPDLSIGSTLNQSLGSSQNYSFMPMPSTMHRPKRLRGSE 358
           IPDVI D  K++Q    Y P  P+LS  S L +  GSSQ   FM    TMHR KR+R S 
Sbjct: 188 IPDVILDGFKANQDAFPYVPDFPNLSTSSMLMKGFGSSQYCGFMA--PTMHRQKRVRESP 245

Query: 359 ILYPGFNSSVTNGFMPVDEFQIDAAGKINQSFGLSFPYDPDPNGKNPSAFGVLPGSHALL 538
            L+PG+N    NG    D+ Q D   KI QSFGL +P+DPDP  K+P  F  + GSHALL
Sbjct: 246 ALFPGYNER--NGIPLFDQIQDDTGDKIAQSFGLPYPFDPDPTNKDPLPFAGMQGSHALL 303

Query: 539 NGNFSASKAVSGSLKLELPSLQYPEMEL 622
           NGNFSASK +SG +KLELPSLQY E +L
Sbjct: 304 NGNFSASKPISGPVKLELPSLQYLETDL 331


>emb|CAN78897.1| hypothetical protein VITISV_025421 [Vitis vinifera]
          Length = 455

 Score =  228 bits (581), Expect = 7e-58
 Identities = 119/208 (57%), Positives = 142/208 (68%), Gaps = 1/208 (0%)
 Frame = +2

Query: 2   EIKNYWNTRIKRRQRAGLPLYPPDVCLQQVLNENQQARNTNEFNSGDTPHH-IMQASNYD 178
           EIKNYWNTRIKRRQRAGLPLYPP+VC Q  L E+QQ +NT   N GD  HH ++Q ++Y+
Sbjct: 25  EIKNYWNTRIKRRQRAGLPLYPPEVCFQ-ALQESQQIQNTGGINGGDKVHHDLLQTNSYE 83

Query: 179 IPDVIFDHLKSHQGLLAYAPPLPDLSIGSTLNQSLGSSQNYSFMPMPSTMHRPKRLRGSE 358
           IPDVI D  K++Q    Y P  P+LS  S L +  GSSQ   FM    TMHR KR+R S 
Sbjct: 84  IPDVILDGFKANQDAFPYVPDFPNLSTSSMLMKGFGSSQYCGFMA--PTMHRQKRVRESP 141

Query: 359 ILYPGFNSSVTNGFMPVDEFQIDAAGKINQSFGLSFPYDPDPNGKNPSAFGVLPGSHALL 538
            L+PG+N    NG    D+ Q D   KI QSFGL +P+DPDP  K+P  F  + GSHALL
Sbjct: 142 ALFPGYNER--NGIPLFDQIQDDTGDKIAQSFGLPYPFDPDPTNKDPLPFAGMQGSHALL 199

Query: 539 NGNFSASKAVSGSLKLELPSLQYPEMEL 622
           NGNFSASK +SG +KLELPSLQY E +L
Sbjct: 200 NGNFSASKPISGPVKLELPSLQYLETDL 227


>ref|XP_002525574.1| r2r3-myb transcription factor, putative [Ricinus communis]
           gi|223535153|gb|EEF36833.1| r2r3-myb transcription
           factor, putative [Ricinus communis]
          Length = 556

 Score =  212 bits (539), Expect = 5e-53
 Identities = 114/208 (54%), Positives = 141/208 (67%), Gaps = 1/208 (0%)
 Frame = +2

Query: 2   EIKNYWNTRIKRRQRAGLPLYPPDVCLQQVLNENQQARNTNEFNSGDTPH-HIMQASNYD 178
           EIKNYWNTRIKRRQRAGLPLYPP+V  Q  L E+ Q       N+GD  H  +++ + Y+
Sbjct: 129 EIKNYWNTRIKRRQRAGLPLYPPEVSFQ-ALQESHQGLTIGGINTGDKVHGDLLRNNGYE 187

Query: 179 IPDVIFDHLKSHQGLLAYAPPLPDLSIGSTLNQSLGSSQNYSFMPMPSTMHRPKRLRGSE 358
           IPDVIFD LK+ QG+  Y P L D++  S L + L SSQ  SFM  PS  HR KRLR S 
Sbjct: 188 IPDVIFDSLKASQGISPYVPELADITTSSMLIKGLSSSQYGSFMS-PSA-HRQKRLREST 245

Query: 359 ILYPGFNSSVTNGFMPVDEFQIDAAGKINQSFGLSFPYDPDPNGKNPSAFGVLPGSHALL 538
              PG++ ++ + F   D+FQ ++  K+ QSFGLSFP+DPDP  KNP +FG   GSH L 
Sbjct: 246 TFIPGYSGNIKSEFPLFDQFQDESCDKVAQSFGLSFPFDPDPT-KNPQSFGENQGSHTLA 304

Query: 539 NGNFSASKAVSGSLKLELPSLQYPEMEL 622
           NG+FS SK  SG +KLELPSLQYPE +L
Sbjct: 305 NGDFSTSKLTSGPVKLELPSLQYPETDL 332


>ref|XP_002304822.1| predicted protein [Populus trichocarpa] gi|222842254|gb|EEE79801.1|
           predicted protein [Populus trichocarpa]
          Length = 558

 Score =  204 bits (518), Expect = 1e-50
 Identities = 114/208 (54%), Positives = 137/208 (65%), Gaps = 1/208 (0%)
 Frame = +2

Query: 2   EIKNYWNTRIKRRQRAGLPLYPPDVCLQQVLNENQQARNTNEFNSGDTPHH-IMQASNYD 178
           EIKNYWNTRIKRRQRAGLPLYPP+V LQ  L  +QQ  + N  +SG+   H I+Q  NY 
Sbjct: 128 EIKNYWNTRIKRRQRAGLPLYPPEVSLQ-TLQGSQQCLDINGMDSGNKGQHDILQTHNYG 186

Query: 179 IPDVIFDHLKSHQGLLAYAPPLPDLSIGSTLNQSLGSSQNYSFMPMPSTMHRPKRLRGSE 358
           IPDV+FD+LK+++ +L Y P LPD+S  S L + L SSQ  SFM    TMHR KRLR + 
Sbjct: 187 IPDVMFDNLKTNRSILPYVPELPDISASSILMKGLCSSQYGSFMS--PTMHRQKRLREAT 244

Query: 359 ILYPGFNSSVTNGFMPVDEFQIDAAGKINQSFGLSFPYDPDPNGKNPSAFGVLPGSHALL 538
            L   F+  + N F   D+FQ     K  Q FGLSFP+DPD   KNP  FG   GSH L 
Sbjct: 245 TLLSSFSGGMKNDFHLFDQFQ--DGDKAAQYFGLSFPFDPDSATKNPEIFGENQGSHTLA 302

Query: 539 NGNFSASKAVSGSLKLELPSLQYPEMEL 622
           NG+FSASK  S ++K ELPSLQY E +L
Sbjct: 303 NGDFSASKPTSEAVKFELPSLQYAETDL 330


>ref|XP_002297703.1| predicted protein [Populus trichocarpa] gi|222844961|gb|EEE82508.1|
           predicted protein [Populus trichocarpa]
          Length = 402

 Score =  190 bits (483), Expect = 2e-46
 Identities = 106/208 (50%), Positives = 130/208 (62%), Gaps = 1/208 (0%)
 Frame = +2

Query: 2   EIKNYWNTRIKRRQRAGLPLYPPDVCLQQVLNENQQARNTNEFN-SGDTPHHIMQASNYD 178
           EIKNYWNTRIKR QRAGLPLYPP+  LQ  L E+Q+  N +       + H  +Q+++Y 
Sbjct: 128 EIKNYWNTRIKRHQRAGLPLYPPEASLQ-ALQESQRCLNIDRIEIRNKSQHDTLQSNSYG 186

Query: 179 IPDVIFDHLKSHQGLLAYAPPLPDLSIGSTLNQSLGSSQNYSFMPMPSTMHRPKRLRGSE 358
           IP+V+FD+L  HQ +L Y P LPD++  S L + L S Q  SFM     MHR KRLR + 
Sbjct: 187 IPNVMFDNLTPHQSILPYVPELPDITASSMLMKGLSSFQYGSFMS--PIMHRQKRLREAT 244

Query: 359 ILYPGFNSSVTNGFMPVDEFQIDAAGKINQSFGLSFPYDPDPNGKNPSAFGVLPGSHALL 538
            L   F   + N F   D+FQ     K +QSFGL FP+D D   KNP  FG   GSH L 
Sbjct: 245 TLLSSFGGGMKNEFHLFDQFQ--DVDKASQSFGLPFPFDYDSTTKNPEFFGENQGSHTLA 302

Query: 539 NGNFSASKAVSGSLKLELPSLQYPEMEL 622
           NGNFSASK  S ++KLELPSLQY E +L
Sbjct: 303 NGNFSASKPTSEAVKLELPSLQYSETDL 330


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