BLASTX nr result

ID: Coptis23_contig00017171 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00017171
         (1599 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004152502.1| PREDICTED: probable pectate lyase 22-like [C...   677   0.0  
ref|XP_004157771.1| PREDICTED: LOW QUALITY PROTEIN: probable pec...   676   0.0  
gb|AAQ84042.1| pectate lyase [Malus x domestica]                      670   0.0  
dbj|BAE48664.1| Pectate lyase [Prunus mume]                           667   0.0  
ref|XP_003549832.1| PREDICTED: probable pectate lyase 22 isoform...   667   0.0  

>ref|XP_004152502.1| PREDICTED: probable pectate lyase 22-like [Cucumis sativus]
          Length = 413

 Score =  677 bits (1748), Expect = 0.0
 Identities = 319/381 (83%), Positives = 341/381 (89%), Gaps = 1/381 (0%)
 Frame = +2

Query: 119  VQNPDLVAQEVVSKINNST-RRNLGYLSCGTGNPIDDCWRCDPNWEKNRQRLADCAIGFG 295
            V NP+LV QEV   I N+T RRNLGYLSCGTGNPIDDCWRCD NWEKNRQRLADC IGFG
Sbjct: 33   VSNPELVVQEVHRSIINATKRRNLGYLSCGTGNPIDDCWRCDSNWEKNRQRLADCGIGFG 92

Query: 296  KQAVGGRDGRIYVVTDSGNDDPVTPKPGTLRHAVIQDEPLWIIFERDMVIKLKEELIMNS 475
            K A+GGRDG+IYVVTDSG+DDPV PKPGTLR+AVIQDEPLWIIF RDMVI+LKEELIMNS
Sbjct: 93   KNAIGGRDGKIYVVTDSGDDDPVNPKPGTLRYAVIQDEPLWIIFARDMVIRLKEELIMNS 152

Query: 476  FKTIDGRGASVHIAGGPCITIQFVTNIIIHGLHIHDCTQGGNTNVRDSPRHFGFRTLSDG 655
            FKTIDGRGASVHIAGGPCITIQ+VTNIIIHGL+IHDC QGGNT+VRDSPRHFGFRT+SDG
Sbjct: 153  FKTIDGRGASVHIAGGPCITIQYVTNIIIHGLNIHDCKQGGNTDVRDSPRHFGFRTISDG 212

Query: 656  DGVSIFGGSHVWVDHCSLSNCRDGLIDAIHGSTAITISNNYLTHHNKVMLLGHSDTYTQD 835
            DGVSIFGGSHVWVDHCSLSNC DGLIDAIHGSTAITISNNY+THH+KVMLLGHSD+YTQD
Sbjct: 213  DGVSIFGGSHVWVDHCSLSNCNDGLIDAIHGSTAITISNNYMTHHDKVMLLGHSDSYTQD 272

Query: 836  KNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHWEMYAIGGSAAPTINSQGNRFLA 1015
            KNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHWEMYAIGGSAAPTINSQGNRF+A
Sbjct: 273  KNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHWEMYAIGGSAAPTINSQGNRFVA 332

Query: 1016 PNNMDSKEITKHEDAPVYEWKNWNWRSEGDLYLNGAFFTRXXXXXXXXXXXXXXXXXRPS 1195
            PN+  SKE+TK+EDAP  EWKNW+WRSEGDL LNGA+FT                  RPS
Sbjct: 333  PNDRFSKEVTKYEDAPESEWKNWHWRSEGDLMLNGAYFTASGAGASSSYARASSLGARPS 392

Query: 1196 ALVAPLTTAAGALNCRKGSRC 1258
            +LV  +TT AGALNCRKGSRC
Sbjct: 393  SLVGTITTNAGALNCRKGSRC 413


>ref|XP_004157771.1| PREDICTED: LOW QUALITY PROTEIN: probable pectate lyase 22-like
            [Cucumis sativus]
          Length = 413

 Score =  676 bits (1745), Expect = 0.0
 Identities = 319/381 (83%), Positives = 340/381 (89%), Gaps = 1/381 (0%)
 Frame = +2

Query: 119  VQNPDLVAQEVVSKINNST-RRNLGYLSCGTGNPIDDCWRCDPNWEKNRQRLADCAIGFG 295
            V NP+LV QEV   I N+T RRNLGYLSCGTGNPIDDCWRCD NWEKNRQRLADC IGFG
Sbjct: 33   VSNPELVVQEVHRSIINATKRRNLGYLSCGTGNPIDDCWRCDSNWEKNRQRLADCGIGFG 92

Query: 296  KQAVGGRDGRIYVVTDSGNDDPVTPKPGTLRHAVIQDEPLWIIFERDMVIKLKEELIMNS 475
            K A+GGRDG IYVVTDSG+DDPV PKPGTLR+AVIQDEPLWIIF RDMVI+LKEELIMNS
Sbjct: 93   KNAIGGRDGXIYVVTDSGDDDPVNPKPGTLRYAVIQDEPLWIIFARDMVIRLKEELIMNS 152

Query: 476  FKTIDGRGASVHIAGGPCITIQFVTNIIIHGLHIHDCTQGGNTNVRDSPRHFGFRTLSDG 655
            FKTIDGRGASVHIAGGPCITIQ+VTNIIIHGL+IHDC QGGNT+VRDSPRHFGFRT+SDG
Sbjct: 153  FKTIDGRGASVHIAGGPCITIQYVTNIIIHGLNIHDCKQGGNTDVRDSPRHFGFRTISDG 212

Query: 656  DGVSIFGGSHVWVDHCSLSNCRDGLIDAIHGSTAITISNNYLTHHNKVMLLGHSDTYTQD 835
            DGVSIFGGSHVWVDHCSLSNC DGLIDAIHGSTAITISNNY+THH+KVMLLGHSD+YTQD
Sbjct: 213  DGVSIFGGSHVWVDHCSLSNCNDGLIDAIHGSTAITISNNYMTHHDKVMLLGHSDSYTQD 272

Query: 836  KNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHWEMYAIGGSAAPTINSQGNRFLA 1015
            KNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHWEMYAIGGSAAPTINSQGNRF+A
Sbjct: 273  KNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHWEMYAIGGSAAPTINSQGNRFVA 332

Query: 1016 PNNMDSKEITKHEDAPVYEWKNWNWRSEGDLYLNGAFFTRXXXXXXXXXXXXXXXXXRPS 1195
            PN+  SKE+TK+EDAP  EWKNW+WRSEGDL LNGA+FT                  RPS
Sbjct: 333  PNDRFSKEVTKYEDAPESEWKNWHWRSEGDLMLNGAYFTASGAGASSSYARASSLGARPS 392

Query: 1196 ALVAPLTTAAGALNCRKGSRC 1258
            +LV  +TT AGALNCRKGSRC
Sbjct: 393  SLVGTITTNAGALNCRKGSRC 413


>gb|AAQ84042.1| pectate lyase [Malus x domestica]
          Length = 418

 Score =  670 bits (1728), Expect = 0.0
 Identities = 312/381 (81%), Positives = 339/381 (88%), Gaps = 1/381 (0%)
 Frame = +2

Query: 119  VQNPDLVAQEVVSKINNS-TRRNLGYLSCGTGNPIDDCWRCDPNWEKNRQRLADCAIGFG 295
            +Q+P+LV QEV   I++S +RRNLGYLSCGTGNPIDDCWRCDPNWEKNRQ LADCAIGFG
Sbjct: 38   LQDPELVVQEVQRNISDSVSRRNLGYLSCGTGNPIDDCWRCDPNWEKNRQSLADCAIGFG 97

Query: 296  KQAVGGRDGRIYVVTDSGNDDPVTPKPGTLRHAVIQDEPLWIIFERDMVIKLKEELIMNS 475
            K A+GGRDG+IYVVTDSG+DDPV PKPGTLRHAVIQDEPLWIIF+RDM I+LKEELIMNS
Sbjct: 98   KNAIGGRDGKIYVVTDSGDDDPVNPKPGTLRHAVIQDEPLWIIFQRDMTIQLKEELIMNS 157

Query: 476  FKTIDGRGASVHIAGGPCITIQFVTNIIIHGLHIHDCTQGGNTNVRDSPRHFGFRTLSDG 655
            FKTIDGRGASVHIAGGPCITIQFVTNIIIHGLHIHDC QGGN  VR SPRHFG+RT+SDG
Sbjct: 158  FKTIDGRGASVHIAGGPCITIQFVTNIIIHGLHIHDCKQGGNAMVRSSPRHFGWRTVSDG 217

Query: 656  DGVSIFGGSHVWVDHCSLSNCRDGLIDAIHGSTAITISNNYLTHHNKVMLLGHSDTYTQD 835
            DGVSIFGGSHVWVDHCSLSNC+DGL+DAI+GSTAITISNNY+THH+KVMLLGHSD+YT D
Sbjct: 218  DGVSIFGGSHVWVDHCSLSNCKDGLVDAIYGSTAITISNNYMTHHDKVMLLGHSDSYTND 277

Query: 836  KNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHWEMYAIGGSAAPTINSQGNRFLA 1015
            KNMQ+TIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHWEMYAIGGSA PTINSQGNRF A
Sbjct: 278  KNMQITIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHWEMYAIGGSADPTINSQGNRFAA 337

Query: 1016 PNNMDSKEITKHEDAPVYEWKNWNWRSEGDLYLNGAFFTRXXXXXXXXXXXXXXXXXRPS 1195
            P+   SKE+TKHEDAP  EWKNWNWRSEGDL LNGAFFT                  +PS
Sbjct: 338  PDIRSSKEVTKHEDAPESEWKNWNWRSEGDLMLNGAFFTASGAGASSSYARASSLGAKPS 397

Query: 1196 ALVAPLTTAAGALNCRKGSRC 1258
            +LV  +TTA+GAL+CRKGSRC
Sbjct: 398  SLVGAITTASGALSCRKGSRC 418


>dbj|BAE48664.1| Pectate lyase [Prunus mume]
          Length = 413

 Score =  667 bits (1722), Expect = 0.0
 Identities = 310/380 (81%), Positives = 338/380 (88%), Gaps = 1/380 (0%)
 Frame = +2

Query: 122  QNPDLVAQEVVSKINNS-TRRNLGYLSCGTGNPIDDCWRCDPNWEKNRQRLADCAIGFGK 298
            QNP+LV Q+V   IN+S +RRNLGYLSCGTGNPIDDCWRCDPNWE+NR+RLADCAIGFGK
Sbjct: 34   QNPELVVQDVQRSINDSVSRRNLGYLSCGTGNPIDDCWRCDPNWEQNRERLADCAIGFGK 93

Query: 299  QAVGGRDGRIYVVTDSGNDDPVTPKPGTLRHAVIQDEPLWIIFERDMVIKLKEELIMNSF 478
             AVGGRDG+IYVVTDSG+ DPV PKPGTLRHAVIQDEPLWIIF+RDM I+LKEELIMNSF
Sbjct: 94   NAVGGRDGKIYVVTDSGDSDPVNPKPGTLRHAVIQDEPLWIIFQRDMTIQLKEELIMNSF 153

Query: 479  KTIDGRGASVHIAGGPCITIQFVTNIIIHGLHIHDCTQGGNTNVRDSPRHFGFRTLSDGD 658
            KTIDGRGASVHIAGGPCITIQFVTNIIIHGLHIHDC QGGN  VR SP H+G+RT+SDGD
Sbjct: 154  KTIDGRGASVHIAGGPCITIQFVTNIIIHGLHIHDCKQGGNAMVRSSPEHYGWRTISDGD 213

Query: 659  GVSIFGGSHVWVDHCSLSNCRDGLIDAIHGSTAITISNNYLTHHNKVMLLGHSDTYTQDK 838
            GVSIFGGSHVWVDHCSLSNC+DGL+DAIHGSTAITISNNY+THH+KVMLLGHSD+YT+DK
Sbjct: 214  GVSIFGGSHVWVDHCSLSNCKDGLVDAIHGSTAITISNNYMTHHDKVMLLGHSDSYTEDK 273

Query: 839  NMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHWEMYAIGGSAAPTINSQGNRFLAP 1018
            NMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHWEMYAIGGSA PTINSQGNRF AP
Sbjct: 274  NMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHWEMYAIGGSANPTINSQGNRFAAP 333

Query: 1019 NNMDSKEITKHEDAPVYEWKNWNWRSEGDLYLNGAFFTRXXXXXXXXXXXXXXXXXRPSA 1198
            +   SKE+TKHEDAP  EW+NWNWRSEGDL +NGAFFT                  +PS+
Sbjct: 334  DIRFSKEVTKHEDAPESEWRNWNWRSEGDLMINGAFFTASGAGASSSYARASSLGAKPSS 393

Query: 1199 LVAPLTTAAGALNCRKGSRC 1258
            LV  +TTA+GAL+CRKGSRC
Sbjct: 394  LVGSITTASGALSCRKGSRC 413


>ref|XP_003549832.1| PREDICTED: probable pectate lyase 22 isoform 1 [Glycine max]
          Length = 406

 Score =  667 bits (1721), Expect = 0.0
 Identities = 312/381 (81%), Positives = 339/381 (88%), Gaps = 1/381 (0%)
 Frame = +2

Query: 119  VQNPDLVAQEVVSKINNST-RRNLGYLSCGTGNPIDDCWRCDPNWEKNRQRLADCAIGFG 295
            VQ+P+ VAQEV  KIN S  RRNLGYLSC TGNPIDDCWRCDPNWEKNRQRLADCAIGFG
Sbjct: 26   VQDPEFVAQEVHRKINASVARRNLGYLSCATGNPIDDCWRCDPNWEKNRQRLADCAIGFG 85

Query: 296  KQAVGGRDGRIYVVTDSGNDDPVTPKPGTLRHAVIQDEPLWIIFERDMVIKLKEELIMNS 475
            K A+GG++G+IYVVTDSG+DDPVTPKPGTLR+AVIQDEPLWIIF RDMVIKLKEELIMNS
Sbjct: 86   KNAIGGKNGKIYVVTDSGDDDPVTPKPGTLRYAVIQDEPLWIIFARDMVIKLKEELIMNS 145

Query: 476  FKTIDGRGASVHIAGGPCITIQFVTNIIIHGLHIHDCTQGGNTNVRDSPRHFGFRTLSDG 655
            FKTIDGRGASVHIAGGPCITIQ+VTN+IIHG++IHDC QGGN  VRDSPRH+G+RT+SDG
Sbjct: 146  FKTIDGRGASVHIAGGPCITIQYVTNVIIHGINIHDCKQGGNAMVRDSPRHYGWRTISDG 205

Query: 656  DGVSIFGGSHVWVDHCSLSNCRDGLIDAIHGSTAITISNNYLTHHNKVMLLGHSDTYTQD 835
            DGVSIFGGSHVWVDHCSLSNC DGLIDAIHGST ITISNNY+THH+KVMLLGHSD+YTQD
Sbjct: 206  DGVSIFGGSHVWVDHCSLSNCNDGLIDAIHGSTGITISNNYMTHHDKVMLLGHSDSYTQD 265

Query: 836  KNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHWEMYAIGGSAAPTINSQGNRFLA 1015
            K+MQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHWEMYAIGGSA PTINSQGNRF+A
Sbjct: 266  KSMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHWEMYAIGGSANPTINSQGNRFVA 325

Query: 1016 PNNMDSKEITKHEDAPVYEWKNWNWRSEGDLYLNGAFFTRXXXXXXXXXXXXXXXXXRPS 1195
            P++  SKE+TKHEDAP  EWK WNWRSEGDL +NGAFFT                  RPS
Sbjct: 326  PDDRFSKEVTKHEDAPESEWKGWNWRSEGDLLVNGAFFTASGAGASSSYARASSLSARPS 385

Query: 1196 ALVAPLTTAAGALNCRKGSRC 1258
            +LV  +TT AGAL+CRKGSRC
Sbjct: 386  SLVGSITTGAGALSCRKGSRC 406


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