BLASTX nr result

ID: Coptis23_contig00017166 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00017166
         (324 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002312671.1| predicted protein [Populus trichocarpa] gi|2...    95   5e-18
ref|XP_002315665.1| predicted protein [Populus trichocarpa] gi|2...    93   3e-17
ref|XP_003531334.1| PREDICTED: beta-1,4-mannosyl-glycoprotein 4-...    92   4e-17
gb|ACU17790.1| unknown [Glycine max]                                   92   4e-17
ref|XP_002272340.2| PREDICTED: beta-1,4-mannosyl-glycoprotein 4-...    90   2e-16

>ref|XP_002312671.1| predicted protein [Populus trichocarpa] gi|222852491|gb|EEE90038.1|
           predicted protein [Populus trichocarpa]
          Length = 388

 Score = 95.1 bits (235), Expect = 5e-18
 Identities = 40/66 (60%), Positives = 51/66 (77%)
 Frame = +2

Query: 125 MTEGGGGYSWKKTDDICDGVCSQDTRAALGMLRLRCFLRGLDVKAYILLFVLIPTSVFGI 304
           M E GG Y  KK+DDICD +C QD+   L M R+RC LRG+D+K Y+LLF+L+PT V+GI
Sbjct: 1   MNENGGHYCSKKSDDICDDICGQDSGRILSMSRIRCILRGMDLKTYLLLFILVPTCVYGI 60

Query: 305 YLHGQK 322
           Y+HGQK
Sbjct: 61  YMHGQK 66


>ref|XP_002315665.1| predicted protein [Populus trichocarpa] gi|222864705|gb|EEF01836.1|
           predicted protein [Populus trichocarpa]
          Length = 390

 Score = 92.8 bits (229), Expect = 3e-17
 Identities = 40/67 (59%), Positives = 49/67 (73%)
 Frame = +2

Query: 122 MMTEGGGGYSWKKTDDICDGVCSQDTRAALGMLRLRCFLRGLDVKAYILLFVLIPTSVFG 301
           MM E GG Y  KKTDDIC   C QD+   L M R+RC LRG+D+K Y+LLF+L+P  V+G
Sbjct: 4   MMNENGGHYCSKKTDDICSDFCGQDSSRVLSMSRIRCILRGMDLKMYLLLFILVPPCVYG 63

Query: 302 IYLHGQK 322
           IY+HGQK
Sbjct: 64  IYMHGQK 70


>ref|XP_003531334.1| PREDICTED: beta-1,4-mannosyl-glycoprotein
           4-beta-N-acetylglucosaminyltransferase-like [Glycine
           max]
          Length = 391

 Score = 92.0 bits (227), Expect = 4e-17
 Identities = 40/67 (59%), Positives = 48/67 (71%)
 Frame = +2

Query: 122 MMTEGGGGYSWKKTDDICDGVCSQDTRAALGMLRLRCFLRGLDVKAYILLFVLIPTSVFG 301
           MM E GG Y  KK+DD+C  VC Q++   LGM R+RC LRGLDVK YI +F +IP  VFG
Sbjct: 4   MMNETGGNYCSKKSDDLCSNVCDQESSQVLGMSRIRCILRGLDVKTYIFMFAVIPMCVFG 63

Query: 302 IYLHGQK 322
            Y+HGQK
Sbjct: 64  FYIHGQK 70


>gb|ACU17790.1| unknown [Glycine max]
          Length = 391

 Score = 92.0 bits (227), Expect = 4e-17
 Identities = 40/67 (59%), Positives = 48/67 (71%)
 Frame = +2

Query: 122 MMTEGGGGYSWKKTDDICDGVCSQDTRAALGMLRLRCFLRGLDVKAYILLFVLIPTSVFG 301
           MM E GG Y  KK+DD+C  VC Q++   LGM R+RC LRGLDVK YI +F +IP  VFG
Sbjct: 4   MMNETGGNYCSKKSDDLCSNVCDQESSQVLGMSRIRCILRGLDVKTYIFMFAVIPMCVFG 63

Query: 302 IYLHGQK 322
            Y+HGQK
Sbjct: 64  FYIHGQK 70


>ref|XP_002272340.2| PREDICTED: beta-1,4-mannosyl-glycoprotein
           4-beta-N-acetylglucosaminyltransferase [Vitis vinifera]
          Length = 386

 Score = 90.1 bits (222), Expect = 2e-16
 Identities = 41/61 (67%), Positives = 47/61 (77%)
 Frame = +2

Query: 140 GGYSWKKTDDICDGVCSQDTRAALGMLRLRCFLRGLDVKAYILLFVLIPTSVFGIYLHGQ 319
           G YS KKTDDIC+ VC Q +  AL M RLRC LRGLD+K YILL V++PT  FG+YLHGQ
Sbjct: 4   GYYSSKKTDDICEDVCGQASHGALSMTRLRCILRGLDLKTYILLIVIVPTFFFGVYLHGQ 63

Query: 320 K 322
           K
Sbjct: 64  K 64


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