BLASTX nr result

ID: Coptis23_contig00017156 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00017156
         (376 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263464.1| PREDICTED: uncharacterized protein LOC100265...   125   3e-27
emb|CAN66425.1| hypothetical protein VITISV_007985 [Vitis vinifera]   125   4e-27
ref|XP_002322176.1| predicted protein [Populus trichocarpa] gi|2...   124   1e-26
ref|XP_002318084.1| predicted protein [Populus trichocarpa] gi|2...   124   1e-26
gb|ABK96116.1| unknown [Populus trichocarpa]                          124   1e-26

>ref|XP_002263464.1| PREDICTED: uncharacterized protein LOC100265372 [Vitis vinifera]
           gi|297733749|emb|CBI14996.3| unnamed protein product
           [Vitis vinifera]
          Length = 343

 Score =  125 bits (315), Expect = 3e-27
 Identities = 65/117 (55%), Positives = 83/117 (70%), Gaps = 1/117 (0%)
 Frame = -1

Query: 352 KVKHFKVSAFKGSAKNEESGGRSNASKLPKNSVKLSYVPQ-NEETIAESPNTEQAPISYS 176
           K +  K+ AFKGSA+N+ESGGR++ SK PKNSV+LSY PQ NEETI ESP ++  P+ YS
Sbjct: 64  KRRPLKICAFKGSAQNDESGGRASGSKSPKNSVRLSYAPQGNEETITESPKSQNVPLPYS 123

Query: 175 SEREENIAGSPAIQKLFQKWLMMLRTQSTNQASDAIFEDEPVQSGILESQSESKKQE 5
           SE    I GS AIQ LF+KWL MLRTQS +Q  D I  + P    ILE+Q+E + ++
Sbjct: 124 SEANGTIGGSLAIQNLFKKWLTMLRTQSPSQEVDEILGEGPAVKEILETQNEIQNKD 180


>emb|CAN66425.1| hypothetical protein VITISV_007985 [Vitis vinifera]
          Length = 307

 Score =  125 bits (314), Expect = 4e-27
 Identities = 65/117 (55%), Positives = 83/117 (70%), Gaps = 1/117 (0%)
 Frame = -1

Query: 352 KVKHFKVSAFKGSAKNEESGGRSNASKLPKNSVKLSYVPQ-NEETIAESPNTEQAPISYS 176
           K +  K+ AFKGSA+N+ESGGR++ SK PKNSV+LSY PQ NEETI ESP ++  P+ YS
Sbjct: 28  KRRPLKICAFKGSAQNDESGGRASGSKSPKNSVRLSYAPQGNEETITESPKSQNVPLPYS 87

Query: 175 SEREENIAGSPAIQKLFQKWLMMLRTQSTNQASDAIFEDEPVQSGILESQSESKKQE 5
           SE    I GS AIQ LF+KWL MLRTQS +Q  D I  + P    ILE+Q+E + ++
Sbjct: 88  SEANGTIGGSLAIQNLFKKWLTMLRTQSPSQEVDEILGEGPAVKEILETQNEIQXKD 144


>ref|XP_002322176.1| predicted protein [Populus trichocarpa] gi|222869172|gb|EEF06303.1|
           predicted protein [Populus trichocarpa]
          Length = 343

 Score =  124 bits (310), Expect = 1e-26
 Identities = 64/118 (54%), Positives = 87/118 (73%), Gaps = 2/118 (1%)
 Frame = -1

Query: 352 KVKHFKVSAFKGSAKNEESGGRSNASKLPKNSVKLSYVPQNE-ETIAESPNTEQAPISYS 176
           KVK  +VSAFKGSA+N+ESGGR+N SK+ K SVKLSYVP+   ET+ +S      P+SY+
Sbjct: 63  KVKLLRVSAFKGSAQNDESGGRANGSKVSKKSVKLSYVPKESGETMMDSSKVHSIPVSYT 122

Query: 175 SEREENIAGSPAIQKLFQKWLMMLRTQSTNQASDAIFED-EPVQSGILESQSESKKQE 5
           SE +E IAGSPAI KLF+KWL MLRTQS +Q +D I E+  P +  + ++Q+ ++ +E
Sbjct: 123 SEADERIAGSPAINKLFKKWLSMLRTQSPSQVADEILEEGPPPREELQQAQNTTQNKE 180


>ref|XP_002318084.1| predicted protein [Populus trichocarpa] gi|222858757|gb|EEE96304.1|
           predicted protein [Populus trichocarpa]
          Length = 298

 Score =  124 bits (310), Expect = 1e-26
 Identities = 63/117 (53%), Positives = 81/117 (69%), Gaps = 1/117 (0%)
 Frame = -1

Query: 352 KVKHFKVSAFKGSAKNEESGGRSNASKLPKNSVKLSYVPQNE-ETIAESPNTEQAPISYS 176
           KVK  ++SAFKGSA+N+ESGGR N SK+ KN VKLSYVP+   ETI  S      P+SY+
Sbjct: 19  KVKLLRISAFKGSAQNDESGGRKNGSKVSKNYVKLSYVPKESGETIINSSKVHTIPVSYT 78

Query: 175 SEREENIAGSPAIQKLFQKWLMMLRTQSTNQASDAIFEDEPVQSGILESQSESKKQE 5
           SE    IAGSPAI KLF+KWL MLRTQS +Q +D I E  P    + ++Q+ ++ +E
Sbjct: 79  SEANNRIAGSPAINKLFKKWLSMLRTQSPSQVADEILEGPPPSEELQQAQNSTQNKE 135


>gb|ABK96116.1| unknown [Populus trichocarpa]
          Length = 342

 Score =  124 bits (310), Expect = 1e-26
 Identities = 63/117 (53%), Positives = 81/117 (69%), Gaps = 1/117 (0%)
 Frame = -1

Query: 352 KVKHFKVSAFKGSAKNEESGGRSNASKLPKNSVKLSYVPQNE-ETIAESPNTEQAPISYS 176
           KVK  ++SAFKGSA+N+ESGGR N SK+ KN VKLSYVP+   ETI  S      P+SY+
Sbjct: 63  KVKLLRISAFKGSAQNDESGGRKNGSKVSKNYVKLSYVPKESGETIINSSKVHTIPVSYT 122

Query: 175 SEREENIAGSPAIQKLFQKWLMMLRTQSTNQASDAIFEDEPVQSGILESQSESKKQE 5
           SE    IAGSPAI KLF+KWL MLRTQS +Q +D I E  P    + ++Q+ ++ +E
Sbjct: 123 SEANNRIAGSPAINKLFKKWLSMLRTQSPSQVADEILEGPPPSEELQQAQNSTQNKE 179


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