BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00017154
         (381 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI15551.3| unnamed protein product [Vitis vinifera]              204   8e-51
ref|XP_003634283.1| PREDICTED: pentatricopeptide repeat-containi...   204   8e-51
ref|XP_004160443.1| PREDICTED: pentatricopeptide repeat-containi...   195   3e-48
ref|XP_004137551.1| PREDICTED: pentatricopeptide repeat-containi...   194   8e-48
ref|XP_003524347.1| PREDICTED: pentatricopeptide repeat-containi...   193   1e-47

>emb|CBI15551.3| unnamed protein product [Vitis vinifera]
          Length = 685

 Score =  204 bits (518), Expect = 8e-51
 Identities = 93/126 (73%), Positives = 113/126 (89%)
 Frame = +2

Query: 2   DLVAWNTMITCYAKHGFGKEALKVFDSMKMKDIKPDDVTMVGVLSACSHSGLIDKGTGYF 181
           ++V+WNTMI  YA+HGFGKEAL +F+SMK   I PDDVTMVGVLSACSH+GL+DKGT YF
Sbjct: 378 EVVSWNTMIAGYARHGFGKEALMLFESMKKTGILPDDVTMVGVLSACSHTGLVDKGTEYF 437

Query: 182 HSMCLEYGITANARHYTCMIDLLGRSGRLEEAEALMRNMPFEPDAATWGALLGASRVHRN 361
           +SM  +YGITAN++HYTCMIDLLGR+GRL++A+ LM+NMPFEPDAATWGALLGASR+H N
Sbjct: 438 YSMTQDYGITANSKHYTCMIDLLGRAGRLDDAQNLMKNMPFEPDAATWGALLGASRIHGN 497

Query: 362 TKLAEE 379
           T+L E+
Sbjct: 498 TELGEK 503


>ref|XP_003634283.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g02750-like [Vitis vinifera]
          Length = 766

 Score =  204 bits (518), Expect = 8e-51
 Identities = 93/126 (73%), Positives = 113/126 (89%)
 Frame = +2

Query: 2   DLVAWNTMITCYAKHGFGKEALKVFDSMKMKDIKPDDVTMVGVLSACSHSGLIDKGTGYF 181
           ++V+WNTMI  YA+HGFGKEAL +F+SMK   I PDDVTMVGVLSACSH+GL+DKGT YF
Sbjct: 459 EVVSWNTMIAGYARHGFGKEALMLFESMKKTGILPDDVTMVGVLSACSHTGLVDKGTEYF 518

Query: 182 HSMCLEYGITANARHYTCMIDLLGRSGRLEEAEALMRNMPFEPDAATWGALLGASRVHRN 361
           +SM  +YGITAN++HYTCMIDLLGR+GRL++A+ LM+NMPFEPDAATWGALLGASR+H N
Sbjct: 519 YSMTQDYGITANSKHYTCMIDLLGRAGRLDDAQNLMKNMPFEPDAATWGALLGASRIHGN 578

Query: 362 TKLAEE 379
           T+L E+
Sbjct: 579 TELGEK 584


>ref|XP_004160443.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g02750-like [Cucumis sativus]
          Length = 776

 Score =  195 bits (496), Expect = 3e-48
 Identities = 93/126 (73%), Positives = 111/126 (88%)
 Frame = +2

Query: 2   DLVAWNTMITCYAKHGFGKEALKVFDSMKMKDIKPDDVTMVGVLSACSHSGLIDKGTGYF 181
           D+V+WNTMI  YA+HGFGKEAL +F+SMKM  IKPDDVT+VGVLSACSH+GL+DKG  YF
Sbjct: 470 DIVSWNTMIAGYARHGFGKEALALFESMKMT-IKPDDVTLVGVLSACSHTGLVDKGMEYF 528

Query: 182 HSMCLEYGITANARHYTCMIDLLGRSGRLEEAEALMRNMPFEPDAATWGALLGASRVHRN 361
           +SM   YGITANA+HYTCMIDLLGR+GRL+EA  LM++MPF PDAATWGALLGASR+H +
Sbjct: 529 NSMYQNYGITANAKHYTCMIDLLGRAGRLDEALNLMKSMPFYPDAATWGALLGASRIHGD 588

Query: 362 TKLAEE 379
           T+L E+
Sbjct: 589 TELGEK 594



 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 34/112 (30%), Positives = 64/112 (57%)
 Frame = +2

Query: 2   DLVAWNTMITCYAKHGFGKEALKVFDSMKMKDIKPDDVTMVGVLSACSHSGLIDKGTGYF 181
           D+V+WN M++ +A++GF +EA K+FD M +K    ++++  G+LSA   +G I+     F
Sbjct: 152 DVVSWNAMLSGFAQNGFVEEARKIFDQMLVK----NEISWNGLLSAYVQNGRIEDARRLF 207

Query: 182 HSMCLEYGITANARHYTCMIDLLGRSGRLEEAEALMRNMPFEPDAATWGALL 337
            S  +++ I +    + C++    R  RL++A +L   MP   D  +W  ++
Sbjct: 208 DSK-MDWEIVS----WNCLMGGYVRKKRLDDARSLFDRMPVR-DKISWNIMI 253


>ref|XP_004137551.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g02750-like [Cucumis sativus]
          Length = 776

 Score =  194 bits (492), Expect = 8e-48
 Identities = 92/126 (73%), Positives = 110/126 (87%)
 Frame = +2

Query: 2   DLVAWNTMITCYAKHGFGKEALKVFDSMKMKDIKPDDVTMVGVLSACSHSGLIDKGTGYF 181
           D+V+WNTMI  YA+HGFGKEAL +F+SMKM  IKPDDVT+VGVLSACSH+G +DKG  YF
Sbjct: 470 DIVSWNTMIAGYARHGFGKEALALFESMKMT-IKPDDVTLVGVLSACSHTGFVDKGMEYF 528

Query: 182 HSMCLEYGITANARHYTCMIDLLGRSGRLEEAEALMRNMPFEPDAATWGALLGASRVHRN 361
           +SM   YGITANA+HYTCMIDLLGR+GRL+EA  LM++MPF PDAATWGALLGASR+H +
Sbjct: 529 NSMYQNYGITANAKHYTCMIDLLGRAGRLDEALNLMKSMPFYPDAATWGALLGASRIHGD 588

Query: 362 TKLAEE 379
           T+L E+
Sbjct: 589 TELGEK 594



 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 34/112 (30%), Positives = 64/112 (57%)
 Frame = +2

Query: 2   DLVAWNTMITCYAKHGFGKEALKVFDSMKMKDIKPDDVTMVGVLSACSHSGLIDKGTGYF 181
           D+V+WN M++ +A++GF +EA K+FD M +K    ++++  G+LSA   +G I+     F
Sbjct: 152 DVVSWNAMLSGFAQNGFVEEARKIFDQMLVK----NEISWNGLLSAYVQNGRIEDARRLF 207

Query: 182 HSMCLEYGITANARHYTCMIDLLGRSGRLEEAEALMRNMPFEPDAATWGALL 337
            S  +++ I +    + C++    R  RL++A +L   MP   D  +W  ++
Sbjct: 208 DSK-MDWEIVS----WNCLMGGYVRKKRLDDARSLFDRMPVR-DKISWNIMI 253


>ref|XP_003524347.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g02750-like [Glycine max]
          Length = 750

 Score =  193 bits (490), Expect = 1e-47
 Identities = 87/126 (69%), Positives = 108/126 (85%)
 Frame = +2

Query: 2   DLVAWNTMITCYAKHGFGKEALKVFDSMKMKDIKPDDVTMVGVLSACSHSGLIDKGTGYF 181
           D+V+WNTM+  YA+HGFG++AL VF+SM    +KPD++TMVGVLSACSH+GL D+GT YF
Sbjct: 443 DIVSWNTMLAGYARHGFGRQALTVFESMITAGVKPDEITMVGVLSACSHTGLTDRGTEYF 502

Query: 182 HSMCLEYGITANARHYTCMIDLLGRSGRLEEAEALMRNMPFEPDAATWGALLGASRVHRN 361
           HSM  +YGIT N++HY CMIDLLGR+G LEEA+ L+RNMPFEPDAATWGALLGASR+H N
Sbjct: 503 HSMNKDYGITPNSKHYACMIDLLGRAGCLEEAQNLIRNMPFEPDAATWGALLGASRIHGN 562

Query: 362 TKLAEE 379
            +L E+
Sbjct: 563 MELGEQ 568