BLASTX nr result

ID: Coptis23_contig00017144 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00017144
         (2134 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI32919.3| unnamed protein product [Vitis vinifera]              117   9e-24
ref|XP_002316602.1| predicted protein [Populus trichocarpa] gi|2...   115   5e-23
emb|CAN74740.1| hypothetical protein VITISV_040899 [Vitis vinifera]   112   5e-22
dbj|BAK06595.1| predicted protein [Hordeum vulgare subsp. vulgare]    105   6e-20
ref|XP_002316601.1| predicted protein [Populus trichocarpa] gi|2...   102   5e-19

>emb|CBI32919.3| unnamed protein product [Vitis vinifera]
          Length = 411

 Score =  117 bits (294), Expect = 9e-24
 Identities = 117/403 (29%), Positives = 178/403 (44%), Gaps = 8/403 (1%)
 Frame = -3

Query: 1814 KDEERLSCLHEPLIYHILSFLDMKEVVQTSILSKRWRNIWRSVRILNF-HEYAWTNDGTS 1638
            K  +R+S L + ++ HI+SFL  K  V TS+LSKRWR +W S+  L+F  +     D   
Sbjct: 7    KSRDRISNLPDAVLCHIISFLPTKFAVGTSVLSKRWRYLWASIPNLDFDDDLLLDRDKPI 66

Query: 1637 DINKRKLKF--FIDTVLLLRDGSDIDKFDLNFCTHCGDCGRIDRWIAYAVKRRVQVLTL- 1467
              ++R + F  F+D VLL    S I KF L    H  D   ++ WI  A++R VQ L L 
Sbjct: 67   GDSERSICFKNFVDKVLLHGSISCIRKFRLKCSDHELD-SAVNSWICTALERNVQELDLY 125

Query: 1466 --ASVPISSPKSICLSGGVNTLDLAAIILPGDKNRNLFLDLPIVENLIIASCDHDGLNIL 1293
                 PI  P        +  L L                 P++E L+I     D   + 
Sbjct: 126  FDTEYPIELPPKFFFCKTLVVLKLC----------------PVLEELVIERWRLDEQWVF 169

Query: 1292 GISGPKLKYLRLDNAFQDFNRGTSIKINAPNLISLKCNGYTYEDYTLENLSALVTAXXXX 1113
             +S P LK L +      +     + ++APNL  L    +  EDY + NLS+LV A    
Sbjct: 170  NVSAPTLKSLAI------YFSKYKLVVDAPNLEYLSITDFVSEDYLMSNLSSLVKAYVNV 223

Query: 1112 XXXXXXXXXXXXXXXETTLKKLVGMRLSGILKGITNAKSLTLSGHGFQAFEELPKMLEGV 933
                               + L   R+  +L+GI+N K L+LSG   +    L  M  G 
Sbjct: 224  GPTIRGIDD----------QILYRGRIYELLRGISNVKHLSLSG---ETLHSLSGMFCGY 270

Query: 932  PI-SFQSLSYLKILEWCDKSY-IHSLAKLLEIFPHLETLVLERTEGFIKXXXXXXXXXXX 759
             + +F S++ L++    D  Y +  L + L+  P+LE L+LE                  
Sbjct: 271  ELPAFHSVTRLEL--EVDYGYGLEFLKEFLDTSPNLEILILENVNK--DECEIEEWTLPL 326

Query: 758  LSFTCILRQLKCIVMQNFGGSENEFKFLEFLLRSALVLEKVDI 630
               TC+   L  + ++ F G + E   +EFLL++A VL+K+ I
Sbjct: 327  QVPTCVELHLNEVEIKKFDGLDYELGAIEFLLKNARVLKKMSI 369


>ref|XP_002316602.1| predicted protein [Populus trichocarpa] gi|222859667|gb|EEE97214.1|
            predicted protein [Populus trichocarpa]
          Length = 460

 Score =  115 bits (288), Expect = 5e-23
 Identities = 115/428 (26%), Positives = 178/428 (41%), Gaps = 31/428 (7%)
 Frame = -3

Query: 1820 TKKDEERLSCLHEPLIYHILSFLDMKEVVQTSILSKRWRNIWRSVRILNFHEYAWTNDGT 1641
            T   E+ +  L + L+ HILSFL  +  V+TSILSK+W ++W+S   L F        G 
Sbjct: 21   TDSGEKSIGNLPDALLEHILSFLSTEAAVRTSILSKKWLHLWKSTTNLTFF-------GL 73

Query: 1640 SDINKRKLKFFIDTVLLLRDGSDIDKFDLNFCTHCGDCGRIDRWIAYAVKRRVQVL---- 1473
                ++    F+D VL LR  S+I +F L+ C    D  R+  WI+ AV R V+ L    
Sbjct: 74   KSPKRKLFMDFVDRVLALRGPSNIVQFYLS-CEVKDDPSRVGTWISAAVNRNVKDLYLEL 132

Query: 1472 -----------------TLASVPISSPKSICLSGGVN-----TLDLAAIILPGDKNRNLF 1359
                             TL  + I+ P  + L   ++      L+L  +I   D +    
Sbjct: 133  RDFEASFVLPHCLFNCETLTELEINMPYILKLPSSISLSCLKILNLYEVIFTDDHSTQQL 192

Query: 1358 LDLPIVENLIIASCDHDGLNILGISGPKLKYLRLDNAFQDFNR---GTSIKINAPNLISL 1188
              LP +  L I  C+   L  + IS PKL+ L +    Q       G  ++I   +L   
Sbjct: 193  FSLPNLVELEIHECNWMNLVAVSISAPKLQSLDIHEPCQSSPASLGGCHVRIFGTHLADF 252

Query: 1187 KCNGYTYEDYTLENLSALVTAXXXXXXXXXXXXXXXXXXXETTLKKLVGMRLSGILKGIT 1008
               G    DY L   S + T                         +    R S +L+GI+
Sbjct: 253  TIIGTLSNDYCLYESSVVETC--------------ISIFSAADKPRQTAYRASKLLEGIS 298

Query: 1007 NAKSLTLSGHGFQAFEELPKMLEGVPISFQSLSYLKILEWCDKSYIHS--LAKLLEIFPH 834
            +A+SL L+ +     ++ P++L   P+ F++L+   +L   ++S +HS     ++   PH
Sbjct: 299  SAQSLCLTTNVVDVLDDAPELL-AFPLEFRNLT--SLLFESEESNLHSDGFWHIIYNSPH 355

Query: 833  LETLVLERTEGFIKXXXXXXXXXXXLSFTCILRQLKCIVMQNFGGSENEFKFLEFLLRSA 654
            L  L                      S  C L  LK I +  FGG E E   + FLL++A
Sbjct: 356  LIALQFYGVSMPKVPSNCREDWTLDPSPPCFLSCLKFIQVGRFGGDEKELDAVGFLLKNA 415

Query: 653  LVLEKVDI 630
              LE +DI
Sbjct: 416  TALESMDI 423


>emb|CAN74740.1| hypothetical protein VITISV_040899 [Vitis vinifera]
          Length = 607

 Score =  112 bits (279), Expect = 5e-22
 Identities = 118/447 (26%), Positives = 194/447 (43%), Gaps = 41/447 (9%)
 Frame = -3

Query: 1817 KKDEERLSCLHEPLIYHILSFLDMKEVVQTSILSKRWRNIWRSVRILNFHEYAWTNDGT- 1641
            ++  + +S L + L+ HILSFL  K  V TSILSKRWR +W SV IL+F +  W N  T 
Sbjct: 6    EESRDIISNLPDELLCHILSFLPTKFAVGTSILSKRWRYLWASVPILDFDDELWLNPSTL 65

Query: 1640 SDINKRKLKF--FIDTVLLLRDGSDIDKFDLNFCTHCGDCGRIDRWIAYAVKRRVQVL-- 1473
             ++ +R + F  F+D VL   + S I KF L +     +   +  WI  A++RRVQ L  
Sbjct: 66   VELEERIIMFQNFVDGVLRHSEVSCIKKFRLGY--RDNNLDSVYSWICIALERRVQELDL 123

Query: 1472 ------------------TLASVPISSPKSICLSGGVNTLDLAAIILPG------DKNRN 1365
                              TL  V +S    + +   V    L A+ L        D  + 
Sbjct: 124  HLLIDWRVELPPMFFICKTLVVVKLSCALFLDIPTTVWLPSLKALHLKSVEYSDDDSIQK 183

Query: 1364 LFLDLPIVENLIIASCDHDGLNILGISGPKLKYLRL-------DNAFQDFNRGTSIKINA 1206
            L    P++E L+I   + D   ++ +S P LK LR+        + ++  ++   + ++A
Sbjct: 184  LLSGCPVLEELVIEREERDNQWVVNVSNPSLKILRIFFFTDGFAHPYEQEDQDYKVVVDA 243

Query: 1205 PNLISLKCNGYTYEDYTLENLSALVTAXXXXXXXXXXXXXXXXXXXETTLKKLVGMRLSG 1026
            PNL  L    Y  +DY +++L +LV A                           G+   G
Sbjct: 244  PNLEYLSITDYLSKDYFVKDLPSLVKAFIDVEQDSEEFEESPHNG---------GISYHG 294

Query: 1025 ----ILKGITNAKSLTLSGHGFQAFEELPKMLEGVPI-SFQSLSYLKILEWCDKSYIHSL 861
                +L  I+N K L+L+G      + L   +    + +F +++ L+ L +        L
Sbjct: 295  PIYELLGRISNVKCLSLTG---VTLDSLSGTIGDYKLPTFHNMTRLEFL-FIGGFNWDFL 350

Query: 860  AKLLEIFPHLETLVLERTEGFIKXXXXXXXXXXXLSFTCILRQLKCIVMQNFGGSENEFK 681
               L   P+LE LV+E   G+                 C++  LK I ++   G + E +
Sbjct: 351  PNFLHSSPNLEALVIE--TGYTNELIPEGWLMPLQVPACLVLHLKEIEIRRIVGEDYELE 408

Query: 680  FLEFLLRSALVLEKVDITSTTKSSDME 600
             +E+LL++A VL+++ I       D E
Sbjct: 409  AVEYLLKNAEVLQQMTIDCHESYMDQE 435


>dbj|BAK06595.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 384

 Score =  105 bits (261), Expect = 6e-20
 Identities = 81/229 (35%), Positives = 123/229 (53%), Gaps = 2/229 (0%)
 Frame = -3

Query: 1805 ERLSCLHEPLIYHILSFLDMKEVVQTSILSKRWRNIWRSVRILNFHEYAWTNDGTSDINK 1626
            +RLS L + L++H++SFL M EVV+TS+LS RWR +WRS   +         DG   ++K
Sbjct: 22   DRLSSLPDDLLHHVMSFLPMPEVVRTSLLSPRWRFVWRSTPFIRI-------DGAEFMDK 74

Query: 1625 RKLKFFIDTVLLLRD-GSDIDKFDLNFCTHCGDCGRIDRWIAYAVKRRVQVLTLASVPIS 1449
             KL+ F+D +LLL D  + +DK  ++   HC D  +   WI +A+  +V+VL + S P+S
Sbjct: 75   SKLENFVDCLLLLHDYTASLDKARISL--HCIDHTKCSVWIRHAIMHKVRVLHI-SGPLS 131

Query: 1448 SPK-SICLSGGVNTLDLAAIILPGDKNRNLFLDLPIVENLIIASCDHDGLNILGISGPKL 1272
              K +I  S  + T+ L + IL     R L  D P++E+L +  C+    +   IS   L
Sbjct: 132  LDKTAIFPSQHLKTIRLQSAILRHGLFRPLNYDCPVLEHLELELCNF--CDNEEISSTSL 189

Query: 1271 KYLRLDNAFQDFNRGTSIKINAPNLISLKCNGYTYEDYTLENLSALVTA 1125
            K L +   +      TS+ I A NL  L        D   ++LS+LVTA
Sbjct: 190  KVLHISQCYLT----TSLLICARNLTHLSILDPYIGDIVTKDLSSLVTA 234


>ref|XP_002316601.1| predicted protein [Populus trichocarpa] gi|222859666|gb|EEE97213.1|
            predicted protein [Populus trichocarpa]
          Length = 420

 Score =  102 bits (253), Expect = 5e-19
 Identities = 103/362 (28%), Positives = 160/362 (44%), Gaps = 45/362 (12%)
 Frame = -3

Query: 1841 AANKKVMTKKDEERLSCLHEPLIYHILSFLDMKEVVQTSILSKRWRNIWRSVRILNFHEY 1662
            A  K+ M     + ++ L + L+ HILSFL+ K+ V+TSILS++W ++W+S+  L FH+ 
Sbjct: 26   ADQKQDMDDSGGKSINDLPDALLQHILSFLETKDAVRTSILSRKWEHLWKSLSNLEFHQC 85

Query: 1661 AWTNDGTSDINKRKLKFF---IDTVLLLRDGSDIDKFDLNFCTHCG--DCGRIDRWIAYA 1497
             +         K K K F   ++ VLLLRD S+I+KF L+    CG  D  R   W++ A
Sbjct: 86   YF---------KAKRKIFMNSVERVLLLRDSSNIEKFTLS----CGIDDATRTRTWVSAA 132

Query: 1496 VKRRVQVL-----------------------TLASVPISSPKSICLSGGVN-----TLDL 1401
            V R V+ L                       TL  + I+S   + LS  ++      L L
Sbjct: 133  VNRNVKELCVNFYEGGESESFVSPLCLFTCATLTKLKITSHGVLRLSSSISLPCLKILSL 192

Query: 1400 AAIILPGDKNRNLFLDLPIVENLIIASCDHDGLNILGISGPKLKYLRLDNAFQDFNRGTS 1221
              ++ P + +    L+L  +E L I+  D   L  + IS PKL+ L +    ++  RG+ 
Sbjct: 193  QHVVFPDEDSTQQILNLRTLEKLKISYYDWKNLKAITISAPKLRSLDICEMHRNDLRGSD 252

Query: 1220 ---IKINAPNLISLKCNGYTYEDYTLENLSALVTAXXXXXXXXXXXXXXXXXXXETTLKK 1050
               + I    L     +G  ++DY L   S+LV A                        +
Sbjct: 253  ACHVMIFGTALTFFSFSGGFWDDYCLFKSSSLVEAYFHVYGCYER-------------SR 299

Query: 1049 LVGMRLSGILKGITNAKSLTLSGH--GFQAFEELPK-------MLEGVPISFQSLSYLKI 897
             +  R    + G++  K LTL+      +  EELP        +LE VP  FQS   LK 
Sbjct: 300  EIAHRAYKHIVGLSTVKHLTLTPDVLKIELSEELPTNCAKDDWILEPVPPCFQSC--LKC 357

Query: 896  LE 891
            +E
Sbjct: 358  IE 359


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