BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00017143
         (1499 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275084.1| PREDICTED: RING-H2 finger protein ATL72 [Vit...   208   3e-51
ref|XP_002520866.1| RING-H2 finger protein ATL3C, putative [Rici...   206   1e-50
ref|XP_003528016.1| PREDICTED: RING-H2 finger protein ATL72-like...   190   1e-45
ref|XP_002323073.1| predicted protein [Populus trichocarpa] gi|2...   189   1e-45
ref|XP_002271473.1| PREDICTED: RING-H2 finger protein ATL72-like...   189   2e-45

>ref|XP_002275084.1| PREDICTED: RING-H2 finger protein ATL72 [Vitis vinifera]
            gi|147769463|emb|CAN70348.1| hypothetical protein
            VITISV_012580 [Vitis vinifera]
            gi|297736494|emb|CBI25365.3| unnamed protein product
            [Vitis vinifera]
          Length = 197

 Score =  208 bits (529), Expect = 3e-51
 Identities = 103/165 (62%), Positives = 122/165 (73%), Gaps = 5/165 (3%)
 Frame = +1

Query: 919  SYNNEANFDTNMVXXXXXXXXXXXXXXGLNSIIRCALRCGRRIAFETPDETAAR---SGL 1089
            SY NEANFDTNMV              GLNSI+RCALRC RR+AFET DETAAR   +GL
Sbjct: 30   SYTNEANFDTNMVIILAALLCALICALGLNSIVRCALRCSRRLAFETADETAARLAATGL 89

Query: 1090 KKRALRQIPIAVYGSGFDIQATECPICLGDFEDGEKVRVLPKCNHGFHVRCIDTWLAAHS 1269
            KK ALRQIP+AVYGSG +I AT+CPICLG+FE G+KVRVLPKC+HGFH++CIDTWL +HS
Sbjct: 90   KKSALRQIPVAVYGSGTNIPATDCPICLGEFEQGDKVRVLPKCHHGFHMKCIDTWLVSHS 149

Query: 1270 SCPTCRRSLLEKPAPSNATDINVE--ILQSGHLFPEQGGATINVD 1398
            SCPTCR SLLE P  S+A D++V+  I   G+    Q   ++ VD
Sbjct: 150  SCPTCRHSLLEHPPASDAVDVHVDTGIRHPGNAPGGQPDVSVGVD 194


>ref|XP_002520866.1| RING-H2 finger protein ATL3C, putative [Ricinus communis]
            gi|223539997|gb|EEF41575.1| RING-H2 finger protein ATL3C,
            putative [Ricinus communis]
          Length = 208

 Score =  206 bits (525), Expect = 1e-50
 Identities = 106/166 (63%), Positives = 120/166 (72%), Gaps = 6/166 (3%)
 Frame = +1

Query: 919  SYNNEANFDTNMVXXXXXXXXXXXXXXGLNSIIRCALRCGRRIAFETPDETAAR---SGL 1089
            SY NEANFDTNMV              GLNSI+RCALRC RR AFETPDE AAR   +GL
Sbjct: 32   SYTNEANFDTNMVIILAALLCALICALGLNSIVRCALRCSRRFAFETPDEAAARLAATGL 91

Query: 1090 KKRALRQIPIAVYGS-GFDIQATECPICLGDFEDGEKVRVLPKCNHGFHVRCIDTWLAAH 1266
            KK ALRQIP+ +YG+ G  I AT+C ICLG+F DGEKVRVLPKCNHGFHVRCIDTWL +H
Sbjct: 92   KKSALRQIPVVIYGAAGIQIIATDCAICLGEFSDGEKVRVLPKCNHGFHVRCIDTWLGSH 151

Query: 1267 SSCPTCRRSLLEKPAPSN--ATDINVEILQSGHLFPEQGGATINVD 1398
            SSCPTCR+SLLE+PAP N  AT+ +VEI   G+      GA +  D
Sbjct: 152  SSCPTCRQSLLEQPAPGNSDATEPDVEIRSHGN------GAVLQTD 191


>ref|XP_003528016.1| PREDICTED: RING-H2 finger protein ATL72-like [Glycine max]
          Length = 198

 Score =  190 bits (482), Expect = 1e-45
 Identities = 94/142 (66%), Positives = 104/142 (73%), Gaps = 4/142 (2%)
 Frame = +1

Query: 919  SYNNEANFDTNMVXXXXXXXXXXXXXXGLNSIIRCALRCGRRIAFETPDETAAR---SGL 1089
            ++  +ANFDTNMV              GLNSI+RCALRC RR AFETP+ETAAR    GL
Sbjct: 28   TFTGDANFDTNMVIILAALLCALICALGLNSIVRCALRCSRRFAFETPEETAARLVAKGL 87

Query: 1090 KKRALRQIPIAVYGSGF-DIQATECPICLGDFEDGEKVRVLPKCNHGFHVRCIDTWLAAH 1266
            KK AL QIPI VYGSG   I AT+CPICLG+F DGEKVRVLPKCNHGFHVRCIDTWL +H
Sbjct: 88   KKSALHQIPIVVYGSGSASIAATDCPICLGEFVDGEKVRVLPKCNHGFHVRCIDTWLLSH 147

Query: 1267 SSCPTCRRSLLEKPAPSNATDI 1332
            SSCP CR+SLLE P  S A  +
Sbjct: 148  SSCPNCRQSLLEHPTISGAVAV 169


>ref|XP_002323073.1| predicted protein [Populus trichocarpa] gi|222867703|gb|EEF04834.1|
            predicted protein [Populus trichocarpa]
          Length = 186

 Score =  189 bits (481), Expect = 1e-45
 Identities = 92/142 (64%), Positives = 101/142 (71%), Gaps = 3/142 (2%)
 Frame = +1

Query: 907  KPHGSYNNEANFDTNMVXXXXXXXXXXXXXXGLNSIIRCALRCGRRIAFETPDETAAR-- 1080
            + H SY NE NFDTNMV              GLNSI+RC LRC  R A ET +E AAR  
Sbjct: 20   RTHDSYINETNFDTNMVIILAALLCALIGALGLNSIVRCLLRCSSRFALETTEEAAARLA 79

Query: 1081 -SGLKKRALRQIPIAVYGSGFDIQATECPICLGDFEDGEKVRVLPKCNHGFHVRCIDTWL 1257
             +GLKKR LRQIP+A+YG+G  I ATECPICLG+F DGEKVRVLPKCNHGFHVRCIDTWL
Sbjct: 80   ATGLKKRDLRQIPVAIYGAGGSISATECPICLGEFVDGEKVRVLPKCNHGFHVRCIDTWL 139

Query: 1258 AAHSSCPTCRRSLLEKPAPSNA 1323
             +HSSCP CR SLLE    S A
Sbjct: 140  LSHSSCPNCRHSLLEHTTDSGA 161


>ref|XP_002271473.1| PREDICTED: RING-H2 finger protein ATL72-like [Vitis vinifera]
          Length = 195

 Score =  189 bits (480), Expect = 2e-45
 Identities = 93/154 (60%), Positives = 109/154 (70%)
 Frame = +1

Query: 913  HGSYNNEANFDTNMVXXXXXXXXXXXXXXGLNSIIRCALRCGRRIAFETPDETAARSGLK 1092
            H +Y NE NFDTNMV              GLNSI+RCA+RC RR++ E+  + A  +GLK
Sbjct: 33   HEAYVNETNFDTNMVIILAALLCALIGALGLNSIVRCAMRCSRRLSPESQGQAA--TGLK 90

Query: 1093 KRALRQIPIAVYGSGFDIQATECPICLGDFEDGEKVRVLPKCNHGFHVRCIDTWLAAHSS 1272
            KRALRQIP+AVYG G +I ATECPICLG+F  GEKVRVLPKCNHGFHVRCIDTWL +HSS
Sbjct: 91   KRALRQIPVAVYGPGVEIPATECPICLGEFVQGEKVRVLPKCNHGFHVRCIDTWLVSHSS 150

Query: 1273 CPTCRRSLLEKPAPSNATDINVEILQSGHLFPEQ 1374
            CP CR SLLE+P  S+A         +G + PEQ
Sbjct: 151  CPNCRHSLLERPTTSDA---------AGEVAPEQ 175