BLASTX nr result

ID: Coptis23_contig00017142 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00017142
         (524 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_189339.1| uncharacterized protein [Arabidopsis thaliana] ...    93   3e-17
ref|XP_002877012.1| hypothetical protein ARALYDRAFT_322830 [Arab...    93   3e-17
ref|XP_004138621.1| PREDICTED: uncharacterized protein LOC101211...    89   4e-16
ref|XP_002270842.1| PREDICTED: uncharacterized protein LOC100261...    87   1e-15
ref|XP_002298636.1| predicted protein [Populus trichocarpa] gi|2...    87   1e-15

>ref|NP_189339.1| uncharacterized protein [Arabidopsis thaliana]
           gi|332643737|gb|AEE77258.1| uncharacterized protein
           [Arabidopsis thaliana]
          Length = 142

 Score = 92.8 bits (229), Expect = 3e-17
 Identities = 44/73 (60%), Positives = 52/73 (71%)
 Frame = -1

Query: 434 FEITMADWAPVLIGVVLFILLSPGLLFQLPGNNRAMDFGGMKTNGKAXXXXXXXXXXXXX 255
           F  +MADWAPVL+GVVLF++LSPGLLF LPGNNR +DFGG+KTNGKA             
Sbjct: 70  FSTSMADWAPVLVGVVLFVILSPGLLFSLPGNNRTVDFGGLKTNGKAIAVHTLIFFAIYT 129

Query: 254 XXXLAVRVHIYTG 216
              LA+ +HIYTG
Sbjct: 130 ILILALNLHIYTG 142



 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 26/66 (39%), Positives = 38/66 (57%)
 Frame = -1

Query: 422 MADWAPVLIGVVLFILLSPGLLFQLPGNNRAMDFGGMKTNGKAXXXXXXXXXXXXXXXXL 243
           M DW PV + V LF+LL+PGLL Q+PG  R ++FG  +T+G +                L
Sbjct: 1   MPDWGPVFVAVTLFVLLTPGLLIQVPGRGRVVEFGTFQTSGLSVIVHTLIYFTLVCILLL 60

Query: 242 AVRVHI 225
           A+++HI
Sbjct: 61  ALQIHI 66


>ref|XP_002877012.1| hypothetical protein ARALYDRAFT_322830 [Arabidopsis lyrata subsp.
           lyrata] gi|297322850|gb|EFH53271.1| hypothetical protein
           ARALYDRAFT_322830 [Arabidopsis lyrata subsp. lyrata]
          Length = 142

 Score = 92.8 bits (229), Expect = 3e-17
 Identities = 44/73 (60%), Positives = 52/73 (71%)
 Frame = -1

Query: 434 FEITMADWAPVLIGVVLFILLSPGLLFQLPGNNRAMDFGGMKTNGKAXXXXXXXXXXXXX 255
           F  +MADWAPVL+GVVLF++LSPGLLF LPGNNR +DFGG+KTNGKA             
Sbjct: 70  FSTSMADWAPVLVGVVLFVILSPGLLFSLPGNNRTVDFGGLKTNGKAIAVHTLIFFAIYS 129

Query: 254 XXXLAVRVHIYTG 216
              LA+ +HIYTG
Sbjct: 130 ILILALNLHIYTG 142



 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 26/66 (39%), Positives = 38/66 (57%)
 Frame = -1

Query: 422 MADWAPVLIGVVLFILLSPGLLFQLPGNNRAMDFGGMKTNGKAXXXXXXXXXXXXXXXXL 243
           M DW PV + V LF+LL+PGLL Q+PG  R ++FG  +T+G +                L
Sbjct: 1   MPDWGPVFVAVTLFVLLTPGLLIQVPGRGRVVEFGTFQTSGLSVIVHTLIYFTLVCILLL 60

Query: 242 AVRVHI 225
           A+++HI
Sbjct: 61  ALQIHI 66


>ref|XP_004138621.1| PREDICTED: uncharacterized protein LOC101211888 [Cucumis sativus]
           gi|449531380|ref|XP_004172664.1| PREDICTED:
           uncharacterized LOC101211888 [Cucumis sativus]
          Length = 142

 Score = 89.0 bits (219), Expect = 4e-16
 Identities = 43/70 (61%), Positives = 49/70 (70%)
 Frame = -1

Query: 425 TMADWAPVLIGVVLFILLSPGLLFQLPGNNRAMDFGGMKTNGKAXXXXXXXXXXXXXXXX 246
           TM+DWAPV+IGVVLF+LLSPGLLFQ PGNNR  +FG MKTNGKA                
Sbjct: 73  TMSDWAPVVIGVVLFVLLSPGLLFQFPGNNRQFEFGSMKTNGKAVAIHTLIFFVLYAVFI 132

Query: 245 LAVRVHIYTG 216
           LA+ +HIYTG
Sbjct: 133 LALHIHIYTG 142



 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 31/69 (44%), Positives = 43/69 (62%)
 Frame = -1

Query: 422 MADWAPVLIGVVLFILLSPGLLFQLPGNNRAMDFGGMKTNGKAXXXXXXXXXXXXXXXXL 243
           MADW PV + V+LF+LL+PGLL Q+PG +R ++FG  +T+G +                L
Sbjct: 1   MADWGPVFVAVMLFVLLTPGLLVQMPGKSRFVEFGNFQTSGVSILVHSILYFALICIFLL 60

Query: 242 AVRVHIYTG 216
           AVRVH+Y G
Sbjct: 61  AVRVHVYNG 69


>ref|XP_002270842.1| PREDICTED: uncharacterized protein LOC100261671 [Vitis vinifera]
          Length = 140

 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 42/69 (60%), Positives = 50/69 (72%)
 Frame = -1

Query: 422 MADWAPVLIGVVLFILLSPGLLFQLPGNNRAMDFGGMKTNGKAXXXXXXXXXXXXXXXXL 243
           MADWAPVL+GVVLF+LLSPGLLFQLPG+ R +DFGGMKTNGK+                +
Sbjct: 72  MADWAPVLVGVVLFVLLSPGLLFQLPGHYRHVDFGGMKTNGKSIAVHTLIFVAIFAVLIM 131

Query: 242 AVRVHIYTG 216
           A+ +HIYTG
Sbjct: 132 ALHLHIYTG 140


>ref|XP_002298636.1| predicted protein [Populus trichocarpa] gi|222845894|gb|EEE83441.1|
           predicted protein [Populus trichocarpa]
          Length = 69

 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 43/69 (62%), Positives = 48/69 (69%)
 Frame = -1

Query: 422 MADWAPVLIGVVLFILLSPGLLFQLPGNNRAMDFGGMKTNGKAXXXXXXXXXXXXXXXXL 243
           MADW PV+IGVVLF+LL PGLLFQLPGNN+ +DFG +KTNGKA                L
Sbjct: 1   MADWGPVVIGVVLFVLLQPGLLFQLPGNNKHVDFGSLKTNGKAIAVHTLIFFTAYAILIL 60

Query: 242 AVRVHIYTG 216
           AV VHIYTG
Sbjct: 61  AVHVHIYTG 69


Top