BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00017136
         (1007 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280859.2| PREDICTED: histone deacetylase 5-like [Vitis...   306   4e-81
ref|XP_002305854.1| histone deacetylase [Populus trichocarpa] gi...   304   3e-80
emb|CAN77962.1| hypothetical protein VITISV_022948 [Vitis vinifera]   303   6e-80
ref|XP_002514660.1| histone deacetylase hda1, putative [Ricinus ...   297   3e-78
gb|ACF80379.1| unknown [Zea mays]                                     273   5e-71

>ref|XP_002280859.2| PREDICTED: histone deacetylase 5-like [Vitis vinifera]
            gi|297733877|emb|CBI15124.3| unnamed protein product
            [Vitis vinifera]
          Length = 646

 Score =  306 bits (785), Expect = 4e-81
 Identities = 143/248 (57%), Positives = 188/248 (75%), Gaps = 1/248 (0%)
 Frame = -2

Query: 961  QVDEVQNVIQD-LSMLKVNGATHNRVVDESVLWRSVLSKVDIWYASFGSNMWKPRFLCYI 785
            + + ++ V+QD LS LKV+  +H+ V      WRS LSK+D+WYASFGSNMWK RFLCYI
Sbjct: 404  RAENLEAVVQDGLSKLKVDEDSHDLVAT----WRSELSKIDVWYASFGSNMWKSRFLCYI 459

Query: 784  EGGKVDGMQRSCCGSMDRSPPKSVMWKIAPHRLFFGRSHTRQWGTGGVAFLHPQSSKDST 605
            EGG+++GM++ C GS+DR+PPK +MWK  PHRLFFGR H+  WG GGVAFL+P+ +    
Sbjct: 460  EGGQLEGMEKRCSGSVDRNPPKEIMWKTVPHRLFFGRDHSSTWGPGGVAFLNPEENNQDR 519

Query: 604  AYTCLYKITLEQFNDILLQENCQHVSVSSPLFDLNTLDSAIRNKFIPLEALKGGWYSNVL 425
            AY CLY+ITLEQFND+LLQEN     +SSPLFDL  L+S    + I +E  K GWY +VL
Sbjct: 520  AYICLYRITLEQFNDVLLQENASSYDISSPLFDLVALNSIADKQSISVE-FKSGWYRSVL 578

Query: 424  YLGTEDNLPVLTMTCPLSDLESYSTGKLPLAAPPKSYVDTLVKGLVEGKQLSNEEAIAYI 245
            YLG E ++P+LT+TCPLSD+E++ +G LP++AP K Y +T+++GL EGKQLS EEAIAYI
Sbjct: 579  YLGKECDIPILTLTCPLSDVEAFKSGDLPMSAPSKEYANTIIRGLTEGKQLSEEEAIAYI 638

Query: 244  NDASARLL 221
             +AS + L
Sbjct: 639  QEASTKPL 646


>ref|XP_002305854.1| histone deacetylase [Populus trichocarpa] gi|222848818|gb|EEE86365.1|
            histone deacetylase [Populus trichocarpa]
          Length = 646

 Score =  304 bits (778), Expect = 3e-80
 Identities = 146/243 (60%), Positives = 175/243 (72%)
 Frame = -2

Query: 949  VQNVIQDLSMLKVNGATHNRVVDESVLWRSVLSKVDIWYASFGSNMWKPRFLCYIEGGKV 770
            VQ V++  S LKV     ++V   S  WRS LSK+DIWYASFGSNMWKPRFLCYIEGG+V
Sbjct: 404  VQEVMEPFSKLKVED-NQDQVATSSTSWRSELSKIDIWYASFGSNMWKPRFLCYIEGGQV 462

Query: 769  DGMQRSCCGSMDRSPPKSVMWKIAPHRLFFGRSHTRQWGTGGVAFLHPQSSKDSTAYTCL 590
            DGM++ C GSMD++ PK ++WK  PHRL+FGR  TR WG GGVAFLHP +S     Y CL
Sbjct: 463  DGMKKPCTGSMDKNLPKEILWKNFPHRLYFGRDSTRTWGPGGVAFLHPDNSVGEKTYMCL 522

Query: 589  YKITLEQFNDILLQENCQHVSVSSPLFDLNTLDSAIRNKFIPLEALKGGWYSNVLYLGTE 410
            YKITLEQFND+LLQEN     ++SP+FDL  L S      I LE  K GWY NV+YLG E
Sbjct: 523  YKITLEQFNDVLLQENVPSYQMNSPVFDLAALQSIKNKGSISLEVFKSGWYRNVVYLGNE 582

Query: 409  DNLPVLTMTCPLSDLESYSTGKLPLAAPPKSYVDTLVKGLVEGKQLSNEEAIAYINDASA 230
             ++P+LTMTC +SD ES+  G+ PL  P K Y +TLVKGLVE  QLS EEAIAYI +AS+
Sbjct: 583  RDIPILTMTCSISDAESFKLGEFPLRRPSKEYANTLVKGLVESGQLSEEEAIAYIEEASS 642

Query: 229  RLL 221
            + L
Sbjct: 643  KPL 645


>emb|CAN77962.1| hypothetical protein VITISV_022948 [Vitis vinifera]
          Length = 345

 Score =  303 bits (775), Expect = 6e-80
 Identities = 142/246 (57%), Positives = 185/246 (75%), Gaps = 1/246 (0%)
 Frame = -2

Query: 955 DEVQNVIQD-LSMLKVNGATHNRVVDESVLWRSVLSKVDIWYASFGSNMWKPRFLCYIEG 779
           + ++ V+QD LS LKV+  +H+ V      WRS LSK+D+WYASFGSN WK RFLCYIEG
Sbjct: 105 ENLEAVVQDGLSKLKVDEDSHDLVAT----WRSELSKIDVWYASFGSNXWKSRFLCYIEG 160

Query: 778 GKVDGMQRSCCGSMDRSPPKSVMWKIAPHRLFFGRSHTRQWGTGGVAFLHPQSSKDSTAY 599
           G+++GM++ C GS+DR+PPK +MWK  PHRLFFGR H+  WG GGVAFL+P+ +    AY
Sbjct: 161 GQLEGMEKRCSGSVDRNPPKEIMWKTVPHRLFFGRDHSSXWGPGGVAFLNPEENNQDRAY 220

Query: 598 TCLYKITLEQFNDILLQENCQHVSVSSPLFDLNTLDSAIRNKFIPLEALKGGWYSNVLYL 419
            CLY+ITLEQFND+LLQEN     +SSPLFDL  L+S    + I +E  K GWY +VLYL
Sbjct: 221 ICLYRITLEQFNDVLLQENASSYDISSPLFDLVALNSIADKQSISVE-FKSGWYRSVLYL 279

Query: 418 GTEDNLPVLTMTCPLSDLESYSTGKLPLAAPPKSYVDTLVKGLVEGKQLSNEEAIAYIND 239
           G E ++P+LT TCPLSD+E++ +G LP++AP K Y +T+++GL EGKQLS EEAIAYI +
Sbjct: 280 GKECDIPILTXTCPLSDVEAFKSGDLPMSAPSKEYANTIIRGLTEGKQLSEEEAIAYIQE 339

Query: 238 ASARLL 221
           AS + L
Sbjct: 340 ASTKPL 345


>ref|XP_002514660.1| histone deacetylase hda1, putative [Ricinus communis]
            gi|223546264|gb|EEF47766.1| histone deacetylase hda1,
            putative [Ricinus communis]
          Length = 654

 Score =  297 bits (760), Expect = 3e-78
 Identities = 137/240 (57%), Positives = 180/240 (75%)
 Frame = -2

Query: 940  VIQDLSMLKVNGATHNRVVDESVLWRSVLSKVDIWYASFGSNMWKPRFLCYIEGGKVDGM 761
            +++ LS LKV    ++++  +S+ WRS LSK +IWYA++GSNMWK RFLCYI+GG+V+GM
Sbjct: 416  LVEPLSKLKVEEG-YDQLATKSIPWRSELSKTEIWYATYGSNMWKSRFLCYIQGGQVEGM 474

Query: 760  QRSCCGSMDRSPPKSVMWKIAPHRLFFGRSHTRQWGTGGVAFLHPQSSKDSTAYTCLYKI 581
            ++ C GSMDR PPK ++W+I PHRLFFGR  T  WG GGVAF+HP SS D   Y C+Y+I
Sbjct: 475  KKPCSGSMDRKPPKDILWRIFPHRLFFGRESTLTWGLGGVAFVHPASSADEKTYFCMYRI 534

Query: 580  TLEQFNDILLQENCQHVSVSSPLFDLNTLDSAIRNKFIPLEALKGGWYSNVLYLGTEDNL 401
            TLEQF D+LLQEN  + ++SSP+FD   L S I    + LE  K GWY NV+YLG E N+
Sbjct: 535  TLEQFVDVLLQENVPNYNMSSPVFDSAALQSVINQGSMSLEVFKRGWYHNVVYLGQEQNI 594

Query: 400  PVLTMTCPLSDLESYSTGKLPLAAPPKSYVDTLVKGLVEGKQLSNEEAIAYINDASARLL 221
            P+LTMTCP S++ES+ +G+LPL AP K Y +TL+KGLVEG +LS E+AI YI +AS + L
Sbjct: 595  PILTMTCPPSNVESFKSGELPLCAPSKEYANTLIKGLVEGGKLSEEQAIDYIKEASIKPL 654


>gb|ACF80379.1| unknown [Zea mays]
          Length = 354

 Score =  273 bits (698), Expect = 5e-71
 Identities = 131/233 (56%), Positives = 162/233 (69%), Gaps = 9/233 (3%)
 Frame = -2

Query: 892 RVVDESVLWRSVLSKVDIWYASFGSNMWKPRFLCYIEGGKVDGMQRSCCGSMDRSPPKSV 713
           ++ D S+ WRS LSK D+WYASFGSNMW+PRFLCYI+GGK +GM   CCGS D S PK  
Sbjct: 122 KISDLSLEWRSDLSKTDVWYASFGSNMWRPRFLCYIQGGKAEGMNIPCCGSRDTSSPKGT 181

Query: 712 MWKIAPHRLFFGRSHTRQWGTGGVAFLHPQSSKDSTAYTCLYKITLEQFNDILLQEN--- 542
           +WK  PHRL FGRS T  WGTGGVAFL+P+ + +  +Y C+YKITLEQFNDIL QEN   
Sbjct: 182 VWKTVPHRLLFGRSSTPCWGTGGVAFLNPEINYNEKSYVCMYKITLEQFNDILFQENRLV 241

Query: 541 ------CQHVSVSSPLFDLNTLDSAIRNKFIPLEALKGGWYSNVLYLGTEDNLPVLTMTC 380
                    V   SPL   + +     N+ + LE +K  WYSNVLYLG ED +P+LTMTC
Sbjct: 242 LEDGKDGNTVYPDSPLIGSSEIKFISTNRAVHLEPIKDSWYSNVLYLGNEDEVPILTMTC 301

Query: 379 PLSDLESYSTGKLPLAAPPKSYVDTLVKGLVEGKQLSNEEAIAYINDASARLL 221
           P SD+E Y +G+L LA P ++Y  TL+KGLVEGKQ+  + A +YIN A+AR L
Sbjct: 302 PASDIERYKSGELRLAPPSETYAATLIKGLVEGKQMDADGAASYINAAAARAL 354