BLASTX nr result

ID: Coptis23_contig00017127 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00017127
         (1531 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274325.2| PREDICTED: uncharacterized protein LOC100242...   350   4e-94
ref|XP_002319380.1| predicted protein [Populus trichocarpa] gi|2...   331   4e-88
emb|CBI28387.3| unnamed protein product [Vitis vinifera]              323   1e-85
ref|XP_002517989.1| conserved hypothetical protein [Ricinus comm...   317   5e-84
ref|XP_002869515.1| EMB1923 [Arabidopsis lyrata subsp. lyrata] g...   288   3e-75

>ref|XP_002274325.2| PREDICTED: uncharacterized protein LOC100242621 [Vitis vinifera]
          Length = 357

 Score =  350 bits (899), Expect = 4e-94
 Identities = 189/344 (54%), Positives = 228/344 (66%), Gaps = 8/344 (2%)
 Frame = -2

Query: 1452 KLLLTFPPLHSLSQKPIYSLRRLPSYPTITTQSSK-----ANTFLGLSLKTHGFLLNKKM 1288
            +L L FPP   L  +   +     S PT   Q SK      +   G + K  G L  +K+
Sbjct: 15   RLHLKFPPNALLFLRNPSNTLAFCSSPT-RIQLSKPQIQYTHNLFGFAEKNLGVLRRRKL 73

Query: 1287 GFVCKSENGE---GGERKKEVDESRGESTMPERFRYLTKEAPDRPVRWPWLVALAFGIYA 1117
            GF   +ENGE    G   + ++E+R +STMPERFR+LTKEAPD P+RWPW +AL F +YA
Sbjct: 74   GFCANAENGEEKSNGSGFEGIEEARRQSTMPERFRHLTKEAPDPPLRWPWYIALVFLVYA 133

Query: 1116 WRTVLWELSNWKKAALAIAGFMGYLSKFALAFVFYFIGTPVTSLIRFVETVFYSIRGIYS 937
            WRTVLWELSNW+KAALA+  F GYL K ALA +F+FIG PVTSLIR VET  Y+IR  YS
Sbjct: 134  WRTVLWELSNWRKAALAVVYFAGYLLKLALALIFHFIGNPVTSLIRCVETALYTIRAFYS 193

Query: 936  DIVAAAPVQELTXXXXXXXXXXXXXXXXVPDSANSQPYMLTLAGIIGFAAVMDYIPELVF 757
             IV  APV ELT                VPDS NSQPY+LT++G+IGFAAV D+I E  F
Sbjct: 194  SIVTYAPVPELTTIIILASAVLAIAEATVPDSVNSQPYLLTVSGLIGFAAVKDFISEPFF 253

Query: 756  WLLLMGLFSFSWFFKKKDVVTSTLPVAAALSAVGQPWLRVVVMTSYVALAISYHSKKLSE 577
            W LL+GLF+F+   KK+D V+S LPVAA L+AVGQPWLRVVV+ SY ALAIS+HSKK+S+
Sbjct: 254  WTLLVGLFAFAQLVKKRDYVSSALPVAAVLAAVGQPWLRVVVIASYTALAISHHSKKISD 313

Query: 576  GKSEVEATVTVRKXXXXXXXXXXAIGIHVAAKWIRYRHLTWMIV 445
            GK E E   T R+          AIGIH+AAKW  YRHLTWMIV
Sbjct: 314  GKEEGEVAATSRRLPVPLLCVSLAIGIHLAAKWAGYRHLTWMIV 357


>ref|XP_002319380.1| predicted protein [Populus trichocarpa] gi|222857756|gb|EEE95303.1|
            predicted protein [Populus trichocarpa]
          Length = 349

 Score =  331 bits (848), Expect = 4e-88
 Identities = 178/350 (50%), Positives = 227/350 (64%), Gaps = 21/350 (6%)
 Frame = -2

Query: 1431 PLHSLSQKPIYSLRRLPSYPTITTQSSKANTFLGLSL--------------KTHGFLLN- 1297
            P+ +LS   +    ++PS+  ++ Q+ K+ T    SL              K  G  L+ 
Sbjct: 4    PITTLSSPTL----KIPSFSRLSLQTHKSQTISCHSLAIKARPLCSHNQPLKRFGLFLDS 59

Query: 1296 --KKMGFVCKSENGEGGERKKEV--DESRGESTMPERFRYLTKEAPDRPVRWPWLVALAF 1129
              +K+GF   +ENGEG   +  V  D  RGESTMPERFRYLTKEAPD PVRWPW VAL F
Sbjct: 60   RDRKLGFRVNAENGEGESERDGVFDDGERGESTMPERFRYLTKEAPDPPVRWPWFVALGF 119

Query: 1128 GIYAWRTVLWELSNWKKAALAIAGFMGYLSKFALAFVFYFIGTPVTSLIRFVETVFYSIR 949
             IYAWR VL+EL NWK+  +AI GF+GYL K  LA VF+FIG P+TSLIR +ET  Y+ +
Sbjct: 120  LIYAWRAVLFELGNWKRGVIAIIGFVGYLLKLLLAVVFHFIGDPITSLIRCIETAIYTFQ 179

Query: 948  GIYSDIVAAAPVQELTXXXXXXXXXXXXXXXXVPDSANSQPYMLTLAGIIGFAAVMDYIP 769
              YS IV +APV ELT                 P+S + QPY+LT++G+IG+AAV +YI 
Sbjct: 180  AFYSGIVRSAPVPELTLIIMLASAVLAIGEAAAPNSVSRQPYLLTVSGLIGYAAVRNYIS 239

Query: 768  ELVFWLLLMGLFSFSWFFKKKDVVTSTLPVAAALSAVGQPWLRVVVMTSYVALAISYHSK 589
            E +FW LL+GL++FS F KK+D VTS LP AA L+A+G+PW+RV+VM SY+ALAISYHSK
Sbjct: 240  EPLFWTLLLGLYAFSRFIKKRDDVTSALPAAAVLAAIGEPWVRVLVMVSYLALAISYHSK 299

Query: 588  KLSEGKSEVEATV--TVRKXXXXXXXXXXAIGIHVAAKWIRYRHLTWMIV 445
            +L++GK EVE     T  +          AIGIHVAAKW  YRHLTWM+V
Sbjct: 300  QLAKGKEEVEVVTADTGSRVPVPLLCAALAIGIHVAAKWAGYRHLTWMLV 349


>emb|CBI28387.3| unnamed protein product [Vitis vinifera]
          Length = 255

 Score =  323 bits (827), Expect = 1e-85
 Identities = 161/255 (63%), Positives = 187/255 (73%)
 Frame = -2

Query: 1209 MPERFRYLTKEAPDRPVRWPWLVALAFGIYAWRTVLWELSNWKKAALAIAGFMGYLSKFA 1030
            MPERFR+LTKEAPD P+RWPW +AL F +YAWRTVLWELSNW+KAALA+  F GYL K A
Sbjct: 1    MPERFRHLTKEAPDPPLRWPWYIALVFLVYAWRTVLWELSNWRKAALAVVYFAGYLLKLA 60

Query: 1029 LAFVFYFIGTPVTSLIRFVETVFYSIRGIYSDIVAAAPVQELTXXXXXXXXXXXXXXXXV 850
            LA +F+FIG PVTSLIR VET  Y+IR  YS IV  APV ELT                V
Sbjct: 61   LALIFHFIGNPVTSLIRCVETALYTIRAFYSSIVTYAPVPELTTIIILASAVLAIAEATV 120

Query: 849  PDSANSQPYMLTLAGIIGFAAVMDYIPELVFWLLLMGLFSFSWFFKKKDVVTSTLPVAAA 670
            PDS NSQPY+LT++G+IGFAAV D+I E  FW LL+GLF+F+   KK+D V+S LPVAA 
Sbjct: 121  PDSVNSQPYLLTVSGLIGFAAVKDFISEPFFWTLLVGLFAFAQLVKKRDYVSSALPVAAV 180

Query: 669  LSAVGQPWLRVVVMTSYVALAISYHSKKLSEGKSEVEATVTVRKXXXXXXXXXXAIGIHV 490
            L+AVGQPWLRVVV+ SY ALAIS+HSKK+S+GK E E   T R+          AIGIH+
Sbjct: 181  LAAVGQPWLRVVVIASYTALAISHHSKKISDGKEEGEVAATSRRLPVPLLCVSLAIGIHL 240

Query: 489  AAKWIRYRHLTWMIV 445
            AAKW  YRHLTWMIV
Sbjct: 241  AAKWAGYRHLTWMIV 255


>ref|XP_002517989.1| conserved hypothetical protein [Ricinus communis]
            gi|223542971|gb|EEF44507.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 350

 Score =  317 bits (812), Expect = 5e-84
 Identities = 172/351 (49%), Positives = 222/351 (63%), Gaps = 22/351 (6%)
 Frame = -2

Query: 1431 PLHSLSQKPIYSLRRLPSYPTITTQSSKA---------NTFLGLSLKTHG------FLLN 1297
            P+ +LS     S  ++PS+ ++T ++ K           T L  S  TH       +  N
Sbjct: 4    PIATLSSSS--STFKIPSFSSLTLRNHKQPISPFSLPIQTQLSNSKFTHERFGLFVYSNN 61

Query: 1296 KKMGFVCKSENGEGGERKKEVDES-------RGESTMPERFRYLTKEAPDRPVRWPWLVA 1138
            K +G    +  G+G      VD++       RGESTMPERFRYLTKEAPD PVRWPW +A
Sbjct: 62   KNLGLCLNA--GKGERSNSVVDDNDDAEILARGESTMPERFRYLTKEAPDPPVRWPWFIA 119

Query: 1137 LAFGIYAWRTVLWELSNWKKAALAIAGFMGYLSKFALAFVFYFIGTPVTSLIRFVETVFY 958
            L F +YAWR VL+EL+NWK  ALA+  F+ YL K  LA +F+FIG PVTSLIRF+ET+ Y
Sbjct: 120  LGFLVYAWRAVLFELANWKNGALAVVSFVSYLLKLLLAVIFHFIGDPVTSLIRFLETLIY 179

Query: 957  SIRGIYSDIVAAAPVQELTXXXXXXXXXXXXXXXXVPDSANSQPYMLTLAGIIGFAAVMD 778
             +R  YS IV+ APV ELT                 P+S  SQPY+LT++G+IG+AAV +
Sbjct: 180  MVRAYYSGIVSYAPVPELTTIIVLSSAVLAIAEAAAPNSITSQPYLLTISGLIGYAAVRN 239

Query: 777  YIPELVFWLLLMGLFSFSWFFKKKDVVTSTLPVAAALSAVGQPWLRVVVMTSYVALAISY 598
            YI E +FW LL+GL+ FS  FK++D VTS LP AA L+A+G+PW+RV+VM +Y+ALAIS+
Sbjct: 240  YISEPLFWTLLLGLYGFSLLFKRRDHVTSALPSAAVLAAIGEPWVRVLVMFAYLALAISH 299

Query: 597  HSKKLSEGKSEVEATVTVRKXXXXXXXXXXAIGIHVAAKWIRYRHLTWMIV 445
            HS+KL EGK EV    T RK          AIGI +AAKW  YRHLTWM+V
Sbjct: 300  HSRKLIEGKEEVNVVATGRKVPVPLFCAALAIGIRLAAKWAGYRHLTWMVV 350


>ref|XP_002869515.1| EMB1923 [Arabidopsis lyrata subsp. lyrata]
            gi|297315351|gb|EFH45774.1| EMB1923 [Arabidopsis lyrata
            subsp. lyrata]
          Length = 348

 Score =  288 bits (737), Expect = 3e-75
 Identities = 147/279 (52%), Positives = 187/279 (67%), Gaps = 1/279 (0%)
 Frame = -2

Query: 1278 CKSENGEGGERKKEVDE-SRGESTMPERFRYLTKEAPDRPVRWPWLVALAFGIYAWRTVL 1102
            C+ EN   G  + E +  +R ESTMP+RFRYLTKEAPD P+ WPW VAL F +YAWR VL
Sbjct: 74   CEKENAPNGGIEDEAERFARRESTMPDRFRYLTKEAPDSPIIWPWFVALGFLVYAWRAVL 133

Query: 1101 WELSNWKKAALAIAGFMGYLSKFALAFVFYFIGTPVTSLIRFVETVFYSIRGIYSDIVAA 922
            +ELSNW+KAA AI GF+G LSKFALA VF+FIG P+TSLI  +ET  YS+R  YS IVA 
Sbjct: 134  FELSNWRKAAFAILGFVGDLSKFALALVFHFIGDPITSLISLLETAMYSVRAFYSGIVAY 193

Query: 921  APVQELTXXXXXXXXXXXXXXXXVPDSANSQPYMLTLAGIIGFAAVMDYIPELVFWLLLM 742
             PV+ELT                 P+S + QPY++T+AG++G+AAV  YI E  FW +L+
Sbjct: 194  TPVRELTTVILLASSVLAIGEAVEPNSISKQPYVVTIAGLVGYAAVQSYISEPFFWTVLL 253

Query: 741  GLFSFSWFFKKKDVVTSTLPVAAALSAVGQPWLRVVVMTSYVALAISYHSKKLSEGKSEV 562
            GL+ +S   KK+D VTS LP AA L+ VG+PW+RVV +T Y+ALA+ ++S K SE +S+ 
Sbjct: 254  GLYGYSRLIKKRDDVTSALPSAAVLAGVGEPWVRVVAITGYLALAMYHNSSKTSEEESQ- 312

Query: 561  EATVTVRKXXXXXXXXXXAIGIHVAAKWIRYRHLTWMIV 445
                  R           AIG+ +AAKW  YRHLTWMIV
Sbjct: 313  ---SLRRAPPMPLLAAALAIGVRLAAKWAGYRHLTWMIV 348


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