BLASTX nr result

ID: Coptis23_contig00017123 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00017123
         (399 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002530015.1| pattern formation protein, putative [Ricinus...    55   5e-06
emb|CBI33851.3| unnamed protein product [Vitis vinifera]               55   6e-06
ref|XP_002279665.1| PREDICTED: pattern formation protein EMB30-l...    55   6e-06
emb|CAN61434.1| hypothetical protein VITISV_034390 [Vitis vinifera]    55   6e-06

>ref|XP_002530015.1| pattern formation protein, putative [Ricinus communis]
           gi|223530494|gb|EEF32377.1| pattern formation protein,
           putative [Ricinus communis]
          Length = 1450

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 29/46 (63%), Positives = 33/46 (71%)
 Frame = +2

Query: 260 MGRLKLQSDINSIXXXXXXXXHTSSRGALACMVNSEIGAVLAVMRR 397
           MG L LQS+INS           S++GA+ACMVNSEIGAVLAVMRR
Sbjct: 1   MGHLNLQSEINSFQREFCDCPVISTKGAVACMVNSEIGAVLAVMRR 46


>emb|CBI33851.3| unnamed protein product [Vitis vinifera]
          Length = 1264

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 31/47 (65%), Positives = 34/47 (72%), Gaps = 1/47 (2%)
 Frame = +2

Query: 260 MGRLKLQSDINSIXXXXXXXXHTSS-RGALACMVNSEIGAVLAVMRR 397
           MGRLKLQS I SI         TSS + ALACM+NSE+GAVLAVMRR
Sbjct: 1   MGRLKLQSGIKSIEEEPEDCESTSSNKAALACMINSEVGAVLAVMRR 47


>ref|XP_002279665.1| PREDICTED: pattern formation protein EMB30-like [Vitis vinifera]
          Length = 1470

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 31/47 (65%), Positives = 34/47 (72%), Gaps = 1/47 (2%)
 Frame = +2

Query: 260 MGRLKLQSDINSIXXXXXXXXHTSS-RGALACMVNSEIGAVLAVMRR 397
           MGRLKLQS I SI         TSS + ALACM+NSE+GAVLAVMRR
Sbjct: 1   MGRLKLQSGIKSIEEEPEDCESTSSNKAALACMINSEVGAVLAVMRR 47


>emb|CAN61434.1| hypothetical protein VITISV_034390 [Vitis vinifera]
          Length = 1433

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 31/47 (65%), Positives = 34/47 (72%), Gaps = 1/47 (2%)
 Frame = +2

Query: 260 MGRLKLQSDINSIXXXXXXXXHTSS-RGALACMVNSEIGAVLAVMRR 397
           MGRLKLQS I SI         TSS + ALACM+NSE+GAVLAVMRR
Sbjct: 1   MGRLKLQSGIKSIEEEPEDCESTSSNKAALACMINSEVGAVLAVMRR 47


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