BLASTX nr result

ID: Coptis23_contig00017105 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00017105
         (1595 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276676.1| PREDICTED: solute carrier family 25 member 4...   502   e-139
ref|XP_002521354.1| Mitochondrial carrier protein RIM2, putative...   475   e-131
ref|XP_004141810.1| PREDICTED: solute carrier family 25 member 4...   467   e-129
ref|XP_002324186.1| predicted protein [Populus trichocarpa] gi|1...   459   e-126
ref|XP_002516110.1| protein with unknown function [Ricinus commu...   457   e-126

>ref|XP_002276676.1| PREDICTED: solute carrier family 25 member 44-like isoform 1 [Vitis
            vinifera] gi|359482721|ref|XP_003632815.1| PREDICTED:
            solute carrier family 25 member 44-like [Vitis vinifera]
          Length = 358

 Score =  502 bits (1292), Expect = e-139
 Identities = 261/364 (71%), Positives = 283/364 (77%), Gaps = 15/364 (4%)
 Frame = +1

Query: 361  MSLNAAEEDSAQEIHLPADIDWKMLDKSKFFFLGAALFSGVSATLYPVVVLKTRQQISQT 540
            MSL+AAEEDSAQEIHLPADIDW+MLDKSKFFFLGAALFSGVSATLYPVVVLKTRQQI+Q+
Sbjct: 1    MSLSAAEEDSAQEIHLPADIDWEMLDKSKFFFLGAALFSGVSATLYPVVVLKTRQQIAQS 60

Query: 541  QVSSVKTAVSIVQHEGIRGLYRGFGTSLMGTIPARALYMTALEVTKSNVGIATVQLGFPE 720
            QVSS++TA SIV+HEG R LYRGFGTSLMGTIPARALYMTALEVTKSNVG ATV+LGFPE
Sbjct: 61   QVSSIRTAFSIVRHEGFRALYRGFGTSLMGTIPARALYMTALEVTKSNVGTATVRLGFPE 120

Query: 721  PTXXXXXXXXXXXXXXXXXQLVWTPVDVVSQRLMVQGGHNF---------------NSSS 855
            PT                 QLVWTP+DVVSQRLMVQGG                  N+SS
Sbjct: 121  PTAAAIANAAAGLSAAMAAQLVWTPIDVVSQRLMVQGGGGGGGGGGCGPGEKLKIPNASS 180

Query: 856  CKYRGGIDAFQKILKSDGLRGLYRGFGMSILTYAPSNAVWWASYSVTQRLVWGGFSCYFR 1035
            CKY GGIDAF+KIL +DG RGLYRGFG+SILTYAPSNAVWWASYSV QRL+W G   Y  
Sbjct: 181  CKYLGGIDAFRKILNTDGPRGLYRGFGISILTYAPSNAVWWASYSVAQRLIWSGIGVYL- 239

Query: 1036 RKDNYCKDESCTSNGNGYSFRPDTKTVVAVQGLSAAMAGGISALITMPLDTIKTRLQVLD 1215
                 CK +  T      +FRPD+KTV+AVQG+SAAMAGG+SALITMPLDTIKTRLQVLD
Sbjct: 240  -----CKKDDETGENGVSTFRPDSKTVMAVQGVSAAMAGGVSALITMPLDTIKTRLQVLD 294

Query: 1216 GDDNGRRPPTIGQTVRNLVREGGWAACYRGLGPRWXXXXXXXXXXXXXYELLKRLSTKNQ 1395
            G++NGRR PTIGQTVRNLVREGGW ACYRGLGPRW             YE LKRLS KNQ
Sbjct: 295  GEENGRRGPTIGQTVRNLVREGGWMACYRGLGPRWASMSMSATTMITTYEFLKRLSAKNQ 354

Query: 1396 EHLT 1407
            E LT
Sbjct: 355  EALT 358


>ref|XP_002521354.1| Mitochondrial carrier protein RIM2, putative [Ricinus communis]
            gi|223539432|gb|EEF41022.1| Mitochondrial carrier protein
            RIM2, putative [Ricinus communis]
          Length = 343

 Score =  475 bits (1222), Expect = e-131
 Identities = 243/348 (69%), Positives = 277/348 (79%)
 Frame = +1

Query: 361  MSLNAAEEDSAQEIHLPADIDWKMLDKSKFFFLGAALFSGVSATLYPVVVLKTRQQISQT 540
            M+L+AAE++S +EIH+PA+IDW+MLDKSKFFFLGAALFSGVSATLYP+VVLKTRQQ++Q+
Sbjct: 1    MNLSAAEDESEKEIHIPAEIDWEMLDKSKFFFLGAALFSGVSATLYPIVVLKTRQQVAQS 60

Query: 541  QVSSVKTAVSIVQHEGIRGLYRGFGTSLMGTIPARALYMTALEVTKSNVGIATVQLGFPE 720
            QVS +KT   +V+ EG R LYRGFGTSLMGTIPARALYM ALEVTKSNVG ATV LGF E
Sbjct: 61   QVSCIKTGFGMVRLEGFRALYRGFGTSLMGTIPARALYMGALEVTKSNVGTATVGLGFTE 120

Query: 721  PTXXXXXXXXXXXXXXXXXQLVWTPVDVVSQRLMVQGGHNFNSSSCKYRGGIDAFQKILK 900
             T                 QLVWTP+DVVSQRLMVQG  N  S++CKY  GIDAF+KI+ 
Sbjct: 121  ATAATTANAVAGLSAALAAQLVWTPIDVVSQRLMVQGAGN-ASTTCKYSNGIDAFRKIIT 179

Query: 901  SDGLRGLYRGFGMSILTYAPSNAVWWASYSVTQRLVWGGFSCYFRRKDNYCKDESCTSNG 1080
            SDGLRGLYRGFG+SILTYAPSNAVWWASYSV QR+VWGG  CYF +K    +D     + 
Sbjct: 180  SDGLRGLYRGFGISILTYAPSNAVWWASYSVAQRMVWGGVGCYFSKKH---QDGVNVDSN 236

Query: 1081 NGYSFRPDTKTVVAVQGLSAAMAGGISALITMPLDTIKTRLQVLDGDDNGRRPPTIGQTV 1260
            N  + +PD+KTV+AVQG+SAAMAGG+SALITMPLDTIKTR+QVLDG++NGRR PTIGQTV
Sbjct: 237  N--TLKPDSKTVMAVQGVSAAMAGGVSALITMPLDTIKTRMQVLDGEENGRRGPTIGQTV 294

Query: 1261 RNLVREGGWAACYRGLGPRWXXXXXXXXXXXXXYELLKRLSTKNQEHL 1404
            RNLVREGGW ACYRGLGPRW             YE LKRLSTKNQE L
Sbjct: 295  RNLVREGGWMACYRGLGPRWASMSMSATTMITTYEFLKRLSTKNQEVL 342


>ref|XP_004141810.1| PREDICTED: solute carrier family 25 member 44-like [Cucumis sativus]
            gi|449480693|ref|XP_004155969.1| PREDICTED: solute
            carrier family 25 member 44-like [Cucumis sativus]
          Length = 351

 Score =  467 bits (1202), Expect = e-129
 Identities = 239/350 (68%), Positives = 273/350 (78%), Gaps = 1/350 (0%)
 Frame = +1

Query: 361  MSLNAAEEDSAQEIHLPADIDWKMLDKSKFFFLGAALFSGVSATLYPVVVLKTRQQISQT 540
            M+L AAEE+S QEIH+PA+IDW+MLDKSKFFFLGAALFSGVSA+LYP+VVLKTRQQ+S +
Sbjct: 1    MNLGAAEEESPQEIHIPAEIDWQMLDKSKFFFLGAALFSGVSASLYPMVVLKTRQQVSHS 60

Query: 541  QVSSVKTAVSIVQHEGIRGLYRGFGTSLMGTIPARALYMTALEVTKSNVGIATVQLGFPE 720
            Q+S ++TA S+V+HEG R LYRGFGTSLMGTIPARALYM ALE+TKS VG AT+++GFPE
Sbjct: 61   QLSCIRTAFSLVRHEGFRALYRGFGTSLMGTIPARALYMGALEITKSYVGTATIRVGFPE 120

Query: 721  PTXXXXXXXXXXXXXXXXXQLVWTPVDVVSQRLMVQGGHNF-NSSSCKYRGGIDAFQKIL 897
             +                 QLVWTPVDVVSQRLMVQ  +N  NSSS  Y  GIDAF+KIL
Sbjct: 121  TSAATIANAAAGLSAAMAAQLVWTPVDVVSQRLMVQPRYNNPNSSSTHYINGIDAFRKIL 180

Query: 898  KSDGLRGLYRGFGMSILTYAPSNAVWWASYSVTQRLVWGGFSCYFRRKDNYCKDESCTSN 1077
            K+DGLRGLYRGFG+SILTYAPSNAVWWASY V QRLVWGG  C +  K     +++    
Sbjct: 181  KADGLRGLYRGFGISILTYAPSNAVWWASYYVAQRLVWGGIGCCYHAKKVQVDEDNENGG 240

Query: 1078 GNGYSFRPDTKTVVAVQGLSAAMAGGISALITMPLDTIKTRLQVLDGDDNGRRPPTIGQT 1257
             +   ++PD+KTV+AVQG SAAMAG ISALITMPLDTIKTRLQVLDGD+NGRR PTIGQT
Sbjct: 241  YSNNVYKPDSKTVIAVQGASAAMAGSISALITMPLDTIKTRLQVLDGDENGRRGPTIGQT 300

Query: 1258 VRNLVREGGWAACYRGLGPRWXXXXXXXXXXXXXYELLKRLSTKNQEHLT 1407
            +RNLVREGGW ACYRGL PR              YE LKRLSTKNQE LT
Sbjct: 301  LRNLVREGGWTACYRGLAPRCASMSMSATTMITTYEFLKRLSTKNQESLT 350


>ref|XP_002324186.1| predicted protein [Populus trichocarpa] gi|118489115|gb|ABK96364.1|
            unknown [Populus trichocarpa x Populus deltoides]
            gi|222865620|gb|EEF02751.1| predicted protein [Populus
            trichocarpa]
          Length = 356

 Score =  459 bits (1180), Expect = e-126
 Identities = 238/360 (66%), Positives = 274/360 (76%), Gaps = 11/360 (3%)
 Frame = +1

Query: 361  MSLNAAEEDSAQEIHLPADIDWKMLDKSKFFFLGAALFSGVSATLYPVVVLKTRQQISQT 540
            MSL+AAE++SA EIHLPADIDW MLDKSKFFFLGAALFSGVSA LYPVVVLKTRQQ+  T
Sbjct: 1    MSLSAAEDNSASEIHLPADIDWHMLDKSKFFFLGAALFSGVSAALYPVVVLKTRQQVLPT 60

Query: 541  QVSSVKTAVSIVQHEGIRGLYRGFGTSLMGTIPARALYMTALEVTKSNVGIATVQLGFPE 720
            Q+SS+K ++SI+ HEG+RG YRGFGTSLMGTIPARALYMTALEVTKSNVG ATV+LGF +
Sbjct: 61   QISSLKLSLSIMNHEGVRGFYRGFGTSLMGTIPARALYMTALEVTKSNVGTATVRLGFSD 120

Query: 721  PTXXXXXXXXXXXXXXXXXQLVWTPVDVVSQRLMVQGGHNF----------NSSSCKYRG 870
             T                 Q+VWTP+DVVSQRLMVQ  +            +SSSC+Y  
Sbjct: 121  TTATAIANAAAGLSSAMAAQVVWTPIDVVSQRLMVQDCNGSSIKSSKNMIPSSSSCRYMN 180

Query: 871  GIDAFQKILKSDGLRGLYRGFGMSILTYAPSNAVWWASYSVTQRLVWGGFSCYFRRKDNY 1050
            GIDAF+KIL +DG RGLYRGFG+SILTYAPSNAVWWASYSV  RLVWGG  CY  +    
Sbjct: 181  GIDAFRKILNADGPRGLYRGFGISILTYAPSNAVWWASYSVAHRLVWGGIGCYASK---- 236

Query: 1051 CKDESCTSNGNGYSFRPDTKTVVAVQGLSAAMAGGISALITMPLDTIKTRLQVLDGDDNG 1230
             KDE+  + G G  +RP +K +VAVQG+ AAMA G+SA+ITMPLDTIKTRLQVLD ++NG
Sbjct: 237  -KDENAVNGGGGCGYRPGSKEMVAVQGVCAAMASGVSAMITMPLDTIKTRLQVLDREENG 295

Query: 1231 R-RPPTIGQTVRNLVREGGWAACYRGLGPRWXXXXXXXXXXXXXYELLKRLSTKNQEHLT 1407
            R RP T+ QTVRNLV+EGG+AACYRGLGPRW             YE LKRLSTKN++ LT
Sbjct: 296  RTRPLTVMQTVRNLVKEGGFAACYRGLGPRWVSMSMSATTMITTYEFLKRLSTKNRDSLT 355


>ref|XP_002516110.1| protein with unknown function [Ricinus communis]
            gi|223544596|gb|EEF46112.1| protein with unknown function
            [Ricinus communis]
          Length = 353

 Score =  457 bits (1175), Expect = e-126
 Identities = 239/360 (66%), Positives = 272/360 (75%), Gaps = 11/360 (3%)
 Frame = +1

Query: 361  MSLNAAEEDSAQEIHLPADIDWKMLDKSKFFFLGAALFSGVSATLYPVVVLKTRQQISQT 540
            MSL AAE+DSA EIH+PA+IDW MLDKSKFFFLGAALFSGVSA LYPVVVLKTRQQ+S T
Sbjct: 1    MSLGAAEDDSASEIHIPAEIDWHMLDKSKFFFLGAALFSGVSAALYPVVVLKTRQQVSPT 60

Query: 541  QVSSVKTAVSIVQHEGIRGLYRGFGTSLMGTIPARALYMTALEVTKSNVGIATVQLGFPE 720
            Q+ ++K + SI++HEGIRG YRGFGTSLMGTIPARALYMTALEVTKS+VG ATV+LGF +
Sbjct: 61   QIPTLKLSYSIMRHEGIRGFYRGFGTSLMGTIPARALYMTALEVTKSSVGTATVRLGFSD 120

Query: 721  PTXXXXXXXXXXXXXXXXXQLVWTPVDVVSQRLMVQGGHNFNS----------SSCKYRG 870
             T                 QLVWTP+DVVSQRLMVQG    NS           S +YR 
Sbjct: 121  TTATAIANAAAGLSSAMAAQLVWTPIDVVSQRLMVQGCSYSNSKSSSNVIPNLDSSRYRN 180

Query: 871  GIDAFQKILKSDGLRGLYRGFGMSILTYAPSNAVWWASYSVTQRLVWGGFSCYFRRKDNY 1050
            GIDAF+KIL +DG RGLYRGFG+SILTYAPSNAVWWASYSV  RLVWGG +CY  +    
Sbjct: 181  GIDAFRKILYADGPRGLYRGFGISILTYAPSNAVWWASYSVAHRLVWGGIACYTNK---- 236

Query: 1051 CKDESCTSNGNGYSFRPDTKTVVAVQGLSAAMAGGISALITMPLDTIKTRLQVLDGDDNG 1230
             KDESC    NG  +RPD+K +VAVQGL AAMA G+SA+ITMPLDT+KTR+QVLDG+ NG
Sbjct: 237  -KDESCV---NGCGYRPDSKAMVAVQGLCAAMASGVSAMITMPLDTVKTRMQVLDGEQNG 292

Query: 1231 RRPP-TIGQTVRNLVREGGWAACYRGLGPRWXXXXXXXXXXXXXYELLKRLSTKNQEHLT 1407
            RR P T+ QTV+NLV+EGG+AACYRGLGPRW             YE LKRLSTK+ E  T
Sbjct: 293  RRQPLTVMQTVKNLVKEGGFAACYRGLGPRWVSMSMSATTMITTYEFLKRLSTKSSESST 352


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