BLASTX nr result
ID: Coptis23_contig00017098
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis23_contig00017098
(1259 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002264958.1| PREDICTED: protein EI24 homolog [Vitis vinif... 426 e-117
ref|XP_002328769.1| predicted protein [Populus trichocarpa] gi|2... 418 e-114
gb|AFK33643.1| unknown [Medicago truncatula] 369 e-100
ref|XP_003592957.1| Etoposide-induced protein 2.4-like protein [... 369 e-100
ref|XP_003548664.1| PREDICTED: protein EI24 homolog [Glycine max] 364 3e-98
>ref|XP_002264958.1| PREDICTED: protein EI24 homolog [Vitis vinifera]
gi|297739548|emb|CBI29730.3| unnamed protein product
[Vitis vinifera]
Length = 330
Score = 426 bits (1096), Expect = e-117
Identities = 210/317 (66%), Positives = 241/317 (76%), Gaps = 4/317 (1%)
Frame = +2
Query: 50 MDTLRTKAKQAIALWFLGFREACCLHRVVLFCLRSKQLSKRTGQSFLFNGFIFLGSIFVF 229
M LR+K QA+ LWF GFREACCLHRV + C RS++L RTGQ FL NG IFLGSIFV
Sbjct: 1 MGVLRSKLGQALLLWFEGFREACCLHRVFILCHRSRKLLIRTGQCFLLNGLIFLGSIFVL 60
Query: 230 NSVVIPTLQWILPYQCQQFGSQDPCSIGRVEKLYSFLHHGLIQLFYIFWFYPLYXXXXXX 409
SVVIPTLQWILP C Q G Q+PC G + K YSFL HGLIQLFY+ WFYPLY
Sbjct: 61 KSVVIPTLQWILPDHCSQLGFQEPCPFGGILKFYSFLRHGLIQLFYVLWFYPLYVFSLIL 120
Query: 410 XXMWYNDIAKYAYVAMGRDGP-VADAHNQKDLSKSQNSAHVDKPAXXXXXXXXXXELVYS 586
+WYND+AKY + AMGR P V + +QKD QN A++DK A E VYS
Sbjct: 121 SNIWYNDVAKYGFAAMGRHEPTVPEPSSQKDTL--QNPAYIDKHAGLGGIVIGIGEQVYS 178
Query: 587 ILLLTFFFVQISTAGYIPCIGKALNFLFLSWLYAYYSFEYKWNLDELGIDKRLDFFESNW 766
+LLL+FFF+++ G+IP IGKALNFL LSW+YAYY FEYKWN ELG+DKRLDFFESNW
Sbjct: 179 VLLLSFFFLEVYATGFIPYIGKALNFLLLSWMYAYYCFEYKWNFSELGLDKRLDFFESNW 238
Query: 767 AFFAGFGSPCVLAIFFFSPLVSYGVMAVLFPLFVLTATGSKAEQILDSQRR---GERLGR 937
AFFAGFG+PCVLAIFFFSPLVSYGVMA+LFPLFVLTATGS+AEQ++DS+RR G LGR
Sbjct: 239 AFFAGFGNPCVLAIFFFSPLVSYGVMAILFPLFVLTATGSEAEQVIDSRRRKWKGAGLGR 298
Query: 938 LPIFYIADTLSMRVLSI 988
LPIFY ADTLS+ VLS+
Sbjct: 299 LPIFYAADTLSLWVLSL 315
>ref|XP_002328769.1| predicted protein [Populus trichocarpa] gi|222839067|gb|EEE77418.1|
predicted protein [Populus trichocarpa]
Length = 339
Score = 418 bits (1074), Expect = e-114
Identities = 208/326 (63%), Positives = 241/326 (73%), Gaps = 4/326 (1%)
Frame = +2
Query: 59 LRTKAKQAIALWFLGFREACCLHRVVLFCLRSKQLSKRTGQSFLFNGFIFLGSIFVFNSV 238
LR K KQ + LW GFREACCLHRVV C RS+ L RTGQ FL NGFIFLGSI V SV
Sbjct: 11 LRPKLKQGLLLWLEGFREACCLHRVVFLCSRSRMLLVRTGQCFLLNGFIFLGSILVLKSV 70
Query: 239 VIPTLQWILPYQCQQFGSQDPCSIGRVEKLYSFLHHGLIQLFYIFWFYPLYXXXXXXXXM 418
VIPTL WILP QC + SQ PCS V KLYS L GL+QLFY+FWFYPLY +
Sbjct: 71 VIPTLLWILPNQCSEVSSQGPCSFDSVSKLYSSLRLGLVQLFYVFWFYPLYIFSFILSTI 130
Query: 419 WYNDIAKYAYVAMGRDG-PVADAHNQKDLSKSQNSAHVDKPAXXXXXXXXXXELVYSILL 595
WYNDIAKY + AMG++G + + +Q ++ ++N+A DKPA E VYSILL
Sbjct: 131 WYNDIAKYGFAAMGKNGHDILEPSSQNEVKTTENTALKDKPAGLGGVMIGIGEQVYSILL 190
Query: 596 LTFFFVQISTAGYIPCIGKALNFLFLSWLYAYYSFEYKWNLDELGIDKRLDFFESNWAFF 775
LTFFF+++ G+IP IGKALNF+ LSW+YAYY FEYKWNL E+ +D+RLDFFESNWAFF
Sbjct: 191 LTFFFLEVYATGFIPHIGKALNFVLLSWMYAYYCFEYKWNLSEVALDRRLDFFESNWAFF 250
Query: 776 AGFGSPCVLAIFFFSPLVSYGVMAVLFPLFVLTATGSKAEQILDSQRR---GERLGRLPI 946
AGFGSPCVLAIFFFSPLVSYGVMA+LFPLFVL ATGS AEQ++ SQRR G LGRLPI
Sbjct: 251 AGFGSPCVLAIFFFSPLVSYGVMAILFPLFVLAATGSGAEQLIFSQRRKWKGVGLGRLPI 310
Query: 947 FYIADTLSMRVLSIFMETPPVQKKDK 1024
FY ADTLSMRVLS+ P+ +D+
Sbjct: 311 FYAADTLSMRVLSLL----PLDTRDQ 332
>gb|AFK33643.1| unknown [Medicago truncatula]
Length = 332
Score = 369 bits (947), Expect = e-100
Identities = 184/323 (56%), Positives = 222/323 (68%), Gaps = 4/323 (1%)
Frame = +2
Query: 68 KAKQAIALWFLGFREACCLHRVVLFCLRSKQLSKRTGQSFLFNGFIFLGSIFVFNSVVIP 247
+ K LW G REACCLHRV++ CLRSK L RTGQ FL NGFIFLGSIFV NSVVIP
Sbjct: 7 RLKSGGILWLEGLREACCLHRVIILCLRSKPLMLRTGQCFLLNGFIFLGSIFVLNSVVIP 66
Query: 248 TLQWILPYQCQQFGSQDPCSIGRVEKLYSFLHHGLIQLFYIFWFYPLYXXXXXXXXMWYN 427
L WILP QC Q S C++ K YSFL LIQLFY WFYPLY +WYN
Sbjct: 67 ALWWILPDQCSQLVSHKLCALAGTLKFYSFLRLVLIQLFYALWFYPLYVFSIVLSTLWYN 126
Query: 428 DIAKYAYVAMGRDGPVAD-AHNQKDLSKSQNSAHVDKPAXXXXXXXXXXELVYSILLLTF 604
DIAKY Y AMGR D + Q + QN+ +P+ E VYSILLL+
Sbjct: 127 DIAKYGYAAMGRSKFTVDNSSGQNNTVTMQNAYQAKRPSGLGGVMIGIGEQVYSILLLSV 186
Query: 605 FFVQISTAGYIPCIGKALNFLFLSWLYAYYSFEYKWNLDELGIDKRLDFFESNWAFFAGF 784
FF+++ G+IP IGK LNFL LSW+YAYY FEYKWN +E+ +D+RLD+FES W FFAGF
Sbjct: 187 FFLEVYATGFIPYIGKVLNFLLLSWMYAYYCFEYKWNFNEVALDRRLDYFESYWPFFAGF 246
Query: 785 GSPCVLAIFFFSPLVSYGVMAVLFPLFVLTATGSKAEQILDSQR---RGERLGRLPIFYI 955
GSPCVLAIFFFSPLVSYG+MA+L+PLFVLTATGS+AEQ + ++ R + RLPIFY+
Sbjct: 247 GSPCVLAIFFFSPLVSYGIMAILYPLFVLTATGSEAEQEISFEKNKWRAAGVERLPIFYV 306
Query: 956 ADTLSMRVLSIFMETPPVQKKDK 1024
AD +SM +LS+ P++K+D+
Sbjct: 307 ADNVSMWILSLL----PLEKRDR 325
>ref|XP_003592957.1| Etoposide-induced protein 2.4-like protein [Medicago truncatula]
gi|355482005|gb|AES63208.1| Etoposide-induced protein
2.4-like protein [Medicago truncatula]
Length = 328
Score = 369 bits (947), Expect = e-100
Identities = 184/323 (56%), Positives = 222/323 (68%), Gaps = 4/323 (1%)
Frame = +2
Query: 68 KAKQAIALWFLGFREACCLHRVVLFCLRSKQLSKRTGQSFLFNGFIFLGSIFVFNSVVIP 247
+ K LW G REACCLHRV++ CLRSK L RTGQ FL NGFIFLGSIFV NSVVIP
Sbjct: 3 RLKSGGILWLEGLREACCLHRVIILCLRSKPLMLRTGQCFLLNGFIFLGSIFVLNSVVIP 62
Query: 248 TLQWILPYQCQQFGSQDPCSIGRVEKLYSFLHHGLIQLFYIFWFYPLYXXXXXXXXMWYN 427
L WILP QC Q S C++ K YSFL LIQLFY WFYPLY +WYN
Sbjct: 63 ALWWILPDQCSQLVSHKLCALAGTLKFYSFLRLVLIQLFYALWFYPLYVFSIVLSTLWYN 122
Query: 428 DIAKYAYVAMGRDGPVAD-AHNQKDLSKSQNSAHVDKPAXXXXXXXXXXELVYSILLLTF 604
DIAKY Y AMGR D + Q + QN+ +P+ E VYSILLL+
Sbjct: 123 DIAKYGYAAMGRSKFTVDNSSGQNNTVTMQNAYQAKRPSGLGGVMIGIGEQVYSILLLSV 182
Query: 605 FFVQISTAGYIPCIGKALNFLFLSWLYAYYSFEYKWNLDELGIDKRLDFFESNWAFFAGF 784
FF+++ G+IP IGK LNFL LSW+YAYY FEYKWN +E+ +D+RLD+FES W FFAGF
Sbjct: 183 FFLEVYATGFIPYIGKVLNFLLLSWMYAYYCFEYKWNFNEVALDRRLDYFESYWPFFAGF 242
Query: 785 GSPCVLAIFFFSPLVSYGVMAVLFPLFVLTATGSKAEQILDSQR---RGERLGRLPIFYI 955
GSPCVLAIFFFSPLVSYG+MA+L+PLFVLTATGS+AEQ + ++ R + RLPIFY+
Sbjct: 243 GSPCVLAIFFFSPLVSYGIMAILYPLFVLTATGSEAEQEISFEKNKWRAAGVERLPIFYV 302
Query: 956 ADTLSMRVLSIFMETPPVQKKDK 1024
AD +SM +LS+ P++K+D+
Sbjct: 303 ADNVSMWILSLL----PLEKRDR 321
>ref|XP_003548664.1| PREDICTED: protein EI24 homolog [Glycine max]
Length = 331
Score = 364 bits (934), Expect = 3e-98
Identities = 184/324 (56%), Positives = 220/324 (67%), Gaps = 4/324 (1%)
Frame = +2
Query: 68 KAKQAIALWFLGFREACCLHRVVLFCLRSKQLSKRTGQSFLFNGFIFLGSIFVFNSVVIP 247
K K LW G EACCLHRVV+ C+RS L RTGQ FL NGFIFLGSIFV NSVVIP
Sbjct: 6 KVKVGGFLWLEGLVEACCLHRVVILCMRSNNLLMRTGQCFLLNGFIFLGSIFVLNSVVIP 65
Query: 248 TLQWILPYQCQQFGSQDPCSIGRVEKLYSFLHHGLIQLFYIFWFYPLYXXXXXXXXMWYN 427
L WILP Q QF S C +G K YSF+ LIQLFY+ WFYPLY +WYN
Sbjct: 66 ALWWILPDQSSQFVSHKLCDLGGTLKFYSFVRLALIQLFYVLWFYPLYVFSIVLSTIWYN 125
Query: 428 DIAKYAYVAMGRDG-PVADAHNQKDLSKSQNSAHVDKPAXXXXXXXXXXELVYSILLLTF 604
DIAKY Y AMGR V +Q + QN+ HV P+ + VYSILLL+
Sbjct: 126 DIAKYGYAAMGRSKFTVEKGSSQNNSPTLQNAHHVKGPSGLGGVMIGIGQQVYSILLLSV 185
Query: 605 FFVQISTAGYIPCIGKALNFLFLSWLYAYYSFEYKWNLDELGIDKRLDFFESNWAFFAGF 784
FF+++ G+IP IGK LNFL LSW+YAYY FEYKWN +E+ +D+RLD+FES W FFAGF
Sbjct: 186 FFLEVYATGFIPYIGKLLNFLLLSWMYAYYCFEYKWNFNEVALDRRLDYFESYWPFFAGF 245
Query: 785 GSPCVLAIFFFSPLVSYGVMAVLFPLFVLTATGSKAEQILDSQR---RGERLGRLPIFYI 955
GSPCVLAIFFFSPLVSYG+MA+LFPLFVLTATGS++EQ + ++ R + RLPIFY+
Sbjct: 246 GSPCVLAIFFFSPLVSYGIMAILFPLFVLTATGSESEQEISFEKHRWRAAGVERLPIFYV 305
Query: 956 ADTLSMRVLSIFMETPPVQKKDKK 1027
AD +SM +LS+ Q +D+K
Sbjct: 306 ADKVSMWMLSLLPMEKGDQVQDRK 329