BLASTX nr result

ID: Coptis23_contig00017095 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00017095
         (483 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275136.2| PREDICTED: uncharacterized protein LOC100249...    82   8e-26
ref|XP_004137615.1| PREDICTED: uncharacterized protein LOC101206...    84   1e-25
ref|XP_003525644.1| PREDICTED: uncharacterized protein LOC100801...    86   1e-23
ref|XP_003551257.1| PREDICTED: uncharacterized protein LOC100817...    74   2e-23
ref|XP_002317926.1| predicted protein [Populus trichocarpa] gi|2...    80   4e-23

>ref|XP_002275136.2| PREDICTED: uncharacterized protein LOC100249148 [Vitis vinifera]
          Length = 210

 Score = 82.0 bits (201), Expect(2) = 8e-26
 Identities = 43/65 (66%), Positives = 48/65 (73%)
 Frame = +3

Query: 72  RKILXXXXXXXXARTALQWALHNLLRFGDLIILLHVFPSTRSRNNNKQRSLRLKGFQLAL 251
           RKI+        ARTA +WALHNLLR+GDLI LLHVFP  RSR+  K R  RLKGFQLAL
Sbjct: 4   RKIVVVVEDVEAARTAFEWALHNLLRYGDLITLLHVFPK-RSRSKKKLRLSRLKGFQLAL 62

Query: 252 SFKDL 266
           SFKD+
Sbjct: 63  SFKDI 67



 Score = 60.1 bits (144), Expect(2) = 8e-26
 Identities = 26/46 (56%), Positives = 35/46 (76%)
 Frame = +2

Query: 344 CDEVPDAKVEIVVREGDQDGRTIASTISEVSASDLVLGLHDQSFLH 481
           C + P+ K+EIVV EGDQ+G  I + + E+ AS LV+GLHDQSFL+
Sbjct: 68  CSDFPNTKIEIVVTEGDQEGDRIVAVVREIGASALVVGLHDQSFLY 113


>ref|XP_004137615.1| PREDICTED: uncharacterized protein LOC101206357 [Cucumis sativus]
           gi|449487033|ref|XP_004157475.1| PREDICTED:
           uncharacterized LOC101206357 [Cucumis sativus]
          Length = 207

 Score = 84.0 bits (206), Expect(2) = 1e-25
 Identities = 40/65 (61%), Positives = 53/65 (81%)
 Frame = +3

Query: 72  RKILXXXXXXXXARTALQWALHNLLRFGDLIILLHVFPSTRSRNNNKQRSLRLKGFQLAL 251
           RKI+        ARTAL+WAL+NL+R+GDLI LLHVFPSTRS++++K R+ RL G+QLAL
Sbjct: 4   RKIVVIVEDVEVARTALKWALNNLMRYGDLITLLHVFPSTRSKSSSKVRNRRLNGYQLAL 63

Query: 252 SFKDL 266
           +F+DL
Sbjct: 64  TFRDL 68



 Score = 57.4 bits (137), Expect(2) = 1e-25
 Identities = 26/46 (56%), Positives = 34/46 (73%)
 Frame = +2

Query: 344 CDEVPDAKVEIVVREGDQDGRTIASTISEVSASDLVLGLHDQSFLH 481
           C+  P+ KVEIVV EGDQ+GR I + + E+ AS LV+GLH  SFL+
Sbjct: 69  CNTFPNTKVEIVVTEGDQEGRKITAIVREIGASVLVVGLHSHSFLY 114


>ref|XP_003525644.1| PREDICTED: uncharacterized protein LOC100801011 [Glycine max]
          Length = 197

 Score = 85.5 bits (210), Expect(2) = 1e-23
 Identities = 38/53 (71%), Positives = 48/53 (90%)
 Frame = +3

Query: 108 ARTALQWALHNLLRFGDLIILLHVFPSTRSRNNNKQRSLRLKGFQLALSFKDL 266
           ARTALQWALHN++R+GD+I LLHV+P TRS++ NK R LRL+GFQLALSF+D+
Sbjct: 16  ARTALQWALHNIIRYGDIITLLHVYPLTRSKSKNKARVLRLRGFQLALSFQDI 68



 Score = 48.9 bits (115), Expect(2) = 1e-23
 Identities = 22/46 (47%), Positives = 33/46 (71%)
 Frame = +2

Query: 344 CDEVPDAKVEIVVREGDQDGRTIASTISEVSASDLVLGLHDQSFLH 481
           C+   + KVEIVV E +++G  I + + ++ AS LV+GLHDQSFL+
Sbjct: 69  CNNFSNTKVEIVVTEENKEGMKIVAMVRQIGASMLVVGLHDQSFLY 114


>ref|XP_003551257.1| PREDICTED: uncharacterized protein LOC100817650 [Glycine max]
          Length = 247

 Score = 73.9 bits (180), Expect(2) = 2e-23
 Identities = 37/66 (56%), Positives = 50/66 (75%), Gaps = 1/66 (1%)
 Frame = +3

Query: 72  RKILXXXXXXXXARTALQWALHNLLRFGDLIILLHVF-PSTRSRNNNKQRSLRLKGFQLA 248
           +KI+        ARTAL+WAL N++R+GD+I LLHV+  STRSR+ +K R LRL GF+LA
Sbjct: 4   KKIVVVVEDVNAARTALEWALRNIIRYGDIITLLHVYNHSTRSRSRSKARLLRLNGFKLA 63

Query: 249 LSFKDL 266
           LSF+D+
Sbjct: 64  LSFQDM 69



 Score = 60.1 bits (144), Expect(2) = 2e-23
 Identities = 27/46 (58%), Positives = 36/46 (78%)
 Frame = +2

Query: 344 CDEVPDAKVEIVVREGDQDGRTIASTISEVSASDLVLGLHDQSFLH 481
           C+  P+ KVEI+V EGDQ+G  IA+T+ E+ AS LV+GLHD SFL+
Sbjct: 70  CNSYPNTKVEIIVIEGDQEGTKIAATVREIGASMLVVGLHDYSFLY 115


>ref|XP_002317926.1| predicted protein [Populus trichocarpa] gi|222858599|gb|EEE96146.1|
           predicted protein [Populus trichocarpa]
          Length = 213

 Score = 79.7 bits (195), Expect(2) = 4e-23
 Identities = 43/67 (64%), Positives = 48/67 (71%), Gaps = 2/67 (2%)
 Frame = +3

Query: 72  RKILXXXXXXXXARTALQWALHNLLRFGDLIILLHVF--PSTRSRNNNKQRSLRLKGFQL 245
           RKI+        ARTAL+WALHNLLRFGD I LLHVF      SR+ NK R LRLKG+QL
Sbjct: 4   RKIVVVVEDVDAARTALKWALHNLLRFGDFITLLHVFSPAMNSSRSKNKIRLLRLKGYQL 63

Query: 246 ALSFKDL 266
           ALSFKD+
Sbjct: 64  ALSFKDI 70



 Score = 53.1 bits (126), Expect(2) = 4e-23
 Identities = 24/46 (52%), Positives = 34/46 (73%)
 Frame = +2

Query: 344 CDEVPDAKVEIVVREGDQDGRTIASTISEVSASDLVLGLHDQSFLH 481
           C+   +  VEI+V EGDQ+G  IA+ + E+ AS LV+GLHD+SFL+
Sbjct: 71  CNNFFNTNVEIIVTEGDQEGGKIAAMVREIGASALVVGLHDRSFLY 116


Top