BLASTX nr result

ID: Coptis23_contig00017092 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00017092
         (455 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002302736.1| predicted protein [Populus trichocarpa] gi|2...   128   5e-28
ref|XP_002269237.2| PREDICTED: kinesin-4-like [Vitis vinifera]        124   8e-27
emb|CBI36904.3| unnamed protein product [Vitis vinifera]              124   8e-27
ref|XP_003553662.1| PREDICTED: kinesin-4-like [Glycine max]           119   2e-25
ref|XP_002320328.1| predicted protein [Populus trichocarpa] gi|2...   119   3e-25

>ref|XP_002302736.1| predicted protein [Populus trichocarpa] gi|222844462|gb|EEE82009.1|
           predicted protein [Populus trichocarpa]
          Length = 1003

 Score =  128 bits (321), Expect = 5e-28
 Identities = 71/150 (47%), Positives = 102/150 (68%), Gaps = 1/150 (0%)
 Frame = +3

Query: 3   GMSRFGGSLKPSNSGKYFTRKNSEPFTNSLSRNASMNEKSFGVELNSNGDLAHDTDM-NN 179
           G+ +FGG++KP+ S K F RKNSEPF NSLSRN SMNEKSF      + DL +   M  +
Sbjct: 171 GIWKFGGNVKPTVSAKSFVRKNSEPFMNSLSRNLSMNEKSFNT---LSSDLENSNKMPGS 227

Query: 180 RSLNMLVRTLLSEKKPEDVPILVESMLNKVIEEFERRLASHNESMKTAMKDMVVCEGGKS 359
            SL+MLVR +L +KKPE+VP LVES+L+KV+EEFE R+AS  + +K A K+M + +G + 
Sbjct: 228 GSLSMLVRAVLLDKKPEEVPALVESVLSKVVEEFENRIASQYDMVKAAPKEMTISQGNRF 287

Query: 360 LPRTASGEMKRKVEVKSVNGTRETQYCQDN 449
           L ++A G+  ++ E K+V   ++ +    N
Sbjct: 288 LLKSACGD--KRTEEKNVRVMKKEECFHKN 315


>ref|XP_002269237.2| PREDICTED: kinesin-4-like [Vitis vinifera]
          Length = 1011

 Score =  124 bits (311), Expect = 8e-27
 Identities = 72/141 (51%), Positives = 94/141 (66%), Gaps = 4/141 (2%)
 Frame = +3

Query: 3   GMSRFGGSLKPSNSGKYFTRKNSEPFTNSLSRNASMNEKSFGVELNSNGDLAHDTDMNNR 182
           G+ +FGG++KP+ +GK F RKNSEPFTNS SRN S +E       NS   ++ D D N  
Sbjct: 171 GIWKFGGNVKPAATGKSFVRKNSEPFTNSFSRNLSASE-------NSLNAISMDLDTNKM 223

Query: 183 ----SLNMLVRTLLSEKKPEDVPILVESMLNKVIEEFERRLASHNESMKTAMKDMVVCEG 350
               SL+MLVR++L +KKPE+VP+LVES+L KV+EEFE R+AS NE  KT  K + V   
Sbjct: 224 PSSGSLSMLVRSILLDKKPEEVPMLVESVLTKVVEEFEHRIASQNELRKTPSKVLAVSNS 283

Query: 351 GKSLPRTASGEMKRKVEVKSV 413
            KSL R AS +   K+E K+V
Sbjct: 284 NKSLLRAASSD--TKIEDKNV 302


>emb|CBI36904.3| unnamed protein product [Vitis vinifera]
          Length = 1017

 Score =  124 bits (311), Expect = 8e-27
 Identities = 72/141 (51%), Positives = 94/141 (66%), Gaps = 4/141 (2%)
 Frame = +3

Query: 3   GMSRFGGSLKPSNSGKYFTRKNSEPFTNSLSRNASMNEKSFGVELNSNGDLAHDTDMNNR 182
           G+ +FGG++KP+ +GK F RKNSEPFTNS SRN S +E       NS   ++ D D N  
Sbjct: 171 GIWKFGGNVKPAATGKSFVRKNSEPFTNSFSRNLSASE-------NSLNAISMDLDTNKM 223

Query: 183 ----SLNMLVRTLLSEKKPEDVPILVESMLNKVIEEFERRLASHNESMKTAMKDMVVCEG 350
               SL+MLVR++L +KKPE+VP+LVES+L KV+EEFE R+AS NE  KT  K + V   
Sbjct: 224 PSSGSLSMLVRSILLDKKPEEVPMLVESVLTKVVEEFEHRIASQNELRKTPSKVLAVSNS 283

Query: 351 GKSLPRTASGEMKRKVEVKSV 413
            KSL R AS +   K+E K+V
Sbjct: 284 NKSLLRAASSD--TKIEDKNV 302


>ref|XP_003553662.1| PREDICTED: kinesin-4-like [Glycine max]
          Length = 1011

 Score =  119 bits (299), Expect = 2e-25
 Identities = 66/135 (48%), Positives = 88/135 (65%)
 Frame = +3

Query: 3   GMSRFGGSLKPSNSGKYFTRKNSEPFTNSLSRNASMNEKSFGVELNSNGDLAHDTDMNNR 182
           G+ +FGG+LKP+ + K F RKNS+PFTNSLSR +S+N+KS       N D+       + 
Sbjct: 170 GVWKFGGNLKPTVTSKSFVRKNSDPFTNSLSRTSSLNDKSIAA---FNSDVESIKMSGSH 226

Query: 183 SLNMLVRTLLSEKKPEDVPILVESMLNKVIEEFERRLASHNESMKTAMKDMVVCEGGKSL 362
           SL+MLVR +LS+KKPE+VP LVES+LNKV+EEFE+R+AS  E  K   +D V    G ++
Sbjct: 227 SLSMLVRAILSDKKPEEVPTLVESVLNKVVEEFEQRIASQGEQTKVTSRDPVSQSNGSAM 286

Query: 363 PRTASGEMKRKVEVK 407
                GE K  V  K
Sbjct: 287 -ADKKGEKKIHVVTK 300


>ref|XP_002320328.1| predicted protein [Populus trichocarpa] gi|222861101|gb|EEE98643.1|
           predicted protein [Populus trichocarpa]
          Length = 957

 Score =  119 bits (297), Expect = 3e-25
 Identities = 65/134 (48%), Positives = 96/134 (71%), Gaps = 1/134 (0%)
 Frame = +3

Query: 3   GMSRFGGSLKPSNSGKYFTRKNSEPFTNSLSRNASMNEKSFGVELNSNGDLAHDTDMNNR 182
           G+ +FGG++KP  S K F RKNSEPF NSLSRN S+N KSF    + + DL +   M+  
Sbjct: 171 GIWKFGGNVKPPVSAKSFVRKNSEPFMNSLSRNLSINGKSFN---SLSSDLEYSNKMSGS 227

Query: 183 -SLNMLVRTLLSEKKPEDVPILVESMLNKVIEEFERRLASHNESMKTAMKDMVVCEGGKS 359
            SL+MLVR +L +KKP++VP+LVES+L+KV+EEFE R+AS  +  K A K++ + +G K 
Sbjct: 228 GSLSMLVRAVLLDKKPDEVPMLVESVLSKVVEEFESRIASQYDMAKEAPKEIAISQGNKF 287

Query: 360 LPRTASGEMKRKVE 401
           L + ++G+ KR+++
Sbjct: 288 LLK-STGDNKRELK 300


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