BLASTX nr result

ID: Coptis23_contig00017081 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00017081
         (528 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269610.2| PREDICTED: cellulose synthase A catalytic su...   270   7e-71
emb|CBI30712.3| unnamed protein product [Vitis vinifera]              270   7e-71
gb|ACJ38664.1| cellulose synthase [Betula luminifera]                 270   1e-70
ref|XP_004161207.1| PREDICTED: LOW QUALITY PROTEIN: cellulose sy...   268   3e-70
ref|XP_004150226.1| PREDICTED: LOW QUALITY PROTEIN: cellulose sy...   268   3e-70

>ref|XP_002269610.2| PREDICTED: cellulose synthase A catalytic subunit 8 [UDP-forming]
            [Vitis vinifera]
          Length = 1360

 Score =  270 bits (691), Expect = 7e-71
 Identities = 129/154 (83%), Positives = 141/154 (91%)
 Frame = +2

Query: 2    VIGGVSAHFFAVFQGFLKMLAGLDTNFTVTAKAAEDAEFGELYMIKWXXXXXXXXXXXVV 181
            VIGGVSAH FAVFQGFLKM+AGLDTNFTVTAKAA+D EFGELYMIKW           ++
Sbjct: 1207 VIGGVSAHLFAVFQGFLKMVAGLDTNFTVTAKAADDGEFGELYMIKWTTLLIPPTTLLII 1266

Query: 182  NIVGVVAGFSDALNSGYEAWGPLFGKVFFAFWVILHLYPFLKGLMGRQNRTPTIVVLWSV 361
            N+VGVVAGFSDALNSGYEAWGPLFGKVFFAFWVILHLYPFLKGLMGRQNRTPTIVVLWSV
Sbjct: 1267 NLVGVVAGFSDALNSGYEAWGPLFGKVFFAFWVILHLYPFLKGLMGRQNRTPTIVVLWSV 1326

Query: 362  LLASVFSLLWVKVDPFLKKVDSTTIAQSCISIDC 463
            LLASVFSL+WVK++PF++KVD++TIAQSCISIDC
Sbjct: 1327 LLASVFSLVWVKINPFVQKVDNSTIAQSCISIDC 1360


>emb|CBI30712.3| unnamed protein product [Vitis vinifera]
          Length = 983

 Score =  270 bits (691), Expect = 7e-71
 Identities = 129/154 (83%), Positives = 141/154 (91%)
 Frame = +2

Query: 2    VIGGVSAHFFAVFQGFLKMLAGLDTNFTVTAKAAEDAEFGELYMIKWXXXXXXXXXXXVV 181
            VIGGVSAH FAVFQGFLKM+AGLDTNFTVTAKAA+D EFGELYMIKW           ++
Sbjct: 830  VIGGVSAHLFAVFQGFLKMVAGLDTNFTVTAKAADDGEFGELYMIKWTTLLIPPTTLLII 889

Query: 182  NIVGVVAGFSDALNSGYEAWGPLFGKVFFAFWVILHLYPFLKGLMGRQNRTPTIVVLWSV 361
            N+VGVVAGFSDALNSGYEAWGPLFGKVFFAFWVILHLYPFLKGLMGRQNRTPTIVVLWSV
Sbjct: 890  NLVGVVAGFSDALNSGYEAWGPLFGKVFFAFWVILHLYPFLKGLMGRQNRTPTIVVLWSV 949

Query: 362  LLASVFSLLWVKVDPFLKKVDSTTIAQSCISIDC 463
            LLASVFSL+WVK++PF++KVD++TIAQSCISIDC
Sbjct: 950  LLASVFSLVWVKINPFVQKVDNSTIAQSCISIDC 983


>gb|ACJ38664.1| cellulose synthase [Betula luminifera]
          Length = 985

 Score =  270 bits (689), Expect = 1e-70
 Identities = 129/154 (83%), Positives = 140/154 (90%)
 Frame = +2

Query: 2    VIGGVSAHFFAVFQGFLKMLAGLDTNFTVTAKAAEDAEFGELYMIKWXXXXXXXXXXXVV 181
            VIGGVSAH FAVFQGFLKMLAG+DTNFTVTAKAA+DAEFGELY+IKW           +V
Sbjct: 832  VIGGVSAHLFAVFQGFLKMLAGVDTNFTVTAKAADDAEFGELYIIKWTTVLIPPTTLIIV 891

Query: 182  NIVGVVAGFSDALNSGYEAWGPLFGKVFFAFWVILHLYPFLKGLMGRQNRTPTIVVLWSV 361
            N+VGVVAGFSDALN GYEAWGPLFGKVFFAFWVILHLYPFLKGLMGRQNRTPTIVVLWSV
Sbjct: 892  NMVGVVAGFSDALNKGYEAWGPLFGKVFFAFWVILHLYPFLKGLMGRQNRTPTIVVLWSV 951

Query: 362  LLASVFSLLWVKVDPFLKKVDSTTIAQSCISIDC 463
            LLASVFSL+WVK++PF+ KVDS+T+AQSCISIDC
Sbjct: 952  LLASVFSLIWVKINPFVSKVDSSTVAQSCISIDC 985


>ref|XP_004161207.1| PREDICTED: LOW QUALITY PROTEIN: cellulose synthase A catalytic
            subunit 8 [UDP-forming]-like [Cucumis sativus]
          Length = 1390

 Score =  268 bits (686), Expect = 3e-70
 Identities = 128/154 (83%), Positives = 139/154 (90%)
 Frame = +2

Query: 2    VIGGVSAHFFAVFQGFLKMLAGLDTNFTVTAKAAEDAEFGELYMIKWXXXXXXXXXXXVV 181
            VIGGVSAH FAVFQGFLKMLAG+DTNFTVTAKAA+DAEFGELYM+KW           VV
Sbjct: 1237 VIGGVSAHLFAVFQGFLKMLAGIDTNFTVTAKAADDAEFGELYMVKWTTLLIPPTTLIVV 1296

Query: 182  NIVGVVAGFSDALNSGYEAWGPLFGKVFFAFWVILHLYPFLKGLMGRQNRTPTIVVLWSV 361
            N+VGVVAGFSDALN GYEAWGPLFGKVFFAFWVI HLYPFLKGLMGRQNRTPTIVVLWSV
Sbjct: 1297 NMVGVVAGFSDALNGGYEAWGPLFGKVFFAFWVIFHLYPFLKGLMGRQNRTPTIVVLWSV 1356

Query: 362  LLASVFSLLWVKVDPFLKKVDSTTIAQSCISIDC 463
            LLASVFSL+WVK++PF+ +VDSTT+AQSCI+IDC
Sbjct: 1357 LLASVFSLVWVKINPFVNQVDSTTVAQSCIAIDC 1390


>ref|XP_004150226.1| PREDICTED: LOW QUALITY PROTEIN: cellulose synthase A catalytic
            subunit 8 [UDP-forming]-like [Cucumis sativus]
          Length = 1362

 Score =  268 bits (686), Expect = 3e-70
 Identities = 128/154 (83%), Positives = 139/154 (90%)
 Frame = +2

Query: 2    VIGGVSAHFFAVFQGFLKMLAGLDTNFTVTAKAAEDAEFGELYMIKWXXXXXXXXXXXVV 181
            VIGGVSAH FAVFQGFLKMLAG+DTNFTVTAKAA+DAEFGELYM+KW           VV
Sbjct: 1209 VIGGVSAHLFAVFQGFLKMLAGIDTNFTVTAKAADDAEFGELYMVKWTTLLIPPTTLIVV 1268

Query: 182  NIVGVVAGFSDALNSGYEAWGPLFGKVFFAFWVILHLYPFLKGLMGRQNRTPTIVVLWSV 361
            N+VGVVAGFSDALN GYEAWGPLFGKVFFAFWVI HLYPFLKGLMGRQNRTPTIVVLWSV
Sbjct: 1269 NMVGVVAGFSDALNGGYEAWGPLFGKVFFAFWVIFHLYPFLKGLMGRQNRTPTIVVLWSV 1328

Query: 362  LLASVFSLLWVKVDPFLKKVDSTTIAQSCISIDC 463
            LLASVFSL+WVK++PF+ +VDSTT+AQSCI+IDC
Sbjct: 1329 LLASVFSLVWVKINPFVNQVDSTTVAQSCIAIDC 1362


Top