BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00017078
         (292 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAF36296.1| hypothetical protein [Ipomoea trifida]                128   4e-28
ref|XP_003562090.1| PREDICTED: uncharacterized protein LOC100840...   127   7e-28
ref|XP_002879125.1| cdk-subunit 1 [Arabidopsis lyrata subsp. lyr...   127   7e-28
gb|AAS79576.1| putative CDK regulatory subunit [Ipomoea trifida]      127   7e-28
ref|NP_180363.1| cyclin-dependent kinases regulatory subunit 1 [...   127   1e-27

>dbj|BAF36296.1| hypothetical protein [Ipomoea trifida]
          Length = 1291

 Score =  128 bits (322), Expect = 4e-28
 Identities = 61/68 (89%), Positives = 65/68 (95%), Gaps = 1/68 (1%)
 Frame = -3

Query: 203  IHFTLIS-KMGQIQYSEKYFDDTFEYRHVVLPPEVAKLLPKNRLLSENEWRAIGVQQSRG 27
            + F +I+ +MGQIQYSEKYFDDTFEYRHVVLPPEVAKLLPKNRLLSENEWRAIGVQQSRG
Sbjct: 1195 VSFRVIAVEMGQIQYSEKYFDDTFEYRHVVLPPEVAKLLPKNRLLSENEWRAIGVQQSRG 1254

Query: 26   WVHYAIHR 3
            WVHYAIHR
Sbjct: 1255 WVHYAIHR 1262


>ref|XP_003562090.1| PREDICTED: uncharacterized protein LOC100840494 [Brachypodium
           distachyon]
          Length = 184

 Score =  127 bits (320), Expect = 7e-28
 Identities = 58/69 (84%), Positives = 64/69 (92%)
 Frame = -3

Query: 209 KAIHFTLISKMGQIQYSEKYFDDTFEYRHVVLPPEVAKLLPKNRLLSENEWRAIGVQQSR 30
           K +   L+ +MGQIQYSEKYFDDTFEYRHVVLPPEVAKLLPKNRLL+ENEWRA+GVQQSR
Sbjct: 85  KRLDRELLVEMGQIQYSEKYFDDTFEYRHVVLPPEVAKLLPKNRLLAENEWRALGVQQSR 144

Query: 29  GWVHYAIHR 3
           GWVHYA+HR
Sbjct: 145 GWVHYAVHR 153


>ref|XP_002879125.1| cdk-subunit 1 [Arabidopsis lyrata subsp. lyrata]
           gi|297324964|gb|EFH55384.1| cdk-subunit 1 [Arabidopsis
           lyrata subsp. lyrata]
          Length = 87

 Score =  127 bits (320), Expect = 7e-28
 Identities = 59/59 (100%), Positives = 59/59 (100%)
 Frame = -3

Query: 179 MGQIQYSEKYFDDTFEYRHVVLPPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHR 3
           MGQIQYSEKYFDDTFEYRHVVLPPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHR
Sbjct: 1   MGQIQYSEKYFDDTFEYRHVVLPPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHR 59


>gb|AAS79576.1| putative CDK regulatory subunit [Ipomoea trifida]
          Length = 88

 Score =  127 bits (320), Expect = 7e-28
 Identities = 59/59 (100%), Positives = 59/59 (100%)
 Frame = -3

Query: 179 MGQIQYSEKYFDDTFEYRHVVLPPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHR 3
           MGQIQYSEKYFDDTFEYRHVVLPPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHR
Sbjct: 1   MGQIQYSEKYFDDTFEYRHVVLPPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHR 59


>ref|NP_180363.1| cyclin-dependent kinases regulatory subunit 1 [Arabidopsis
           thaliana] gi|75097781|sp|O23249.1|CKS1_ARATH RecName:
           Full=Cyclin-dependent kinases regulatory subunit 1;
           AltName: Full=CKS1-At gi|2274859|emb|CAA03859.1| Cks1
           protein [Arabidopsis thaliana] gi|4510420|gb|AAD21506.1|
           putative cyclin-dependent kinase regulatory subunit
           [Arabidopsis thaliana] gi|21593913|gb|AAM65878.1|
           putative cyclin-dependent kinase regulatory subunit
           [Arabidopsis thaliana] gi|51969580|dbj|BAD43482.1|
           putative cyclin-dependent kinase regulatory subunit
           [Arabidopsis thaliana] gi|51969798|dbj|BAD43591.1|
           putative cyclin-dependent kinase regulatory subunit
           [Arabidopsis thaliana] gi|51970380|dbj|BAD43882.1|
           putative cyclin-dependent kinase regulatory subunit
           [Arabidopsis thaliana] gi|88010880|gb|ABD38867.1|
           At2g27960 [Arabidopsis thaliana]
           gi|330252970|gb|AEC08064.1| cyclin-dependent kinases
           regulatory subunit 1 [Arabidopsis thaliana]
          Length = 87

 Score =  127 bits (319), Expect = 1e-27
 Identities = 58/59 (98%), Positives = 59/59 (100%)
 Frame = -3

Query: 179 MGQIQYSEKYFDDTFEYRHVVLPPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHR 3
           MGQIQYSEKYFDDTFEYRHVVLPPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYA+HR
Sbjct: 1   MGQIQYSEKYFDDTFEYRHVVLPPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAVHR 59