BLASTX nr result

ID: Coptis23_contig00017066 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00017066
         (232 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002522162.1| conserved hypothetical protein [Ricinus comm...   125   3e-27
ref|XP_003554121.1| PREDICTED: uncharacterized protein LOC100805...   125   5e-27
ref|XP_003554120.1| PREDICTED: uncharacterized protein LOC100805...   125   5e-27
gb|ABD33028.1| UBA-like [Medicago truncatula]                         124   1e-26
ref|XP_003624969.1| Ubiquitin-associated domain-containing prote...   124   1e-26

>ref|XP_002522162.1| conserved hypothetical protein [Ricinus communis]
           gi|223538600|gb|EEF40203.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 289

 Score =  125 bits (315), Expect = 3e-27
 Identities = 59/76 (77%), Positives = 67/76 (88%)
 Frame = +3

Query: 3   DNAPVTRAFVIASALLTILIGVRGSSSKLGLSYQDIFGRLRLWRLFASVFAFSSTPELMF 182
           DNAPVTR FVIA A+ T+  G++G   KLGLSYQDIFG+LR+W+L ASVFAFSSTPEL+F
Sbjct: 7   DNAPVTRTFVIACAIFTLSFGIQGGFRKLGLSYQDIFGKLRIWKLIASVFAFSSTPELLF 66

Query: 183 GLYLLYYFRVFERQIG 230
           GLYLLYYFRVFERQIG
Sbjct: 67  GLYLLYYFRVFERQIG 82


>ref|XP_003554121.1| PREDICTED: uncharacterized protein LOC100805217 isoform 2 [Glycine
           max]
          Length = 280

 Score =  125 bits (313), Expect = 5e-27
 Identities = 59/75 (78%), Positives = 66/75 (88%)
 Frame = +3

Query: 6   NAPVTRAFVIASALLTILIGVRGSSSKLGLSYQDIFGRLRLWRLFASVFAFSSTPELMFG 185
           NAPVTRAF+I SAL TI  G++G  S LGLSYQDIFG+LRLW+L  S+F+FSSTPELMFG
Sbjct: 10  NAPVTRAFIITSALFTIFFGIQGRFSTLGLSYQDIFGKLRLWKLIISIFSFSSTPELMFG 69

Query: 186 LYLLYYFRVFERQIG 230
           LYLLYYFRVFERQIG
Sbjct: 70  LYLLYYFRVFERQIG 84


>ref|XP_003554120.1| PREDICTED: uncharacterized protein LOC100805217 isoform 1 [Glycine
           max]
          Length = 293

 Score =  125 bits (313), Expect = 5e-27
 Identities = 59/75 (78%), Positives = 66/75 (88%)
 Frame = +3

Query: 6   NAPVTRAFVIASALLTILIGVRGSSSKLGLSYQDIFGRLRLWRLFASVFAFSSTPELMFG 185
           NAPVTRAF+I SAL TI  G++G  S LGLSYQDIFG+LRLW+L  S+F+FSSTPELMFG
Sbjct: 10  NAPVTRAFIITSALFTIFFGIQGRFSTLGLSYQDIFGKLRLWKLIISIFSFSSTPELMFG 69

Query: 186 LYLLYYFRVFERQIG 230
           LYLLYYFRVFERQIG
Sbjct: 70  LYLLYYFRVFERQIG 84


>gb|ABD33028.1| UBA-like [Medicago truncatula]
          Length = 298

 Score =  124 bits (310), Expect = 1e-26
 Identities = 58/75 (77%), Positives = 67/75 (89%)
 Frame = +3

Query: 6   NAPVTRAFVIASALLTILIGVRGSSSKLGLSYQDIFGRLRLWRLFASVFAFSSTPELMFG 185
           NAPVTRAF+IASAL TI  G++G  + LGLSYQDIFG+LR+W+L  SVF+F+STPELMFG
Sbjct: 10  NAPVTRAFIIASALFTIFFGIQGRFNTLGLSYQDIFGKLRIWKLIMSVFSFTSTPELMFG 69

Query: 186 LYLLYYFRVFERQIG 230
           LYLLYYFRVFERQIG
Sbjct: 70  LYLLYYFRVFERQIG 84


>ref|XP_003624969.1| Ubiquitin-associated domain-containing protein [Medicago
           truncatula] gi|355499984|gb|AES81187.1|
           Ubiquitin-associated domain-containing protein [Medicago
           truncatula]
          Length = 292

 Score =  124 bits (310), Expect = 1e-26
 Identities = 58/75 (77%), Positives = 67/75 (89%)
 Frame = +3

Query: 6   NAPVTRAFVIASALLTILIGVRGSSSKLGLSYQDIFGRLRLWRLFASVFAFSSTPELMFG 185
           NAPVTRAF+IASAL TI  G++G  + LGLSYQDIFG+LR+W+L  SVF+F+STPELMFG
Sbjct: 10  NAPVTRAFIIASALFTIFFGIQGRFNTLGLSYQDIFGKLRIWKLIMSVFSFTSTPELMFG 69

Query: 186 LYLLYYFRVFERQIG 230
           LYLLYYFRVFERQIG
Sbjct: 70  LYLLYYFRVFERQIG 84


Top