BLASTX nr result

ID: Coptis23_contig00017065 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00017065
         (689 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002310272.1| predicted protein [Populus trichocarpa] gi|2...   357   9e-97
emb|CBI17444.3| unnamed protein product [Vitis vinifera]              349   3e-94
ref|XP_002268141.1| PREDICTED: uncharacterized protein LOC100266...   349   3e-94
ref|XP_002867016.1| predicted protein [Arabidopsis lyrata subsp....   330   2e-88
gb|AAM20633.1| putative protein [Arabidopsis thaliana] gi|221364...   328   5e-88

>ref|XP_002310272.1| predicted protein [Populus trichocarpa] gi|222853175|gb|EEE90722.1|
           predicted protein [Populus trichocarpa]
          Length = 395

 Score =  357 bits (917), Expect = 9e-97
 Identities = 160/205 (78%), Positives = 187/205 (91%)
 Frame = -3

Query: 615 SFVVPQSNCYAFDNSSHIYDFTSWIGHPFEQDGKDSDIVIRFCKDVESRSQTGYVEFGRF 436
           S  VP SNCYA DNSS I DF+SWIGH FE +GK++D+VIRFCKDVE+RSQTGYV+FGRF
Sbjct: 17  SVAVPSSNCYALDNSSRIVDFSSWIGHFFEYEGKETDVVIRFCKDVEARSQTGYVDFGRF 76

Query: 435 DTFHHFVAGTGHVNFVQGFYNGDLMNCEQSFDKLGRTAQVNIICGSCLNGACKGQLGCIC 256
           + F+HFVAG+G V+FVQG+YNGDL+NCEQS+DKLGRTAQVNIICGSCLNG CKG+LGCIC
Sbjct: 77  NNFNHFVAGSGRVDFVQGYYNGDLLNCEQSYDKLGRTAQVNIICGSCLNGQCKGELGCIC 136

Query: 255 NVIYDSTCRVFVELAVPCEKPGPRIFKGFTVGFHPRSWEVVYNGLTQLGYEALRHEFSFG 76
           NV  +S+CR+FVELA+PCEKPGPR+F+GFTVGFHPRSWE+VYNGLTQLGYE   H+FSF 
Sbjct: 137 NVTQESSCRIFVELAIPCEKPGPRVFEGFTVGFHPRSWEIVYNGLTQLGYEKSHHDFSFT 196

Query: 75  TEQTRVSLYMTAISSLSTLVGKPML 1
           TEQT+V+LYMTAI+SLSTLV KPM+
Sbjct: 197 TEQTQVTLYMTAIASLSTLVRKPMI 221


>emb|CBI17444.3| unnamed protein product [Vitis vinifera]
          Length = 589

 Score =  349 bits (896), Expect = 3e-94
 Identities = 157/211 (74%), Positives = 184/211 (87%)
 Frame = -3

Query: 639 ILQVHIATSFVVPQSNCYAFDNSSHIYDFTSWIGHPFEQDGKDSDIVIRFCKDVESRSQT 460
           ILQ   A+S V P SNCYA DNSSHI+DF+SW+G PFE DGKDSD+V+RFCKDVESRSQT
Sbjct: 204 ILQAPGASSIVAPSSNCYALDNSSHIFDFSSWLGQPFEYDGKDSDLVVRFCKDVESRSQT 263

Query: 459 GYVEFGRFDTFHHFVAGTGHVNFVQGFYNGDLMNCEQSFDKLGRTAQVNIICGSCLNGAC 280
           GYV+FGRFD F++FVAG+GH+NFVQ FYNGDL+NCE + DK+GRTAQVNIICGSC NG C
Sbjct: 264 GYVDFGRFDKFNYFVAGSGHINFVQEFYNGDLLNCETTHDKMGRTAQVNIICGSCSNGQC 323

Query: 279 KGQLGCICNVIYDSTCRVFVELAVPCEKPGPRIFKGFTVGFHPRSWEVVYNGLTQLGYEA 100
            G+LGCICNV Y+STCRV VELA+PC++ G R+F+GFTVGFHPRSWE+VYNG+TQLG++ 
Sbjct: 324 AGELGCICNVTYESTCRVLVELAIPCKEQGVRVFEGFTVGFHPRSWEIVYNGMTQLGFDK 383

Query: 99  LRHEFSFGTEQTRVSLYMTAISSLSTLVGKP 7
             H FSFGTE T V+LYMTAI+SLSTLV KP
Sbjct: 384 SHHAFSFGTEHTYVALYMTAIASLSTLVQKP 414


>ref|XP_002268141.1| PREDICTED: uncharacterized protein LOC100266005 [Vitis vinifera]
          Length = 410

 Score =  349 bits (896), Expect = 3e-94
 Identities = 157/211 (74%), Positives = 184/211 (87%)
 Frame = -3

Query: 639 ILQVHIATSFVVPQSNCYAFDNSSHIYDFTSWIGHPFEQDGKDSDIVIRFCKDVESRSQT 460
           ILQ   A+S V P SNCYA DNSSHI+DF+SW+G PFE DGKDSD+V+RFCKDVESRSQT
Sbjct: 25  ILQAPGASSIVAPSSNCYALDNSSHIFDFSSWLGQPFEYDGKDSDLVVRFCKDVESRSQT 84

Query: 459 GYVEFGRFDTFHHFVAGTGHVNFVQGFYNGDLMNCEQSFDKLGRTAQVNIICGSCLNGAC 280
           GYV+FGRFD F++FVAG+GH+NFVQ FYNGDL+NCE + DK+GRTAQVNIICGSC NG C
Sbjct: 85  GYVDFGRFDKFNYFVAGSGHINFVQEFYNGDLLNCETTHDKMGRTAQVNIICGSCSNGQC 144

Query: 279 KGQLGCICNVIYDSTCRVFVELAVPCEKPGPRIFKGFTVGFHPRSWEVVYNGLTQLGYEA 100
            G+LGCICNV Y+STCRV VELA+PC++ G R+F+GFTVGFHPRSWE+VYNG+TQLG++ 
Sbjct: 145 AGELGCICNVTYESTCRVLVELAIPCKEQGVRVFEGFTVGFHPRSWEIVYNGMTQLGFDK 204

Query: 99  LRHEFSFGTEQTRVSLYMTAISSLSTLVGKP 7
             H FSFGTE T V+LYMTAI+SLSTLV KP
Sbjct: 205 SHHAFSFGTEHTYVALYMTAIASLSTLVQKP 235


>ref|XP_002867016.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297312852|gb|EFH43275.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 405

 Score =  330 bits (845), Expect = 2e-88
 Identities = 149/219 (68%), Positives = 182/219 (83%)
 Frame = -3

Query: 657 VLFTYGILQVHIATSFVVPQSNCYAFDNSSHIYDFTSWIGHPFEQDGKDSDIVIRFCKDV 478
           +LF +    V  A S  VP SNCYA DNSS + +F+SWIGHPFE DGK+ D+V+RFCKDV
Sbjct: 11  ILFLFISAFVIGAASVPVPDSNCYALDNSSRLVEFSSWIGHPFEYDGKEFDLVVRFCKDV 70

Query: 477 ESRSQTGYVEFGRFDTFHHFVAGTGHVNFVQGFYNGDLMNCEQSFDKLGRTAQVNIICGS 298
           E+R Q GYV+FGRFD   +FV+ +G+ +FVQGFY+GDL NCEQS+DKLGRTAQVNIICG+
Sbjct: 71  ETRGQMGYVDFGRFDPLSYFVSSSGNFDFVQGFYHGDLSNCEQSYDKLGRTAQVNIICGN 130

Query: 297 CLNGACKGQLGCICNVIYDSTCRVFVELAVPCEKPGPRIFKGFTVGFHPRSWEVVYNGLT 118
           C +G CKG LGCIC+V  DSTCRV V+LA+PCEKPGPR+FKGFTVG HPRSWE++YNG+T
Sbjct: 131 CSDGRCKGGLGCICSVTQDSTCRVTVDLAIPCEKPGPRVFKGFTVGLHPRSWEIIYNGMT 190

Query: 117 QLGYEALRHEFSFGTEQTRVSLYMTAISSLSTLVGKPML 1
           Q G++  R EFSF TEQT ++LYMTAI+SLSTLVGKP++
Sbjct: 191 QFGFDKPRREFSFKTEQTHLTLYMTAIASLSTLVGKPII 229


>gb|AAM20633.1| putative protein [Arabidopsis thaliana] gi|22136408|gb|AAM91282.1|
           putative protein [Arabidopsis thaliana]
          Length = 406

 Score =  328 bits (842), Expect = 5e-88
 Identities = 149/219 (68%), Positives = 181/219 (82%)
 Frame = -3

Query: 657 VLFTYGILQVHIATSFVVPQSNCYAFDNSSHIYDFTSWIGHPFEQDGKDSDIVIRFCKDV 478
           +LF +    V  A S  VP SNCYA DNSS + DF+SWIGHPFE DGK+ D+V+RFCKDV
Sbjct: 11  ILFLFISAFVIGAASVPVPDSNCYALDNSSRLVDFSSWIGHPFEYDGKEFDLVVRFCKDV 70

Query: 477 ESRSQTGYVEFGRFDTFHHFVAGTGHVNFVQGFYNGDLMNCEQSFDKLGRTAQVNIICGS 298
           E+R Q GYV+FGRFD   +FV+ + + +FVQGFY+GDL NCEQS+DKLGRTAQVNIICG+
Sbjct: 71  ETRGQAGYVDFGRFDPLSYFVSSSENFDFVQGFYHGDLSNCEQSYDKLGRTAQVNIICGN 130

Query: 297 CLNGACKGQLGCICNVIYDSTCRVFVELAVPCEKPGPRIFKGFTVGFHPRSWEVVYNGLT 118
           C +G CKG LGCIC+V  DSTCRV V+LA+PCEKPGPR+FKGFTVG HPRSWE++YNG+T
Sbjct: 131 CSDGRCKGGLGCICSVTQDSTCRVTVDLAIPCEKPGPRVFKGFTVGLHPRSWEIIYNGMT 190

Query: 117 QLGYEALRHEFSFGTEQTRVSLYMTAISSLSTLVGKPML 1
           Q G++  R EFSF TEQT ++LYMTAI+SLSTLVGKP++
Sbjct: 191 QFGFDKPRREFSFKTEQTHLTLYMTAIASLSTLVGKPII 229


Top