BLASTX nr result

ID: Coptis23_contig00017061 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00017061
         (1507 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002325529.1| predicted protein [Populus trichocarpa] gi|2...   248   3e-63
ref|XP_002278756.2| PREDICTED: elongation factor 1-gamma-like [V...   246   1e-62
ref|XP_002264400.1| PREDICTED: elongation factor 1-gamma-like [V...   243   1e-61
emb|CAN75785.1| hypothetical protein VITISV_021574 [Vitis vinifera]   241   4e-61
gb|AFW71313.1| hypothetical protein ZEAMMB73_547198 [Zea mays]        241   5e-61

>ref|XP_002325529.1| predicted protein [Populus trichocarpa] gi|222862404|gb|EEE99910.1|
            predicted protein [Populus trichocarpa]
            gi|283136134|gb|ADB11386.1| gamma class glutathione
            transferase EF1Bgamma1 [Populus trichocarpa]
          Length = 426

 Score =  248 bits (633), Expect = 3e-63
 Identities = 158/409 (38%), Positives = 218/409 (53%), Gaps = 65/409 (15%)
 Frame = -1

Query: 1354 VLHTRDHDTNAYKVLIAAKYADIYVKHVKYSED------------------PVLKTPDGA 1229
            VLH    + NA K LIAA+Y+ + V+ VK  E                   PVL+TPDG 
Sbjct: 4    VLHAGSTNKNALKTLIAAEYSGVQVELVKNFEMGVSNKTPEFLKMNPIGKVPVLETPDGP 63

Query: 1228 ISESNAIVRYVARLEKTDSLYNSSQRE--EIEKWIDFSTFEICANIRRRWLSSCGF--YI 1061
            I ESNAI RYV RL+  + LY SS  E   IE+WIDF+T EI ANI R ++   GF  Y+
Sbjct: 64   IFESNAIARYVTRLKADNPLYGSSLIEYARIEQWIDFATLEIDANILRWFIPRIGFAVYL 123

Query: 1060 RPDVEHFLGSLESSLWVLNEHLDSKSFLVGQSETLADIIITCDLLFGINKGMTNSFMCEF 881
             P  E  + +L+ +L  LN HL + ++LVG S TLADI++TC+L  G ++ +T +F  EF
Sbjct: 124  PPAEEAAIAALKRALTALNTHLSTSTYLVGHSLTLADIVLTCNLTLGFSRLLTKTFTSEF 183

Query: 880  CHINSYFWEMIDLPNFRKVLGD-------SVLEKRFRFSRPWKPKDSAKQKARIDTLK-- 728
             H+  YFW M++ PNFRK+LG+         ++K  +   P KPK+ A  KA+ +  K  
Sbjct: 184  PHVERYFWTMVNQPNFRKILGEVKQTESVPPVQKPSQQKEPAKPKEPAIPKAKEEPKKET 243

Query: 727  -----------FGDS---------------------LHNWKVLYRNTRKI*FERASKGFW 644
                        G++                     L  WK LY NT+    E A KGFW
Sbjct: 244  KKESAKPKAEEAGEAEEAPKPKPKNPLDLLPPSKMILDEWKRLYSNTKTNFREVAIKGFW 303

Query: 643  DMYNPNEYSLWLCSCRKNVESNALIQTLKDLGGLMRRTRLDRKDLFGQMLFITSGEDFIV 464
            +MY+P  YSLW C  + N E+     TL  +GG ++R  L RK  FG+ML I SG  F V
Sbjct: 304  EMYDPEGYSLWFCDYKYNDENTVSFVTLNKVGGFLQRMDLARKYAFGKMLVIGSGPPFKV 363

Query: 463  NGFWLFRGPVRPQLLVDDEHYKE-FKWIPYN-NHDGQKNLVNQIIESHE 323
             G WLFRG   PQ ++D+ +  E ++W   +   + QK   +Q+IE +E
Sbjct: 364  KGLWLFRGQEIPQFVIDECYDMELYEWKKVDITDEEQKERASQMIEDYE 412


>ref|XP_002278756.2| PREDICTED: elongation factor 1-gamma-like [Vitis vinifera]
          Length = 424

 Score =  246 bits (628), Expect = 1e-62
 Identities = 157/407 (38%), Positives = 219/407 (53%), Gaps = 63/407 (15%)
 Frame = -1

Query: 1354 VLHTRDHDTNAYKVLIAAKYADIYVKHVKYSED------------------PVLKTPDGA 1229
            VLH  + + NA+K LIAA+Y+ + V+ VK  E                   PVL+TPDG 
Sbjct: 4    VLHAGNTNKNAFKALIAAEYSGVKVELVKNFEMGVSNKSPEFLKMNPIGKVPVLETPDGP 63

Query: 1228 ISESNAIVRYVARLEKTDSLYNSSQRE--EIEKWIDFSTFEICANIRRRWLSSCGF--YI 1061
            + ESNAI RYV RL+  + LY S+  E   IE+WIDF + EI ANI R ++   GF  Y+
Sbjct: 64   VFESNAIARYVTRLKADNPLYGSTLIEYAHIEQWIDFGSLEIDANILRWFIPRIGFAVYL 123

Query: 1060 RPDVEHFLGSLESSLWVLNEHLDSKSFLVGQSETLADIIITCDLLFGINKGMTNSFMCEF 881
             P  E  + +L+ +L  LN HL S ++LVG S TLADII+TC+L+ G ++ MT SF  EF
Sbjct: 124  PPAEEAAISALKRALGALNTHLASNTYLVGHSVTLADIIMTCNLVMGFSRVMTKSFTSEF 183

Query: 880  CHINSYFWEMIDLPNFRKVLGD-------SVLEKRFRFSRPWKP--KDSAKQKARIDTLK 728
             H+  YFW M++ PNFRK+LG+         ++   + S+P +P  KD  K++A+ +  K
Sbjct: 184  PHVERYFWTMVNQPNFRKILGEVKQAESVPPVQSAKKPSQPKEPKHKDEPKKEAKKEAKK 243

Query: 727  FGDS------------------------------LHNWKVLYRNTRKI*FERASKGFWDM 638
                                              L +WK LY NT+    E A KGFWDM
Sbjct: 244  EPVKPKVAEAAEEEEAPKPKPKNPLDLLPPSKMVLDDWKRLYSNTKTNFREVAIKGFWDM 303

Query: 637  YNPNEYSLWLCSCRKNVESNALIQTLKDLGGLMRRTRLDRKDLFGQMLFITSGEDFIVNG 458
            Y+P  YSLW C  + N E+     TL  + G ++R  L RK  FG+ML + S   F V G
Sbjct: 304  YDPEGYSLWFCDYKYNDENTVSFVTLNKVTGFLQRMDLARKYAFGKMLIVGSEAPFKVKG 363

Query: 457  FWLFRGPVRPQLLVDDEHYKE-FKWIPYN-NHDGQKNLVNQIIESHE 323
             WLFRG   PQ ++D+ +  E ++W   + + + QK  VNQ+IE  E
Sbjct: 364  LWLFRGQEIPQFVIDECYDMELYEWKKVDLSDEAQKERVNQMIEDQE 410


>ref|XP_002264400.1| PREDICTED: elongation factor 1-gamma-like [Vitis vinifera]
          Length = 423

 Score =  243 bits (620), Expect = 1e-61
 Identities = 159/406 (39%), Positives = 212/406 (52%), Gaps = 62/406 (15%)
 Frame = -1

Query: 1354 VLHTRDHDTNAYKVLIAAKYADIYVKHVKYSED------------------PVLKTPDGA 1229
            VLH    + NAYK LIAA+Y+ I V+ V+  E                   PVL+TPDG 
Sbjct: 4    VLHAGKTNKNAYKTLIAAEYSGIKVELVQNFEMGVSNKTPEFLKMNPIGKVPVLETPDGP 63

Query: 1228 ISESNAIVRYVARLEKTDSLYNSSQRE--EIEKWIDFSTFEICANIRRRWLSSCG--FYI 1061
            + ESNAI RYV RL+  + LY SS  E   IE+WIDF++ EI ANI   +    G   Y+
Sbjct: 64   VFESNAIARYVTRLKADNPLYGSSPIEYGHIEQWIDFASLEIDANIGHWFRPRIGRAVYL 123

Query: 1060 RPDVEHFLGSLESSLWVLNEHLDSKSFLVGQSETLADIIITCDLLFGINKGMTNSFMCEF 881
             P  E  + +L+ +L  LN HL S +FLVG S TLADI++TC+L  G +K MT SF  EF
Sbjct: 124  PPFEEAAIAALKRALGALNTHLASNTFLVGHSVTLADIVMTCNLYMGFSKLMTKSFTSEF 183

Query: 880  CHINSYFWEMIDLPNFRKVLGD----SVLEKRFRFSRPWKPKDSAKQKARIDTLK----- 728
             H+  YFW M++ PNF K+LG+    + +       +P  PK+ AK K + +  K     
Sbjct: 184  PHVERYFWTMVNQPNFSKILGEVKQTASVPPVSSAKKPALPKEHAKPKHKDEPKKEVKKE 243

Query: 727  --------FGDS---------------------LHNWKVLYRNTRKI*FERASKGFWDMY 635
                     G+                      L  WK LY NT+    E A KGFWDMY
Sbjct: 244  PAKPKEAPVGEEEEAPKPKPKNPLDLLPPSKMILDEWKRLYSNTKTNFREVAIKGFWDMY 303

Query: 634  NPNEYSLWLCSCRKNVESNALIQTLKDLGGLMRRTRLDRKDLFGQMLFITSGEDFIVNGF 455
            +P  YSLW C  + N E+     TL  +GG ++R  L RK  FG+ML I S   F V G 
Sbjct: 304  DPEGYSLWFCDYKYNDENTVSFVTLNKVGGFLQRMDLARKYAFGKMLVIGSEAPFKVKGL 363

Query: 454  WLFRGPVRPQLLVDDEHYKE-FKWIPYN-NHDGQKNLVNQIIESHE 323
            WLFRG   PQ ++D+ +  E ++W   + + + QK  VNQ+IE  E
Sbjct: 364  WLFRGQEIPQFIIDECYDMELYEWKKVDISDEAQKERVNQMIEDQE 409


>emb|CAN75785.1| hypothetical protein VITISV_021574 [Vitis vinifera]
          Length = 423

 Score =  241 bits (615), Expect = 4e-61
 Identities = 156/406 (38%), Positives = 210/406 (51%), Gaps = 62/406 (15%)
 Frame = -1

Query: 1354 VLHTRDHDTNAYKVLIAAKYADI------------------YVKHVKYSEDPVLKTPDGA 1229
            VLH    + NAYK LIAA+Y+ I                  ++K     + PVL+TPDG 
Sbjct: 4    VLHAGKTNKNAYKTLIAAEYSGIKVELXQNFEMGVSNKTPEFLKMNPIGKVPVLETPDGP 63

Query: 1228 ISESNAIVRYVARLEKTDSLYNSSQRE--EIEKWIDFSTFEICANIRRRWLSSCG--FYI 1061
            + ESNAI RYV RL+  + LY SS  E   IE+WIDF++ EI ANI   +    G   Y+
Sbjct: 64   VFESNAIARYVTRLKADNPLYGSSPIEYGHIEQWIDFASLEIDANIGHWFRPRMGRAVYL 123

Query: 1060 RPDVEHFLGSLESSLWVLNEHLDSKSFLVGQSETLADIIITCDLLFGINKGMTNSFMCEF 881
             P  E  + +L+ +L  LN HL S +FLVG S TLADI++TC+L  G +K MT SF  EF
Sbjct: 124  PPFEEAAIAALKRALGALNTHLASNTFLVGHSVTLADIVMTCNLYMGFSKLMTKSFTSEF 183

Query: 880  CHINSYFWEMIDLPNFRKVLGD----SVLEKRFRFSRPWKPKDSAKQKARIDTLK----- 728
             H+  YFW M++ PNF K+LG+    + +       +P  PK+  K K + +  K     
Sbjct: 184  PHVERYFWTMVNQPNFSKILGEVKQTASVPPVSSAKKPALPKEHVKPKHKDEPKKEVKKE 243

Query: 727  --------FGDS---------------------LHNWKVLYRNTRKI*FERASKGFWDMY 635
                     G+                      L  WK LY NT+    E A KGFWDMY
Sbjct: 244  PAKPKEAPVGEEEEAPKPKPKNPLDLLPPSKMILDEWKRLYSNTKTNFHEVAIKGFWDMY 303

Query: 634  NPNEYSLWLCSCRKNVESNALIQTLKDLGGLMRRTRLDRKDLFGQMLFITSGEDFIVNGF 455
            +P  YSLW C  + N E+     TL  +GG ++R  L RK  FG+ML I S   F V G 
Sbjct: 304  DPEGYSLWFCDYKYNDENTVSFVTLNKVGGFLQRMDLARKYAFGKMLVIGSEAPFKVKGL 363

Query: 454  WLFRGPVRPQLLVDDEHYKE-FKWIPYN-NHDGQKNLVNQIIESHE 323
            WLFRG   PQ ++D+ +  E ++W   + + + QK  VNQ+IE  E
Sbjct: 364  WLFRGQEIPQFIIDECYDMELYEWKKVDISDEAQKERVNQMIEDQE 409


>gb|AFW71313.1| hypothetical protein ZEAMMB73_547198 [Zea mays]
          Length = 414

 Score =  241 bits (614), Expect = 5e-61
 Identities = 152/397 (38%), Positives = 213/397 (53%), Gaps = 53/397 (13%)
 Frame = -1

Query: 1354 VLHTRDHDTNAYKVLIAAKYADIYVKHVK------------------YSEDPVLKTPDGA 1229
            VLH    + NA+K LIAA Y+ I V+ VK                    + PVL+TPDG 
Sbjct: 4    VLHAGSSNKNAFKTLIAADYSGIKVELVKDFQMGVSNKTPEFLKMNPIGKVPVLETPDGP 63

Query: 1228 ISESNAIVRYVARLEKTDSLYNSSQRE--EIEKWIDFSTFEICANIRRRWLSSCGFYIRP 1055
            + ESNAI RYV RL+  + LY SS  +   IE+W+DF+  E+ A+I +      GFY   
Sbjct: 64   VFESNAIARYVTRLKANNPLYGSSLIDYAHIEQWMDFAATEVDASIGKWLYPRMGFYPYA 123

Query: 1054 DV--EHFLGSLESSLWVLNEHLDSKSFLVGQSETLADIIITCDLLFGINKGMTNSFMCEF 881
             V  E  + +L+ +   LN HL S +FLVG S TLADI++TC+L  G ++ +T SF  EF
Sbjct: 124  AVTEESAIAALKRAFGSLNTHLASNTFLVGHSVTLADIVLTCNLYMGFSRILTKSFTSEF 183

Query: 880  CHINSYFWEMIDLPNFRKVLGD-------SVLEKRFRFSRPWKPKDSAKQ---------- 752
             HI  YFW M++ PNF+KV+GD        +L K+   ++  KPK++ K+          
Sbjct: 184  PHIERYFWTMVNQPNFKKVIGDVKQAEAVPLLPKKIAPAKEQKPKEAKKEAPKPKEAEKP 243

Query: 751  -----------KARIDTLKFGDS-LHNWKVLYRNTRKI*FERASKGFWDMYNPNEYSLWL 608
                       K  +D L      L +WK LY NT+    E A KGFWDMY+P  YSLW 
Sbjct: 244  AEEEEAPKPKPKNPLDLLPPSKLILDDWKRLYSNTKTNFREVAIKGFWDMYDPEGYSLWF 303

Query: 607  CSCRKNVESNALIQTLKDLGGLMRRTRLDRKDLFGQMLFITSGEDFIVNGFWLFRGPVRP 428
            C  + N E+     T+  +GG ++R  L RK  FG+ML + S   F V G WLFRGP  P
Sbjct: 304  CDYKYNDENTVSFVTMNKVGGFLQRMDLCRKYAFGKMLVVGSEPPFKVKGLWLFRGPEIP 363

Query: 427  QLLVDDEHYKE-FKWIPYN-NHDGQKNLVNQIIESHE 323
            + ++D+ +  E ++W   + + + QK  VN +IE  E
Sbjct: 364  KFVMDEVYDMELYEWTKVDLSDEAQKERVNAMIEDQE 400


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