BLASTX nr result

ID: Coptis23_contig00017057 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00017057
         (754 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279421.1| PREDICTED: uncharacterized protein LOC100244...   135   3e-39
ref|XP_002318705.1| predicted protein [Populus trichocarpa] gi|2...   120   2e-33
ref|XP_002511226.1| conserved hypothetical protein [Ricinus comm...   127   3e-32
ref|XP_002322230.1| predicted protein [Populus trichocarpa] gi|2...   117   1e-29
ref|XP_003549841.1| PREDICTED: uncharacterized protein LOC100812...   113   5e-28

>ref|XP_002279421.1| PREDICTED: uncharacterized protein LOC100244084 [Vitis vinifera]
          Length = 289

 Score =  135 bits (341), Expect(2) = 3e-39
 Identities = 71/138 (51%), Positives = 84/138 (60%)
 Frame = -3

Query: 491 DEEKKIHLEKDTCPGFISDGCNRVRWTNEAYGKMLNQDRLEGEARPEIVWLVMKEXXXXX 312
           DEEK  +L++DTCPGF+SDG NRV WTN AY +M+      G   P    +V        
Sbjct: 184 DEEKINNLDRDTCPGFVSDGLNRVTWTNAAYRRMV------GHVTPGPEMMV-------- 229

Query: 311 XXXXXXXXXXXXXXXXXXWLVMKERVPDNYTAFACRVRLQYTCRKERITLTVPCDVWKME 132
                             WLVMK RVP  + A  CRVRLQY C KE+ +LT+PCDVW+M+
Sbjct: 230 ------------------WLVMKARVPVTFPAITCRVRLQYRCGKEKNSLTLPCDVWRMD 271

Query: 131 GGGFAWRLDVKAALSLGR 78
           GGGFAWRLDVKAALSLGR
Sbjct: 272 GGGFAWRLDVKAALSLGR 289



 Score = 52.8 bits (125), Expect(2) = 3e-39
 Identities = 27/44 (61%), Positives = 34/44 (77%), Gaps = 1/44 (2%)
 Frame = -2

Query: 714 RAVSSNLRVLTPRPVRPVGSCVIVECLTDTCTE-EMLGSTDEEK 586
           RAV ++  V+ P+PVR VGSCV VEC+TDT  + + LGSTDEEK
Sbjct: 144 RAVITDRTVVMPQPVRLVGSCVTVECVTDTWVDGDWLGSTDEEK 187


>ref|XP_002318705.1| predicted protein [Populus trichocarpa] gi|222859378|gb|EEE96925.1|
           predicted protein [Populus trichocarpa]
          Length = 320

 Score =  120 bits (302), Expect(2) = 2e-33
 Identities = 73/151 (48%), Positives = 87/151 (57%), Gaps = 13/151 (8%)
 Frame = -3

Query: 491 DEEKKIHLEKDTCPGFISDGCNRVRWTNEAYGKMLNQDRLEGEARPEIVWLVMKEXXXXX 312
           D+EKKI++EKDTCPGFISDG  RV W NEAY KM+ Q    GE     V++         
Sbjct: 201 DDEKKINMEKDTCPGFISDGYGRVTWENEAYRKMVGQ----GEGGDHQVFV--------- 247

Query: 311 XXXXXXXXXXXXXXXXXXWLVMKERVPDNYT-----AFACRVRLQY----TCR---KERI 168
                             WL MKE+VP   T     AF CRV++QY    TCR   KE+I
Sbjct: 248 ------------------WLAMKEKVPMKVTIAGHKAFTCRVKVQYQKHDTCRVNGKEKI 289

Query: 167 TL-TVPCDVWKMEGGGFAWRLDVKAALSLGR 78
           ++ TVPCDVW+M+ G FAWRLDVK AL LGR
Sbjct: 290 SIVTVPCDVWRMDSGCFAWRLDVKTALCLGR 320



 Score = 47.8 bits (112), Expect(2) = 2e-33
 Identities = 25/45 (55%), Positives = 33/45 (73%), Gaps = 1/45 (2%)
 Frame = -2

Query: 708 VSSNLRVLTPRPVRPVGSCVIVECLTDTCTE-EMLGSTDEEKKIH 577
           VS++  V+ PR V  VGSCV VEC+TDT  + + LG TD+EKKI+
Sbjct: 163 VSADQTVVMPRVVNIVGSCVTVECVTDTWVDLDGLGRTDDEKKIN 207


>ref|XP_002511226.1| conserved hypothetical protein [Ricinus communis]
           gi|223550341|gb|EEF51828.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 303

 Score =  127 bits (319), Expect(2) = 3e-32
 Identities = 74/143 (51%), Positives = 88/143 (61%), Gaps = 6/143 (4%)
 Frame = -3

Query: 491 DEEKKIHLEKDTCPGFISDGCNRVRWTNEAYGKMLNQ--DRLEGEARPEIVWLVMKEXXX 318
           DEEK+++LE+DTCPGFISDG  RV WTNEAY KM  Q  D   GE    +VWLVMK+   
Sbjct: 185 DEEKRMNLERDTCPGFISDGFGRVTWTNEAYKKMAGQGEDWRRGEV---VVWLVMKDKV- 240

Query: 317 XXXXXXXXXXXXXXXXXXXXWLVMKERVPDNYTAFACRVRL--QYTCR--KERITLTVPC 150
                                 VM+     N  A+ C+VR+  Q TCR  KER ++TVPC
Sbjct: 241 ---------------------TVMEAERVGNNRAWTCKVRVQNQSTCRNVKERRSITVPC 279

Query: 149 DVWKMEGGGFAWRLDVKAALSLG 81
           DVW+M+ GGFAWRLDVKAALSLG
Sbjct: 280 DVWRMDSGGFAWRLDVKAALSLG 302



 Score = 37.7 bits (86), Expect(2) = 3e-32
 Identities = 23/53 (43%), Positives = 33/53 (62%), Gaps = 2/53 (3%)
 Frame = -2

Query: 729 TPIWQRAVSSNLRVLTPRPVRPV-GSCVIVECLTDTCTE-EMLGSTDEEKKIH 577
           T ++  +V     V  P+ +R V GSCV VEC+TDT    + LG TDEEK+++
Sbjct: 139 TMLFGMSVDHQNVVTHPQIMRVVMGSCVTVECITDTWVNLDGLGGTDEEKRMN 191


>ref|XP_002322230.1| predicted protein [Populus trichocarpa] gi|222869226|gb|EEF06357.1|
           predicted protein [Populus trichocarpa]
          Length = 326

 Score =  117 bits (292), Expect(2) = 1e-29
 Identities = 66/146 (45%), Positives = 80/146 (54%), Gaps = 8/146 (5%)
 Frame = -3

Query: 491 DEEKKIHLEKDTCPGFISDGCNRVRWTNEAYGKMLNQDRLEGEARPEIVWLVMKEXXXXX 312
           D+EK+++LEKDTCPGFISDG  RV WTNEAY KM+ Q   EG      VWL +KE     
Sbjct: 207 DKEKRVNLEKDTCPGFISDGYGRVTWTNEAYRKMVGQG--EGGDHQVFVWLAIKEKAPVT 264

Query: 311 XXXXXXXXXXXXXXXXXXWLVMKERVPDNYTAFACRVRLQYTC--------RKERITLTV 156
                                        + AF CRVR+QY          +++   +TV
Sbjct: 265 VALG------------------------GHQAFTCRVRVQYQKYNTSEVDGKEKSSIITV 300

Query: 155 PCDVWKMEGGGFAWRLDVKAALSLGR 78
           PCDVW+M+ GGFAWRLDVKAAL LGR
Sbjct: 301 PCDVWRMDTGGFAWRLDVKAALCLGR 326



 Score = 38.9 bits (89), Expect(2) = 1e-29
 Identities = 19/45 (42%), Positives = 31/45 (68%), Gaps = 1/45 (2%)
 Frame = -2

Query: 708 VSSNLRVLTPRPVRPVGSCVIVECLTDTCTE-EMLGSTDEEKKIH 577
           V ++  V+ P  +  VGSCV +EC+TDT  + + LG TD+EK+++
Sbjct: 169 VPADRTVVMPGVMNIVGSCVTLECVTDTWVDVDGLGRTDKEKRVN 213


>ref|XP_003549841.1| PREDICTED: uncharacterized protein LOC100812834 [Glycine max]
          Length = 290

 Score =  113 bits (282), Expect(2) = 5e-28
 Identities = 66/137 (48%), Positives = 81/137 (59%), Gaps = 1/137 (0%)
 Frame = -3

Query: 491 DEEKKIHLEKDTCPGFISDGCNRVRWTNEAYGKMLNQDRLEGEARPEIVWLVMKEXXXXX 312
           DEE++++L  DTCPGFISDG  RV WTNEAYGKM+   + EG+     V LV K      
Sbjct: 180 DEERRLNLSNDTCPGFISDGYGRVTWTNEAYGKMMMM-KGEGDEGQGPVLLVNK------ 232

Query: 311 XXXXXXXXXXXXXXXXXXWLVMKERVPDNYTAFACRVRL-QYTCRKERITLTVPCDVWKM 135
                                +   VP  + +F C VR+ QY+C KER +LTVPCDVW+M
Sbjct: 233 ---------------------VNTVVP--HASFTCLVRVVQYSCGKERNSLTVPCDVWRM 269

Query: 134 EGGGFAWRLDVKAALSL 84
           + GGFAWRLDVK ALSL
Sbjct: 270 DCGGFAWRLDVKTALSL 286



 Score = 37.7 bits (86), Expect(2) = 5e-28
 Identities = 18/28 (64%), Positives = 23/28 (82%), Gaps = 1/28 (3%)
 Frame = -2

Query: 657 SCVIVECLTDTCTE-EMLGSTDEEKKIH 577
           SCV VE +TDTC E E LGSTDEE++++
Sbjct: 159 SCVTVEGVTDTCLESEWLGSTDEERRLN 186


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