BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00017055
         (782 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004146390.1| PREDICTED: anaphase-promoting complex subuni...   387   e-105
ref|XP_002283201.1| PREDICTED: anaphase-promoting complex subuni...   386   e-105
ref|XP_002887756.1| cell division cycle family protein [Arabidop...   380   e-103
gb|AAC83033.1| Similar to CDC16 protein gb|U18291 (CDC16Hs) from...   374   e-101
ref|NP_565188.1| anaphase-promoting complex subunit 6 [Arabidops...   374   e-101

>ref|XP_004146390.1| PREDICTED: anaphase-promoting complex subunit 6-like [Cucumis
           sativus]
          Length = 547

 Score =  387 bits (995), Expect = e-105
 Identities = 176/220 (80%), Positives = 202/220 (91%)
 Frame = +3

Query: 3   YYYCIKKYGESRRFFSKATTLDGTFLPAWIGHGNAFAAQEEGDQAMSSFRTAARSFPGCH 182
           YYYCIKKY +SRR+FSKATTLDGTF PAWIG+GNA+AAQEEGDQAMS++RT AR FPGCH
Sbjct: 322 YYYCIKKYDQSRRYFSKATTLDGTFAPAWIGYGNAYAAQEEGDQAMSAYRTGARLFPGCH 381

Query: 183 LPTLYIGMEYMRTHNLKLAEKFFMQAKAICPSDPLVYNELGVVAYHMKDYKSAVWWFEKT 362
           LPTLYIGMEYMRTH+ KLAE+FF+QAK ICPSDPLVYNELGVVAY MK+Y  A WWFEKT
Sbjct: 382 LPTLYIGMEYMRTHSFKLAEQFFVQAKTICPSDPLVYNELGVVAYDMKEYNKAAWWFEKT 441

Query: 363 LSRVPSPLSEIWEPTVVNLAHAMRKLRKYHEAVSYYEKSLAISTRSLSTYAGLAYTYHLQ 542
           L+ +PSPLSE+WEPTVVNLAH+ RKL+ Y EA+ YYEK+LA+STRSLSTYAGLAYT HLQ
Sbjct: 442 LACIPSPLSEMWEPTVVNLAHSYRKLKMYREAIKYYEKALALSTRSLSTYAGLAYTCHLQ 501

Query: 543 DNYDAAITYYHKALWLKPDDQFCTDMLTVALVDECRSGSD 662
           D++ AAITYYHKALWLKPDDQFCT+ML++AL+DEC++G D
Sbjct: 502 DHFTAAITYYHKALWLKPDDQFCTEMLSLALMDECQNGMD 541


>ref|XP_002283201.1| PREDICTED: anaphase-promoting complex subunit 6 [Vitis vinifera]
           gi|302142883|emb|CBI20178.3| unnamed protein product
           [Vitis vinifera]
          Length = 545

 Score =  386 bits (991), Expect = e-105
 Identities = 180/225 (80%), Positives = 201/225 (89%)
 Frame = +3

Query: 3   YYYCIKKYGESRRFFSKATTLDGTFLPAWIGHGNAFAAQEEGDQAMSSFRTAARSFPGCH 182
           YYYCIKKY +SRR+FSKA  LDGTF PA IG GNA+AAQEEGDQAM ++RTAAR FPGCH
Sbjct: 320 YYYCIKKYDQSRRYFSKAANLDGTFPPALIGCGNAYAAQEEGDQAMLAYRTAARLFPGCH 379

Query: 183 LPTLYIGMEYMRTHNLKLAEKFFMQAKAICPSDPLVYNELGVVAYHMKDYKSAVWWFEKT 362
           LPTLYIGMEYMRTH+ KLAE+FFMQAK ICPSDPLVYNELGVVAY MK+Y  AVWWF+KT
Sbjct: 380 LPTLYIGMEYMRTHSFKLAEQFFMQAKTICPSDPLVYNELGVVAYDMKEYNKAVWWFQKT 439

Query: 363 LSRVPSPLSEIWEPTVVNLAHAMRKLRKYHEAVSYYEKSLAISTRSLSTYAGLAYTYHLQ 542
           LS +PS LSE+WEPT+VNLAHA RKL+ YHEA+S+YEK+L +STRSLSTYAGLAYTYHLQ
Sbjct: 440 LSHIPSSLSEMWEPTIVNLAHAYRKLKMYHEAISFYEKALTLSTRSLSTYAGLAYTYHLQ 499

Query: 543 DNYDAAITYYHKALWLKPDDQFCTDMLTVALVDECRSGSDHRDGS 677
           DN+ AAITYYHKALWLKPDDQFCT+MLT+ALVDE R G D R+ S
Sbjct: 500 DNFPAAITYYHKALWLKPDDQFCTEMLTLALVDEARRGLDPRNES 544


>ref|XP_002887756.1| cell division cycle family protein [Arabidopsis lyrata subsp.
           lyrata] gi|297333597|gb|EFH64015.1| cell division cycle
           family protein [Arabidopsis lyrata subsp. lyrata]
          Length = 543

 Score =  380 bits (976), Expect = e-103
 Identities = 174/220 (79%), Positives = 201/220 (91%)
 Frame = +3

Query: 3   YYYCIKKYGESRRFFSKATTLDGTFLPAWIGHGNAFAAQEEGDQAMSSFRTAARSFPGCH 182
           YYYCIKKY E+RR+FSKAT++DG+F PAWIG+GN+FAAQEEGDQAMS++RTAAR FPGCH
Sbjct: 318 YYYCIKKYAEARRYFSKATSIDGSFSPAWIGYGNSFAAQEEGDQAMSAYRTAARLFPGCH 377

Query: 183 LPTLYIGMEYMRTHNLKLAEKFFMQAKAICPSDPLVYNELGVVAYHMKDYKSAVWWFEKT 362
           LPTLYIGMEYMRTH+ KLA++FFMQAKAICPSDPLVYNELGVVAYHMK+Y  AV WFEKT
Sbjct: 378 LPTLYIGMEYMRTHSYKLADQFFMQAKAICPSDPLVYNELGVVAYHMKEYGKAVRWFEKT 437

Query: 363 LSRVPSPLSEIWEPTVVNLAHAMRKLRKYHEAVSYYEKSLAISTRSLSTYAGLAYTYHLQ 542
           LS +PS L+E WEPTVVNLAHA RKLRK  EA+SYYE++L +ST+SLSTY+GL YTYHLQ
Sbjct: 438 LSHIPSVLTETWEPTVVNLAHAYRKLRKDREAISYYERALTLSTKSLSTYSGLGYTYHLQ 497

Query: 543 DNYDAAITYYHKALWLKPDDQFCTDMLTVALVDECRSGSD 662
            N+ AAI+YYHKALWLKPDDQFCT+ML VAL+DEC++G D
Sbjct: 498 GNFSAAISYYHKALWLKPDDQFCTEMLNVALMDECQNGVD 537


>gb|AAC83033.1| Similar to CDC16 protein gb|U18291 (CDC16Hs) from Homo sapiens
           [Arabidopsis thaliana]
          Length = 521

 Score =  374 bits (961), Expect = e-101
 Identities = 173/222 (77%), Positives = 201/222 (90%)
 Frame = +3

Query: 3   YYYCIKKYGESRRFFSKATTLDGTFLPAWIGHGNAFAAQEEGDQAMSSFRTAARSFPGCH 182
           YYYCIKKY E+RR+FSKAT +DG+F PA IG+GN+FAAQEEGDQAMS++RTAAR FPGCH
Sbjct: 296 YYYCIKKYAEARRYFSKATGIDGSFSPARIGYGNSFAAQEEGDQAMSAYRTAARLFPGCH 355

Query: 183 LPTLYIGMEYMRTHNLKLAEKFFMQAKAICPSDPLVYNELGVVAYHMKDYKSAVWWFEKT 362
           LPTLYIGMEYMRTH+ KLA++FFMQAKAICPSDPLVYNELGVVAYHMK+Y  AV WFEKT
Sbjct: 356 LPTLYIGMEYMRTHSYKLADQFFMQAKAICPSDPLVYNELGVVAYHMKEYGKAVRWFEKT 415

Query: 363 LSRVPSPLSEIWEPTVVNLAHAMRKLRKYHEAVSYYEKSLAISTRSLSTYAGLAYTYHLQ 542
           L+ +PS L+E WEPTVVNLAHA RKLRK  EA+SYYE++L +ST+SLSTY+GLAYTYHLQ
Sbjct: 416 LAHIPSALTESWEPTVVNLAHAYRKLRKDREAISYYERALTLSTKSLSTYSGLAYTYHLQ 475

Query: 543 DNYDAAITYYHKALWLKPDDQFCTDMLTVALVDECRSGSDHR 668
            N+ AAI+YYHKALWLKPDDQFCT+ML VAL+DEC++G D +
Sbjct: 476 GNFSAAISYYHKALWLKPDDQFCTEMLNVALMDECQNGVDSK 517


>ref|NP_565188.1| anaphase-promoting complex subunit 6 [Arabidopsis thaliana]
           gi|302595634|sp|B3DNN5.1|CDC16_ARATH RecName:
           Full=Anaphase-promoting complex subunit 6; AltName:
           Full=Cell division cycle protein 16 homolog; Short=CDC16
           homolog; AltName: Full=Cyclosome subunit 6; AltName:
           Full=Protein NOMEGA gi|190016006|gb|ACE62891.1|
           At1g78770 [Arabidopsis thaliana]
           gi|332198027|gb|AEE36148.1| anaphase-promoting complex
           subunit 6 [Arabidopsis thaliana]
          Length = 543

 Score =  374 bits (961), Expect = e-101
 Identities = 173/222 (77%), Positives = 201/222 (90%)
 Frame = +3

Query: 3   YYYCIKKYGESRRFFSKATTLDGTFLPAWIGHGNAFAAQEEGDQAMSSFRTAARSFPGCH 182
           YYYCIKKY E+RR+FSKAT +DG+F PA IG+GN+FAAQEEGDQAMS++RTAAR FPGCH
Sbjct: 318 YYYCIKKYAEARRYFSKATGIDGSFSPARIGYGNSFAAQEEGDQAMSAYRTAARLFPGCH 377

Query: 183 LPTLYIGMEYMRTHNLKLAEKFFMQAKAICPSDPLVYNELGVVAYHMKDYKSAVWWFEKT 362
           LPTLYIGMEYMRTH+ KLA++FFMQAKAICPSDPLVYNELGVVAYHMK+Y  AV WFEKT
Sbjct: 378 LPTLYIGMEYMRTHSYKLADQFFMQAKAICPSDPLVYNELGVVAYHMKEYGKAVRWFEKT 437

Query: 363 LSRVPSPLSEIWEPTVVNLAHAMRKLRKYHEAVSYYEKSLAISTRSLSTYAGLAYTYHLQ 542
           L+ +PS L+E WEPTVVNLAHA RKLRK  EA+SYYE++L +ST+SLSTY+GLAYTYHLQ
Sbjct: 438 LAHIPSALTESWEPTVVNLAHAYRKLRKDREAISYYERALTLSTKSLSTYSGLAYTYHLQ 497

Query: 543 DNYDAAITYYHKALWLKPDDQFCTDMLTVALVDECRSGSDHR 668
            N+ AAI+YYHKALWLKPDDQFCT+ML VAL+DEC++G D +
Sbjct: 498 GNFSAAISYYHKALWLKPDDQFCTEMLNVALMDECQNGVDSK 539