BLASTX nr result

ID: Coptis23_contig00017038 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00017038
         (1297 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284556.1| PREDICTED: metal transporter Nramp5 [Vitis v...   549   e-154
ref|XP_002307453.1| nramp transporter [Populus trichocarpa] gi|2...   543   e-152
gb|AAU00158.1| root-specific metal transporter [Malus baccata]        537   e-150
ref|NP_001234318.1| root-specific metal transporter [Solanum lyc...   533   e-149
ref|XP_002307454.1| nramp transporter [Populus trichocarpa] gi|2...   532   e-149

>ref|XP_002284556.1| PREDICTED: metal transporter Nramp5 [Vitis vinifera]
            gi|302141782|emb|CBI18985.3| unnamed protein product
            [Vitis vinifera]
          Length = 542

 Score =  549 bits (1415), Expect = e-154
 Identities = 277/363 (76%), Positives = 307/363 (84%), Gaps = 3/363 (0%)
 Frame = -1

Query: 1297 KLELLIAILVFVMAGCYFGEMSYVKPPASDLLKGMFIPKLSGHGATGDAIALLGALVMPH 1118
            KLELLIA+LVF+MAGC+FGEMSYVKPPA+ +LKGMFIPKL G GATGDAIALLGALVMPH
Sbjct: 180  KLELLIAVLVFIMAGCFFGEMSYVKPPATGVLKGMFIPKLKGQGATGDAIALLGALVMPH 239

Query: 1117 NLFLHSALVLSRKIPSSVQGINSACKYFLIESGFALFVAFLINVAVIAVSGTVCSASDLS 938
            NLFLHSALVLSRK+P+SV+GIN AC+YFLIESG ALFVAFLINVAV++VSGTVCSA +LS
Sbjct: 240  NLFLHSALVLSRKVPNSVRGINEACRYFLIESGLALFVAFLINVAVVSVSGTVCSADNLS 299

Query: 937  KDDTQRCGDLTLNSASFLLQNVLGKSSSTFYAIALLASGQSSTITGTYAGQYIMQGFLDL 758
            +++  +C DL LNSASFLL+NVLG SS   YAIAL ASGQSSTITGTYAGQ+IMQGFLD+
Sbjct: 300  QENLDQCNDLNLNSASFLLKNVLGGSSKVVYAIALFASGQSSTITGTYAGQFIMQGFLDI 359

Query: 757  KMKTWMRNLMTRCIAITPXXXXXXXXXXXXXXXXXXXXSMILSFELPFALIPLLKFSSGA 578
            KM+ W+RNLMTR IAITP                    SMILSFELPFALIPLLKFSS  
Sbjct: 360  KMRKWLRNLMTRSIAITPSLIVSIIGGSAGAGRLIIIASMILSFELPFALIPLLKFSSSN 419

Query: 577  TKMGPHKNSIYVIVISWILGFLIIGINIYYLSTGFIDWLIHNNLPKVANVFIGIIVFPVM 398
            TKMGPHKNSIY+IVISWILGF IIGINIYYLST F+ WL+HNNLPKV NVFIGIIVFP+M
Sbjct: 420  TKMGPHKNSIYIIVISWILGFGIIGINIYYLSTSFVGWLLHNNLPKVGNVFIGIIVFPLM 479

Query: 397  AIYILSVLYLTLRKDKIVTYIDPSKLDPNAQNKMENGLDSADGV---DHVPYREDLADIP 227
            AIYILSV+YLT RKD +VT+I+P K DPN QN MENG D  DGV    HVPYREDLADIP
Sbjct: 480  AIYILSVIYLTTRKDTVVTFIEPEKNDPNVQNHMENGFDQTDGVFELGHVPYREDLADIP 539

Query: 226  LPR 218
            LP+
Sbjct: 540  LPK 542


>ref|XP_002307453.1| nramp transporter [Populus trichocarpa] gi|222856902|gb|EEE94449.1|
            nramp transporter [Populus trichocarpa]
          Length = 518

 Score =  543 bits (1400), Expect = e-152
 Identities = 277/362 (76%), Positives = 309/362 (85%), Gaps = 3/362 (0%)
 Frame = -1

Query: 1297 KLELLIAILVFVMAGCYFGEMSYVKPPASDLLKGMFIPKLSGHGATGDAIALLGALVMPH 1118
            KLELLIA+LVFVMA C+FGEMSYVKP A+D+LKGMFIPKLSG GATGDAIALLGAL+MPH
Sbjct: 156  KLELLIAVLVFVMAACFFGEMSYVKPSATDVLKGMFIPKLSGQGATGDAIALLGALIMPH 215

Query: 1117 NLFLHSALVLSRKIPSSVQGINSACKYFLIESGFALFVAFLINVAVIAVSGTVCSASDLS 938
            NLFLHSALVLSRK+P+SV+GIN AC+YFLIESGFALF+AFLIN+AVI+VSGTVCSA +LS
Sbjct: 216  NLFLHSALVLSRKMPNSVRGINDACRYFLIESGFALFIAFLINLAVISVSGTVCSAQNLS 275

Query: 937  KDDTQRCGDLTLNSASFLLQNVLGKSSSTFYAIALLASGQSSTITGTYAGQYIMQGFLDL 758
             ++  RCGDLTLNSASFLLQNVLGKSSS  YAIALLASGQSSTITGTYAGQYIMQGFL+L
Sbjct: 276  SENADRCGDLTLNSASFLLQNVLGKSSSKIYAIALLASGQSSTITGTYAGQYIMQGFLEL 335

Query: 757  KMKTWMRNLMTRCIAITPXXXXXXXXXXXXXXXXXXXXSMILSFELPFALIPLLKFSSGA 578
            KM+ W+RNL+TRCIAI P                    SMILSFELPFALIPLLKFSS  
Sbjct: 336  KMRKWIRNLVTRCIAIAPSLVVSIIGGSSGAGRLIIIASMILSFELPFALIPLLKFSSST 395

Query: 577  TKMGPHKNSIYVIVISWILGFLIIGINIYYLSTGFIDWLIHNNLPKVANVFIGIIVFPVM 398
            TKMGPHKNSIY+IVISWILG  IIG+NIYYLSTGF+ WLI NNLPKV NVFIGIIVFP+M
Sbjct: 396  TKMGPHKNSIYIIVISWILGLGIIGVNIYYLSTGFVGWLIDNNLPKVGNVFIGIIVFPLM 455

Query: 397  AIYILSVLYLTLRKDKIVTYIDPSKLDPNAQNKMENGL-DSADG--VDHVPYREDLADIP 227
            AIYIL+V+YLT RKD +VT++ P+K DP  Q  MENGL  S +G  ++ VPYREDLADIP
Sbjct: 456  AIYILAVIYLTFRKDSVVTFLGPNKNDPQQQANMENGLTKSTEGPEMERVPYREDLADIP 515

Query: 226  LP 221
            LP
Sbjct: 516  LP 517


>gb|AAU00158.1| root-specific metal transporter [Malus baccata]
          Length = 551

 Score =  537 bits (1383), Expect = e-150
 Identities = 270/360 (75%), Positives = 306/360 (85%)
 Frame = -1

Query: 1297 KLELLIAILVFVMAGCYFGEMSYVKPPASDLLKGMFIPKLSGHGATGDAIALLGALVMPH 1118
            KLE+LIA+LVFVMA C+FGEMSYVKPPAS +LKGMFIPKLSG GATGDAIALLGAL+MPH
Sbjct: 193  KLEMLIAVLVFVMAACFFGEMSYVKPPASGVLKGMFIPKLSGQGATGDAIALLGALIMPH 252

Query: 1117 NLFLHSALVLSRKIPSSVQGINSACKYFLIESGFALFVAFLINVAVIAVSGTVCSASDLS 938
            NLFLHSALVLSRKIP+SV+G+N AC+YFLIESGFALFVAFLINVA+I+VSGTVC  S+LS
Sbjct: 253  NLFLHSALVLSRKIPNSVRGMNDACRYFLIESGFALFVAFLINVAIISVSGTVCHQSNLS 312

Query: 937  KDDTQRCGDLTLNSASFLLQNVLGKSSSTFYAIALLASGQSSTITGTYAGQYIMQGFLDL 758
              +   C DLTLNSASFLLQNVLG+SS   YAIALLASGQSSTITGTYAGQ++MQGFLD+
Sbjct: 313  DKNNDTCSDLTLNSASFLLQNVLGRSSKILYAIALLASGQSSTITGTYAGQFVMQGFLDI 372

Query: 757  KMKTWMRNLMTRCIAITPXXXXXXXXXXXXXXXXXXXXSMILSFELPFALIPLLKFSSGA 578
            KMK W RNLMTRCIAITP                    SMILSFELPFALIPLLKFS  A
Sbjct: 373  KMKKWARNLMTRCIAITPSLIVSIIGGSSGAGRLIIIASMILSFELPFALIPLLKFSGSA 432

Query: 577  TKMGPHKNSIYVIVISWILGFLIIGINIYYLSTGFIDWLIHNNLPKVANVFIGIIVFPVM 398
            TKMGPHKNSIY+IVISWI+G  IIGINIYYLSTGF+ W+IH++LPKVA VFIGI+VFP+M
Sbjct: 433  TKMGPHKNSIYIIVISWIIGMAIIGINIYYLSTGFVGWIIHSSLPKVATVFIGILVFPIM 492

Query: 397  AIYILSVLYLTLRKDKIVTYIDPSKLDPNAQNKMENGLDSADGVDHVPYREDLADIPLPR 218
            AIYIL+VLYL LRKD +VT+++P+K DP AQN+MENGL +  G   VP+REDLAD+ LP+
Sbjct: 493  AIYILAVLYLALRKDSVVTFVEPTKNDPAAQNQMENGLPNY-GEPPVPFREDLADVSLPQ 551


>ref|NP_001234318.1| root-specific metal transporter [Solanum lycopersicum]
            gi|30267434|gb|AAP21818.1| root-specific metal
            transporter [Solanum lycopersicum]
          Length = 530

 Score =  533 bits (1372), Expect = e-149
 Identities = 274/360 (76%), Positives = 304/360 (84%)
 Frame = -1

Query: 1297 KLELLIAILVFVMAGCYFGEMSYVKPPASDLLKGMFIPKLSGHGATGDAIALLGALVMPH 1118
            KLELLIAILVFVMA C+FGEMSYVKPPA++L KGMFIPKL+G GAT DAIALLGALVMPH
Sbjct: 176  KLELLIAILVFVMAACFFGEMSYVKPPANELFKGMFIPKLNGDGATADAIALLGALVMPH 235

Query: 1117 NLFLHSALVLSRKIPSSVQGINSACKYFLIESGFALFVAFLINVAVIAVSGTVCSASDLS 938
            NLFLHSALVLSRKIP+SV+GIN ACK+FLIESGFALFV+FLINVAV++VSGTVC A +LS
Sbjct: 236  NLFLHSALVLSRKIPNSVRGINDACKFFLIESGFALFVSFLINVAVVSVSGTVCGADNLS 295

Query: 937  KDDTQRCGDLTLNSASFLLQNVLGKSSSTFYAIALLASGQSSTITGTYAGQYIMQGFLDL 758
              + + C D+TLNSASFLL+NVLGKSSST YAIALLASGQSSTITGTYAGQ+IMQGFLDL
Sbjct: 296  DQNKESCSDITLNSASFLLKNVLGKSSSTVYAIALLASGQSSTITGTYAGQFIMQGFLDL 355

Query: 757  KMKTWMRNLMTRCIAITPXXXXXXXXXXXXXXXXXXXXSMILSFELPFALIPLLKFSSGA 578
            KMKTW+RNL TR IAITP                    SMILSFELPFALIPLLKFSS +
Sbjct: 356  KMKTWLRNLFTRLIAITPSLVVSIIGGSSGAGRLIIIASMILSFELPFALIPLLKFSSSS 415

Query: 577  TKMGPHKNSIYVIVISWILGFLIIGINIYYLSTGFIDWLIHNNLPKVANVFIGIIVFPVM 398
            TK+GPHKNSIY+IVISWILG  IIGINIYYLST F+ WLI NNLPKV NV IGI+VFP+M
Sbjct: 416  TKLGPHKNSIYIIVISWILGLGIIGINIYYLSTAFVGWLISNNLPKVGNVLIGIVVFPLM 475

Query: 397  AIYILSVLYLTLRKDKIVTYIDPSKLDPNAQNKMENGLDSADGVDHVPYREDLADIPLPR 218
            AIYIL+V+YL  RKDK+VTYIDP K D      MENG++S + VD VPYREDLADIPLP+
Sbjct: 476  AIYILAVIYLMFRKDKVVTYIDPIKDD-----HMENGINSMELVDRVPYREDLADIPLPQ 530


>ref|XP_002307454.1| nramp transporter [Populus trichocarpa] gi|222856903|gb|EEE94450.1|
            nramp transporter [Populus trichocarpa]
          Length = 585

 Score =  532 bits (1371), Expect = e-149
 Identities = 275/365 (75%), Positives = 305/365 (83%), Gaps = 6/365 (1%)
 Frame = -1

Query: 1297 KLELLIAILVFVMAGCYFGEMSYVKPPASDLLKGMFIPKLSGHGATGDAIALLGALVMPH 1118
            KLELLIA+LVFVMA C+FGEMSYVKP A+D+LKGMFIPKLSG GATGDAIALLGAL+MPH
Sbjct: 220  KLELLIAVLVFVMAACFFGEMSYVKPSATDVLKGMFIPKLSGQGATGDAIALLGALIMPH 279

Query: 1117 NLFLHSALVLSRKIPSSVQGINSACKYFLIESGFALFVAFLINVAVIAVSGTVCSASDLS 938
            NLFLHSALVLSRK+P+SV+GIN AC YFLIESGFALF+AFLIN+AVI+VSGTVCSA +LS
Sbjct: 280  NLFLHSALVLSRKMPNSVRGINDACHYFLIESGFALFIAFLINLAVISVSGTVCSAQNLS 339

Query: 937  KDDTQRCGDLTLNSASFLLQNVLGKSSSTFYAIALLASGQSSTITGTYAGQYIMQGFLDL 758
             ++  RCGDLTLNSASFLLQNVLGKSSS  YAIALLASGQSSTITGTYAGQYIMQGFL+L
Sbjct: 340  SENADRCGDLTLNSASFLLQNVLGKSSSKIYAIALLASGQSSTITGTYAGQYIMQGFLEL 399

Query: 757  KMKTWMRNLMTRCIAITP---XXXXXXXXXXXXXXXXXXXXSMILSFELPFALIPLLKFS 587
            KM+ W+RNL+TRCIAI P                        MILSFELPFALIPLLKFS
Sbjct: 400  KMRKWIRNLVTRCIAIAPSLVVSIIGGSSGAGRLIIIASVLQMILSFELPFALIPLLKFS 459

Query: 586  SGATKMGPHKNSIYVIVISWILGFLIIGINIYYLSTGFIDWLIHNNLPKVANVFIGIIVF 407
            S  TKMGPHKNSIY+IVISWILG  IIGINIYYLSTGF+ WLI NNLPKV NVFI IIVF
Sbjct: 460  SSTTKMGPHKNSIYIIVISWILGLGIIGINIYYLSTGFVGWLIDNNLPKVGNVFIAIIVF 519

Query: 406  PVMAIYILSVLYLTLRKDKIVTYIDPSKLDPNAQNKMENGL-DSADG--VDHVPYREDLA 236
            P+MAIYIL+V+YLT RKD +VT++ P+K DP  Q  MENGL  S +G  ++ VPYR DLA
Sbjct: 520  PLMAIYILAVIYLTFRKDSVVTFLGPNKNDPQQQANMENGLTKSTEGPEMERVPYRGDLA 579

Query: 235  DIPLP 221
            DIPLP
Sbjct: 580  DIPLP 584


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