BLASTX nr result
ID: Coptis23_contig00017021
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis23_contig00017021 (474 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002322574.1| predicted protein [Populus trichocarpa] gi|2... 112 4e-23 ref|XP_004163970.1| PREDICTED: uncharacterized protein LOC101227... 111 5e-23 ref|XP_004136760.1| PREDICTED: uncharacterized protein LOC101209... 111 5e-23 ref|NP_850340.1| PQ loop repeat-containing protein [Arabidopsis ... 111 7e-23 ref|XP_002881756.1| PQ-loop repeat family protein [Arabidopsis l... 110 2e-22 >ref|XP_002322574.1| predicted protein [Populus trichocarpa] gi|222867204|gb|EEF04335.1| predicted protein [Populus trichocarpa] Length = 403 Score = 112 bits (279), Expect = 4e-23 Identities = 59/88 (67%), Positives = 70/88 (79%), Gaps = 1/88 (1%) Frame = +3 Query: 6 SRIREELPQGVVIRVGRKLLQDSATSVLRHGD-DVSSGIGTFFGWAMAIIYMGGRLPQIC 182 +R E QG VI+VGRK+LQ A+S + H + SGIGTF GW+MA IYMGGRLPQI Sbjct: 261 ARAFENKHQGFVIQVGRKILQ--ASSRMSHENYSEGSGIGTFLGWSMAAIYMGGRLPQIF 318 Query: 183 LNIKRGNVEGLSPLMFIFALVGNMTYVA 266 LNIKRGNVEGL+PLMF+FAL+GN+TYVA Sbjct: 319 LNIKRGNVEGLNPLMFVFALIGNITYVA 346 >ref|XP_004163970.1| PREDICTED: uncharacterized protein LOC101227133 [Cucumis sativus] Length = 420 Score = 111 bits (278), Expect = 5e-23 Identities = 55/79 (69%), Positives = 62/79 (78%) Frame = +3 Query: 30 QGVVIRVGRKLLQDSATSVLRHGDDVSSGIGTFFGWAMAIIYMGGRLPQICLNIKRGNVE 209 +G VI VGRKLLQ + + GIGT+ GWAMA+IYMGGRLPQICLNIKRG+VE Sbjct: 285 KGFVIPVGRKLLQVAGVLQNNVNEGGGGGIGTYLGWAMAVIYMGGRLPQICLNIKRGHVE 344 Query: 210 GLSPLMFIFALVGNMTYVA 266 GLSPLMFIFAL+GN TYVA Sbjct: 345 GLSPLMFIFALIGNSTYVA 363 >ref|XP_004136760.1| PREDICTED: uncharacterized protein LOC101209754 [Cucumis sativus] Length = 420 Score = 111 bits (278), Expect = 5e-23 Identities = 55/79 (69%), Positives = 62/79 (78%) Frame = +3 Query: 30 QGVVIRVGRKLLQDSATSVLRHGDDVSSGIGTFFGWAMAIIYMGGRLPQICLNIKRGNVE 209 +G VI VGRKLLQ + + GIGT+ GWAMA+IYMGGRLPQICLNIKRG+VE Sbjct: 285 KGFVIPVGRKLLQVAGVLQNNVNEGGGGGIGTYLGWAMAVIYMGGRLPQICLNIKRGHVE 344 Query: 210 GLSPLMFIFALVGNMTYVA 266 GLSPLMFIFAL+GN TYVA Sbjct: 345 GLSPLMFIFALIGNSTYVA 363 >ref|NP_850340.1| PQ loop repeat-containing protein [Arabidopsis thaliana] gi|19347739|gb|AAL86295.1| unknown protein [Arabidopsis thaliana] gi|22136728|gb|AAM91683.1| unknown protein [Arabidopsis thaliana] gi|330254825|gb|AEC09919.1| PQ loop repeat-containing protein [Arabidopsis thaliana] Length = 376 Score = 111 bits (277), Expect = 7e-23 Identities = 53/76 (69%), Positives = 62/76 (81%) Frame = +3 Query: 39 VIRVGRKLLQDSATSVLRHGDDVSSGIGTFFGWAMAIIYMGGRLPQICLNIKRGNVEGLS 218 V+R RKLLQ ++++V H SS IG F GWAMA IYMGGRLPQICLN++RG+VEGL+ Sbjct: 243 VVRAARKLLQVTSSNVAEHSGGESSRIGMFLGWAMAAIYMGGRLPQICLNMRRGHVEGLN 302 Query: 219 PLMFIFALVGNMTYVA 266 PLMF FALVGNMTYVA Sbjct: 303 PLMFFFALVGNMTYVA 318 >ref|XP_002881756.1| PQ-loop repeat family protein [Arabidopsis lyrata subsp. lyrata] gi|297327595|gb|EFH58015.1| PQ-loop repeat family protein [Arabidopsis lyrata subsp. lyrata] Length = 380 Score = 110 bits (274), Expect = 2e-22 Identities = 53/76 (69%), Positives = 62/76 (81%) Frame = +3 Query: 39 VIRVGRKLLQDSATSVLRHGDDVSSGIGTFFGWAMAIIYMGGRLPQICLNIKRGNVEGLS 218 V+R RKLLQ ++++V H SS IG F GWAMA IYMGGRLPQICLN++RG+VEGL+ Sbjct: 247 VVRAARKLLQVTSSNVGEHSGGESSRIGMFLGWAMAAIYMGGRLPQICLNMRRGHVEGLN 306 Query: 219 PLMFIFALVGNMTYVA 266 PLMF FALVGNMTYVA Sbjct: 307 PLMFFFALVGNMTYVA 322