BLASTX nr result

ID: Coptis23_contig00017021 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00017021
         (474 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002322574.1| predicted protein [Populus trichocarpa] gi|2...   112   4e-23
ref|XP_004163970.1| PREDICTED: uncharacterized protein LOC101227...   111   5e-23
ref|XP_004136760.1| PREDICTED: uncharacterized protein LOC101209...   111   5e-23
ref|NP_850340.1| PQ loop repeat-containing protein [Arabidopsis ...   111   7e-23
ref|XP_002881756.1| PQ-loop repeat family protein [Arabidopsis l...   110   2e-22

>ref|XP_002322574.1| predicted protein [Populus trichocarpa] gi|222867204|gb|EEF04335.1|
           predicted protein [Populus trichocarpa]
          Length = 403

 Score =  112 bits (279), Expect = 4e-23
 Identities = 59/88 (67%), Positives = 70/88 (79%), Gaps = 1/88 (1%)
 Frame = +3

Query: 6   SRIREELPQGVVIRVGRKLLQDSATSVLRHGD-DVSSGIGTFFGWAMAIIYMGGRLPQIC 182
           +R  E   QG VI+VGRK+LQ  A+S + H +    SGIGTF GW+MA IYMGGRLPQI 
Sbjct: 261 ARAFENKHQGFVIQVGRKILQ--ASSRMSHENYSEGSGIGTFLGWSMAAIYMGGRLPQIF 318

Query: 183 LNIKRGNVEGLSPLMFIFALVGNMTYVA 266
           LNIKRGNVEGL+PLMF+FAL+GN+TYVA
Sbjct: 319 LNIKRGNVEGLNPLMFVFALIGNITYVA 346


>ref|XP_004163970.1| PREDICTED: uncharacterized protein LOC101227133 [Cucumis sativus]
          Length = 420

 Score =  111 bits (278), Expect = 5e-23
 Identities = 55/79 (69%), Positives = 62/79 (78%)
 Frame = +3

Query: 30  QGVVIRVGRKLLQDSATSVLRHGDDVSSGIGTFFGWAMAIIYMGGRLPQICLNIKRGNVE 209
           +G VI VGRKLLQ +        +    GIGT+ GWAMA+IYMGGRLPQICLNIKRG+VE
Sbjct: 285 KGFVIPVGRKLLQVAGVLQNNVNEGGGGGIGTYLGWAMAVIYMGGRLPQICLNIKRGHVE 344

Query: 210 GLSPLMFIFALVGNMTYVA 266
           GLSPLMFIFAL+GN TYVA
Sbjct: 345 GLSPLMFIFALIGNSTYVA 363


>ref|XP_004136760.1| PREDICTED: uncharacterized protein LOC101209754 [Cucumis sativus]
          Length = 420

 Score =  111 bits (278), Expect = 5e-23
 Identities = 55/79 (69%), Positives = 62/79 (78%)
 Frame = +3

Query: 30  QGVVIRVGRKLLQDSATSVLRHGDDVSSGIGTFFGWAMAIIYMGGRLPQICLNIKRGNVE 209
           +G VI VGRKLLQ +        +    GIGT+ GWAMA+IYMGGRLPQICLNIKRG+VE
Sbjct: 285 KGFVIPVGRKLLQVAGVLQNNVNEGGGGGIGTYLGWAMAVIYMGGRLPQICLNIKRGHVE 344

Query: 210 GLSPLMFIFALVGNMTYVA 266
           GLSPLMFIFAL+GN TYVA
Sbjct: 345 GLSPLMFIFALIGNSTYVA 363


>ref|NP_850340.1| PQ loop repeat-containing protein [Arabidopsis thaliana]
           gi|19347739|gb|AAL86295.1| unknown protein [Arabidopsis
           thaliana] gi|22136728|gb|AAM91683.1| unknown protein
           [Arabidopsis thaliana] gi|330254825|gb|AEC09919.1| PQ
           loop repeat-containing protein [Arabidopsis thaliana]
          Length = 376

 Score =  111 bits (277), Expect = 7e-23
 Identities = 53/76 (69%), Positives = 62/76 (81%)
 Frame = +3

Query: 39  VIRVGRKLLQDSATSVLRHGDDVSSGIGTFFGWAMAIIYMGGRLPQICLNIKRGNVEGLS 218
           V+R  RKLLQ ++++V  H    SS IG F GWAMA IYMGGRLPQICLN++RG+VEGL+
Sbjct: 243 VVRAARKLLQVTSSNVAEHSGGESSRIGMFLGWAMAAIYMGGRLPQICLNMRRGHVEGLN 302

Query: 219 PLMFIFALVGNMTYVA 266
           PLMF FALVGNMTYVA
Sbjct: 303 PLMFFFALVGNMTYVA 318


>ref|XP_002881756.1| PQ-loop repeat family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297327595|gb|EFH58015.1| PQ-loop repeat family
           protein [Arabidopsis lyrata subsp. lyrata]
          Length = 380

 Score =  110 bits (274), Expect = 2e-22
 Identities = 53/76 (69%), Positives = 62/76 (81%)
 Frame = +3

Query: 39  VIRVGRKLLQDSATSVLRHGDDVSSGIGTFFGWAMAIIYMGGRLPQICLNIKRGNVEGLS 218
           V+R  RKLLQ ++++V  H    SS IG F GWAMA IYMGGRLPQICLN++RG+VEGL+
Sbjct: 247 VVRAARKLLQVTSSNVGEHSGGESSRIGMFLGWAMAAIYMGGRLPQICLNMRRGHVEGLN 306

Query: 219 PLMFIFALVGNMTYVA 266
           PLMF FALVGNMTYVA
Sbjct: 307 PLMFFFALVGNMTYVA 322


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