BLASTX nr result

ID: Coptis23_contig00017017 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00017017
         (808 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002526500.1| ATP binding protein, putative [Ricinus commu...   177   2e-42
ref|XP_002326878.1| predicted protein [Populus trichocarpa] gi|1...   174   2e-41
ref|XP_002267346.1| PREDICTED: 20 kDa chaperonin, chloroplastic ...   167   2e-39
gb|AFK37353.1| unknown [Lotus japonicus] gi|388502802|gb|AFK3946...   165   1e-38
gb|AEO32763.1| hypothetical protein [Amblyomma maculatum]             164   2e-38

>ref|XP_002526500.1| ATP binding protein, putative [Ricinus communis]
           gi|223534175|gb|EEF35891.1| ATP binding protein,
           putative [Ricinus communis]
          Length = 137

 Score =  177 bits (450), Expect = 2e-42
 Identities = 86/111 (77%), Positives = 99/111 (89%)
 Frame = -1

Query: 640 TKPNFGSFSSVGMRKNNSLRVKAVATKWEPTKVVPQADRVLIRLEEVPQKSAGGVLLPKS 461
           T P+      VG R+N SLR+ A+A KW+PTKVVPQADRVLIRL+E+P+KS+GGVLLPKS
Sbjct: 20  TSPSLSQQRIVGFRRN-SLRINAIAKKWDPTKVVPQADRVLIRLDELPEKSSGGVLLPKS 78

Query: 460 AVKFERYLMGEILSVGSEVGEIETGKKVLFSDINAYEVDLGTDARHCFCRA 308
           AVKFERYLMGEILSVG+EVGE+E GKKVLFSDINAYEVDLGTDA+HCFC+A
Sbjct: 79  AVKFERYLMGEILSVGTEVGEVEAGKKVLFSDINAYEVDLGTDAKHCFCKA 129


>ref|XP_002326878.1| predicted protein [Populus trichocarpa] gi|118481330|gb|ABK92608.1|
           unknown [Populus trichocarpa]
           gi|222835193|gb|EEE73628.1| predicted protein [Populus
           trichocarpa]
          Length = 138

 Score =  174 bits (441), Expect = 2e-41
 Identities = 80/97 (82%), Positives = 93/97 (95%)
 Frame = -1

Query: 598 KNNSLRVKAVATKWEPTKVVPQADRVLIRLEEVPQKSAGGVLLPKSAVKFERYLMGEILS 419
           K NSLR+ A++ KWEPTKVVPQADRVLIRLE++P+KS+GGVLLPKSAVKFERYLMGE+LS
Sbjct: 34  KRNSLRINAISKKWEPTKVVPQADRVLIRLEDLPEKSSGGVLLPKSAVKFERYLMGEVLS 93

Query: 418 VGSEVGEIETGKKVLFSDINAYEVDLGTDARHCFCRA 308
           VG+EVGE+E GKKVLFSDINAYE+DLGTDA+HCFC+A
Sbjct: 94  VGAEVGEVEAGKKVLFSDINAYEIDLGTDAKHCFCKA 130


>ref|XP_002267346.1| PREDICTED: 20 kDa chaperonin, chloroplastic [Vitis vinifera]
           gi|297734669|emb|CBI16720.3| unnamed protein product
           [Vitis vinifera]
          Length = 134

 Score =  167 bits (424), Expect = 2e-39
 Identities = 76/98 (77%), Positives = 93/98 (94%)
 Frame = -1

Query: 598 KNNSLRVKAVATKWEPTKVVPQADRVLIRLEEVPQKSAGGVLLPKSAVKFERYLMGEILS 419
           ++++L++ A+A KWEPTKVVPQADRVLIRL+++P+KS+GGVLLPKSAVKFERYLMGEILS
Sbjct: 30  RSSALKINAIAKKWEPTKVVPQADRVLIRLQDLPEKSSGGVLLPKSAVKFERYLMGEILS 89

Query: 418 VGSEVGEIETGKKVLFSDINAYEVDLGTDARHCFCRAS 305
           +G++VGE+E GKKVLFSDINAYEVDLGTD RHCFC+ S
Sbjct: 90  IGADVGEVEAGKKVLFSDINAYEVDLGTDGRHCFCKES 127


>gb|AFK37353.1| unknown [Lotus japonicus] gi|388502802|gb|AFK39467.1| unknown
           [Lotus japonicus]
          Length = 138

 Score =  165 bits (417), Expect = 1e-38
 Identities = 76/98 (77%), Positives = 90/98 (91%)
 Frame = -1

Query: 598 KNNSLRVKAVATKWEPTKVVPQADRVLIRLEEVPQKSAGGVLLPKSAVKFERYLMGEILS 419
           K NSL+V AVATKWEP KVVPQADRVLIRLEE+ QK+ GG+LLPKSAVKFERYL+GE+L+
Sbjct: 34  KRNSLKVNAVATKWEPAKVVPQADRVLIRLEELAQKTTGGILLPKSAVKFERYLVGEVLT 93

Query: 418 VGSEVGEIETGKKVLFSDINAYEVDLGTDARHCFCRAS 305
           VG+E GE++ G KVLF+D+NAYEVDLGTDA+HCFC+AS
Sbjct: 94  VGAEAGEVKAGAKVLFTDVNAYEVDLGTDAKHCFCKAS 131


>gb|AEO32763.1| hypothetical protein [Amblyomma maculatum]
          Length = 160

 Score =  164 bits (415), Expect = 2e-38
 Identities = 83/100 (83%), Positives = 93/100 (93%), Gaps = 2/100 (2%)
 Frame = -1

Query: 598 KNNSLRV-KAVATKWEPTKVVPQADRVLIRLEEVPQKSAGGVLLPKSAVKFERYLMGEIL 422
           KN S RV  A+A KW+P+KVVPQADRVLIRLE++P+KSAGGVLLPKSAVKFERYLMGEIL
Sbjct: 54  KNRSFRVCAALAQKWDPSKVVPQADRVLIRLEQLPEKSAGGVLLPKSAVKFERYLMGEIL 113

Query: 421 SVGSEVGEIETGKKVLFSDINAYEVDLG-TDARHCFCRAS 305
           SVGS+VGE+E GKKVLFSDINAYEVDLG +DA+HCFCRAS
Sbjct: 114 SVGSDVGEVEAGKKVLFSDINAYEVDLGSSDAKHCFCRAS 153


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