BLASTX nr result

ID: Coptis23_contig00017002 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00017002
         (467 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI26073.3| unnamed protein product [Vitis vinifera]              129   2e-28
ref|XP_002276128.2| PREDICTED: probable protein phosphatase 2C 4...   121   7e-26
gb|AFK48548.1| unknown [Lotus japonicus]                              120   9e-26
ref|XP_003528643.1| PREDICTED: probable protein phosphatase 2C 4...   119   2e-25
ref|XP_002516911.1| protein phosphatase-2c, putative [Ricinus co...   117   8e-25

>emb|CBI26073.3| unnamed protein product [Vitis vinifera]
          Length = 503

 Score =  129 bits (325), Expect = 2e-28
 Identities = 74/137 (54%), Positives = 88/137 (64%), Gaps = 5/137 (3%)
 Frame = -1

Query: 428 DVISSSFQXXXXXXXXXXXXXSDPCEWDSHRLQSVSAPTRSEGFLNATXXXXXXXXXXED 249
           D++SSS Q             S+  E DS+ L+S+SAP+RS+GFLNA           ED
Sbjct: 107 DILSSSLQSSLSNLSCSPSTQSEALENDSYSLKSMSAPSRSDGFLNAMEVQVAGGAAGED 166

Query: 248 RVQAVCSEENGWLFCAIYDGFNGRDAADFLAGTLYDTIGFYLRMVDTELKQE-----NFI 84
           RVQAVCSEENGWLFCAIYDGFNGRDAADFLAGTLY+TI  Y  ++D E +QE     N +
Sbjct: 167 RVQAVCSEENGWLFCAIYDGFNGRDAADFLAGTLYETIVCYFNLLDWESEQEFVRTSNGL 226

Query: 83  ASDGSLQCSVGDDNSSS 33
             DGSLQ  + D  S S
Sbjct: 227 GLDGSLQNILDDVISDS 243


>ref|XP_002276128.2| PREDICTED: probable protein phosphatase 2C 40-like [Vitis vinifera]
          Length = 397

 Score =  121 bits (303), Expect = 7e-26
 Identities = 65/110 (59%), Positives = 76/110 (69%), Gaps = 5/110 (4%)
 Frame = -1

Query: 326 VSAPTRSEGFLNATXXXXXXXXXXEDRVQAVCSEENGWLFCAIYDGFNGRDAADFLAGTL 147
           +SAP+RS+GFLNA           EDRVQAVCSEENGWLFCAIYDGFNGRDAADFLAGTL
Sbjct: 1   MSAPSRSDGFLNAMEVQVAGGAAGEDRVQAVCSEENGWLFCAIYDGFNGRDAADFLAGTL 60

Query: 146 YDTIGFYLRMVDTELKQE-----NFIASDGSLQCSVGDDNSSSEENILCR 12
           Y+TI  Y  ++D E +QE     N +  DGSLQ  + D N S  E I+ +
Sbjct: 61  YETIVCYFNLLDWESEQEFVRTSNGLGLDGSLQNILDDGNLSHVEKIVSK 110


>gb|AFK48548.1| unknown [Lotus japonicus]
          Length = 513

 Score =  120 bits (302), Expect = 9e-26
 Identities = 69/144 (47%), Positives = 87/144 (60%), Gaps = 5/144 (3%)
 Frame = -1

Query: 428 DVISSSFQXXXXXXXXXXXXXSDPCEWDSHRLQSVSAPTRSEGFLNATXXXXXXXXXXED 249
           D++SSS               S+  E D   L+S+S+P+RSEGFLN T          ED
Sbjct: 93  DILSSSLHSSFSNLSCSPSTPSEMPECDPCTLKSMSSPSRSEGFLNGTEVQVTGGAAGED 152

Query: 248 RVQAVCSEENGWLFCAIYDGFNGRDAADFLAGTLYDTIGFYLRMVDTELKQENFIASD-- 75
           RVQAVCSEENGWLFCAIYDGFNGRDAADFLA TLYDTI  Y  M+  +L+ ++  A+D  
Sbjct: 153 RVQAVCSEENGWLFCAIYDGFNGRDAADFLACTLYDTIISYFNMLCWDLEPDSIKATDNM 212

Query: 74  ---GSLQCSVGDDNSSSEENILCR 12
              GS  C++ + ++  E   L R
Sbjct: 213 GLAGSFHCNLDNSHTLHEHQSLSR 236


>ref|XP_003528643.1| PREDICTED: probable protein phosphatase 2C 40-like [Glycine max]
          Length = 493

 Score =  119 bits (299), Expect = 2e-25
 Identities = 73/143 (51%), Positives = 85/143 (59%), Gaps = 5/143 (3%)
 Frame = -1

Query: 428 DVISSSFQXXXXXXXXXXXXXSDPCEWDSHRLQSVSAPTRSEGFLNATXXXXXXXXXXED 249
           D++SSS               SD  E+DS  L+S+S P+RSEGFLNA           ED
Sbjct: 93  DILSSSLPNSLTYLSCSPSTTSDILEYDSCTLKSMSDPSRSEGFLNAKEVQVAGGAAGED 152

Query: 248 RVQAVCSEENGWLFCAIYDGFNGRDAADFLAGTLYDTIGFYLRMVDTELKQENFIASD-- 75
           RVQAVCSEENGWLFCAIYDGFNGRDAADFLAGTLYDTI  Y   +  EL+  +  A D  
Sbjct: 153 RVQAVCSEENGWLFCAIYDGFNGRDAADFLAGTLYDTIISYFNKLIWELEPGSVKAYDDG 212

Query: 74  ---GSLQCSVGDDNSSSEENILC 15
              GSLQ      N S++  + C
Sbjct: 213 CLGGSLQY-----NPSTKSEVSC 230


>ref|XP_002516911.1| protein phosphatase-2c, putative [Ricinus communis]
           gi|223543999|gb|EEF45525.1| protein phosphatase-2c,
           putative [Ricinus communis]
          Length = 495

 Score =  117 bits (294), Expect = 8e-25
 Identities = 65/117 (55%), Positives = 82/117 (70%), Gaps = 6/117 (5%)
 Frame = -1

Query: 359 PCEWDSHRLQSVSAPTRSEGFLNATXXXXXXXXXXEDRVQAVCSEENGWLFCAIYDGFNG 180
           P ++DS+ L+ +SAP++S+ FLNA           EDRVQAVCSEENGWLFCAIYDGFNG
Sbjct: 122 PPDYDSY-LKPMSAPSKSDSFLNAMEVQVAGGAAGEDRVQAVCSEENGWLFCAIYDGFNG 180

Query: 179 RDAADFLAGTLYDTIGFYLRMVDTELKQENFIASD-----GSLQCSV-GDDNSSSEE 27
           RDAADFLAGTLY+TI F+   +D E KQ+   AS+     GS+QC+  G  +S  E+
Sbjct: 181 RDAADFLAGTLYETIIFHTNSLDWESKQDVVTASNGLCLGGSIQCAFEGGSHSPGEK 237


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