BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00016997
         (613 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAL07975.1| Rar1 protein [Platanus x acerifolia]                  175   5e-42
gb|AFK40691.1| unknown [Lotus japonicus]                              170   2e-40
gb|ACU14236.1| unknown [Glycine max]                                  167   1e-39
ref|NP_001236558.1| RAR1 protein [Glycine max] gi|208964716|gb|A...   167   1e-39
gb|AFK47530.1| unknown [Medicago truncatula]                          167   2e-39

>emb|CAL07975.1| Rar1 protein [Platanus x acerifolia]
          Length = 133

 Score =  175 bits (444), Expect = 5e-42
 Identities = 76/106 (71%), Positives = 85/106 (80%)
 Frame = -1

Query: 613 KEENSKPLNAXXXXXXXXXXXPKHDPAPVKKIVGLNEPQTCRNKGCGKTFKEKDNHDTAC 434
           +E NSKP NA               PAP KKIV LN+PQTC+NKGCGKTFKEKDNHD+AC
Sbjct: 30  REVNSKPSNAVDVPAESNAGV--QTPAPAKKIVDLNQPQTCKNKGCGKTFKEKDNHDSAC 87

Query: 433 SYHPGPAVFHDRMRGWKCCDIHVKEFDEFIDIPPCAKGWHNSDPVS 296
           SYHPGPA+FHDRM+GWKCCDIHVKEFDEF+ IPPC KGWHN+DPV+
Sbjct: 88  SYHPGPAIFHDRMKGWKCCDIHVKEFDEFMSIPPCTKGWHNADPVA 133


>gb|AFK40691.1| unknown [Lotus japonicus]
          Length = 224

 Score =  170 bits (430), Expect = 2e-40
 Identities = 70/81 (86%), Positives = 75/81 (92%)
 Frame = -1

Query: 538 PAPVKKIVGLNEPQTCRNKGCGKTFKEKDNHDTACSYHPGPAVFHDRMRGWKCCDIHVKE 359
           P P KKIV +NEPQTC+NKGCG+TFKEKDNHDTACSYHPGPAVFHDRMRGWKCCD+HVKE
Sbjct: 144 PKPPKKIVDINEPQTCKNKGCGQTFKEKDNHDTACSYHPGPAVFHDRMRGWKCCDVHVKE 203

Query: 358 FDEFIDIPPCAKGWHNSDPVS 296
           FDEFI IPPC KGWHN+DP S
Sbjct: 204 FDEFISIPPCTKGWHNADPDS 224



 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 24/63 (38%), Positives = 33/63 (52%)
 Frame = -1

Query: 493 CRNKGCGKTFKEKDNHDTACSYHPGPAVFHDRMRGWKCCDIHVKEFDEFIDIPPCAKGWH 314
           C+  GC   F E DN + +C YH    +FHD M+ W CC     +F  F+ IP C  G H
Sbjct: 9   CQRIGCDAVFHEDDNPEGSCQYHDLGPLFHDGMKEWSCCKKRSHDFSLFLQIPGCKTGKH 68

Query: 313 NSD 305
            ++
Sbjct: 69  TTE 71


>gb|ACU14236.1| unknown [Glycine max]
          Length = 224

 Score =  167 bits (424), Expect = 1e-39
 Identities = 71/83 (85%), Positives = 76/83 (91%)
 Frame = -1

Query: 544 HDPAPVKKIVGLNEPQTCRNKGCGKTFKEKDNHDTACSYHPGPAVFHDRMRGWKCCDIHV 365
           H P P KKIV +NEPQ C+NKGCG+TFKEKDNHDTACSYHPGPAVFHDRMRGWKCCDIHV
Sbjct: 143 HAPKP-KKIVDINEPQVCKNKGCGQTFKEKDNHDTACSYHPGPAVFHDRMRGWKCCDIHV 201

Query: 364 KEFDEFIDIPPCAKGWHNSDPVS 296
           KEFDEF+ IPPCAKGWHN+DP S
Sbjct: 202 KEFDEFMSIPPCAKGWHNADPES 224



 Score = 61.2 bits (147), Expect = 1e-07
 Identities = 24/62 (38%), Positives = 31/62 (50%)
 Frame = -1

Query: 493 CRNKGCGKTFKEKDNHDTACSYHPGPAVFHDRMRGWKCCDIHVKEFDEFIDIPPCAKGWH 314
           C+  GC   F E DN D  C YH    +FHD  + W CC     +F  F++IP C  G H
Sbjct: 10  CQRIGCDAMFSEDDNPDGCCRYHDSGPIFHDGTKEWSCCKKRSHDFSLFLEIPGCKTGKH 69

Query: 313 NS 308
            +
Sbjct: 70  TT 71


>ref|NP_001236558.1| RAR1 protein [Glycine max] gi|208964716|gb|ACI31548.1| RAR1 protein
           [Glycine max] gi|288310308|gb|ADC45393.1| RAR1-1
           [Glycine max]
          Length = 224

 Score =  167 bits (424), Expect = 1e-39
 Identities = 71/83 (85%), Positives = 76/83 (91%)
 Frame = -1

Query: 544 HDPAPVKKIVGLNEPQTCRNKGCGKTFKEKDNHDTACSYHPGPAVFHDRMRGWKCCDIHV 365
           H P P KKIV +NEPQ C+NKGCG+TFKEKDNHDTACSYHPGPAVFHDRMRGWKCCDIHV
Sbjct: 143 HAPKP-KKIVDINEPQVCKNKGCGQTFKEKDNHDTACSYHPGPAVFHDRMRGWKCCDIHV 201

Query: 364 KEFDEFIDIPPCAKGWHNSDPVS 296
           KEFDEF+ IPPCAKGWHN+DP S
Sbjct: 202 KEFDEFMSIPPCAKGWHNADPES 224



 Score = 61.2 bits (147), Expect = 1e-07
 Identities = 24/62 (38%), Positives = 31/62 (50%)
 Frame = -1

Query: 493 CRNKGCGKTFKEKDNHDTACSYHPGPAVFHDRMRGWKCCDIHVKEFDEFIDIPPCAKGWH 314
           C+  GC   F E DN D  C YH    +FHD  + W CC     +F  F++IP C  G H
Sbjct: 10  CQRIGCDAMFSEDDNPDGCCRYHDSGPIFHDGTKEWSCCKKRSHDFSLFLEIPGCKTGKH 69

Query: 313 NS 308
            +
Sbjct: 70  TT 71


>gb|AFK47530.1| unknown [Medicago truncatula]
          Length = 225

 Score =  167 bits (422), Expect = 2e-39
 Identities = 68/77 (88%), Positives = 73/77 (94%)
 Frame = -1

Query: 532 PVKKIVGLNEPQTCRNKGCGKTFKEKDNHDTACSYHPGPAVFHDRMRGWKCCDIHVKEFD 353
           P KKIVG+NEPQ C+NKGCG+TFKEKDNHDTACSYHPGPAVFHDRMRGWKCCDIHVKEFD
Sbjct: 147 PPKKIVGINEPQICKNKGCGQTFKEKDNHDTACSYHPGPAVFHDRMRGWKCCDIHVKEFD 206

Query: 352 EFIDIPPCAKGWHNSDP 302
           EF+ IPPC KGWHN+DP
Sbjct: 207 EFMSIPPCTKGWHNADP 223



 Score = 61.2 bits (147), Expect = 1e-07
 Identities = 24/63 (38%), Positives = 33/63 (52%)
 Frame = -1

Query: 493 CRNKGCGKTFKEKDNHDTACSYHPGPAVFHDRMRGWKCCDIHVKEFDEFIDIPPCAKGWH 314
           C+  GC   F + DN D +C YH     FHD M+ W CC     +F  F++IP C  G H
Sbjct: 10  CQRIGCNAMFSDDDNLDGSCQYHDLGPTFHDGMKEWSCCKKRSHDFSLFLEIPGCKTGKH 69

Query: 313 NSD 305
            ++
Sbjct: 70  TTE 72