BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00016994
         (508 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tpg|DAA42318.1| TPA: hypothetical protein ZEAMMB73_924732 [Zea m...    75   4e-12
ref|NP_001140768.1| uncharacterized protein LOC100272843 [Zea ma...    75   4e-12
gb|ACN29168.1| unknown [Zea mays] gi|413920349|gb|AFW60281.1| sp...    75   6e-12
ref|XP_002329812.1| predicted protein [Populus trichocarpa] gi|2...    75   6e-12
ref|NP_001152419.1| LOC100286059 [Zea mays] gi|195656099|gb|ACG4...    75   6e-12

>tpg|DAA42318.1| TPA: hypothetical protein ZEAMMB73_924732 [Zea mays]
          Length = 590

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 41/98 (41%), Positives = 61/98 (62%), Gaps = 3/98 (3%)
 Frame = +1

Query: 43  PSRVICLLEAVCASALLCDDYYQRVKKFFQEKGEKYGTLF-VYIPRP--MGKKISAVGRV 213
           P++V+CL + V    L  D+ Y  + +  +E+G KYG L  V IPRP   G  ++ VG+V
Sbjct: 488 PTKVVCLTQVVTEDELRDDEEYDDIVEDMREEGHKYGNLVKVAIPRPDPSGAPVAGVGKV 547

Query: 214 FLEYSSIEDSAKAMEGVIRKDFGYYKVILACYYPEDKY 327
           FLEY+ +E S KA  G+  + FG  +V+ A +YPEDK+
Sbjct: 548 FLEYADVEGSTKAKTGMHGRKFGGNQVV-AVFYPEDKF 584


>ref|NP_001140768.1| uncharacterized protein LOC100272843 [Zea mays]
           gi|194701008|gb|ACF84588.1| unknown [Zea mays]
           gi|414591744|tpg|DAA42315.1| TPA: hypothetical protein
           ZEAMMB73_924732 [Zea mays]
          Length = 583

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 41/98 (41%), Positives = 61/98 (62%), Gaps = 3/98 (3%)
 Frame = +1

Query: 43  PSRVICLLEAVCASALLCDDYYQRVKKFFQEKGEKYGTLF-VYIPRP--MGKKISAVGRV 213
           P++V+CL + V    L  D+ Y  + +  +E+G KYG L  V IPRP   G  ++ VG+V
Sbjct: 481 PTKVVCLTQVVTEDELRDDEEYDDIVEDMREEGHKYGNLVKVAIPRPDPSGAPVAGVGKV 540

Query: 214 FLEYSSIEDSAKAMEGVIRKDFGYYKVILACYYPEDKY 327
           FLEY+ +E S KA  G+  + FG  +V+ A +YPEDK+
Sbjct: 541 FLEYADVEGSTKAKTGMHGRKFGGNQVV-AVFYPEDKF 577


>gb|ACN29168.1| unknown [Zea mays] gi|413920349|gb|AFW60281.1| splicing factor U2AF
           subunit [Zea mays]
          Length = 594

 Score = 75.1 bits (183), Expect = 6e-12
 Identities = 41/98 (41%), Positives = 61/98 (62%), Gaps = 3/98 (3%)
 Frame = +1

Query: 43  PSRVICLLEAVCASALLCDDYYQRVKKFFQEKGEKYGTLF-VYIPRP--MGKKISAVGRV 213
           P++V+CL + V A  L  D+ Y  + +  +E+G KYG L  V IPRP      ++ VG+V
Sbjct: 492 PTKVVCLTQVVTADELRDDEEYNDIVEDMREEGRKYGNLVKVVIPRPDPSDAPVAGVGKV 551

Query: 214 FLEYSSIEDSAKAMEGVIRKDFGYYKVILACYYPEDKY 327
           FLEY+ +E S KA  G+  + FG  +V+ A +YPEDK+
Sbjct: 552 FLEYADVEGSTKAKTGMHGRKFGGNQVV-AVFYPEDKF 588


>ref|XP_002329812.1| predicted protein [Populus trichocarpa] gi|222870874|gb|EEF08005.1|
           predicted protein [Populus trichocarpa]
          Length = 321

 Score = 75.1 bits (183), Expect = 6e-12
 Identities = 43/102 (42%), Positives = 59/102 (57%), Gaps = 3/102 (2%)
 Frame = +1

Query: 43  PSRVICLLEAVCASALLCDDYYQRVKKFFQEKGEKYGTLF-VYIPRP--MGKKISAVGRV 213
           PS+V+CL EA+    L  D+ Y+ + +  +E+  K+GTL  V IPRP    ++IS  G+V
Sbjct: 193 PSKVLCLTEAIAMEVLADDEEYEEILEDMREECCKFGTLINVVIPRPSQTEEQISGAGKV 252

Query: 214 FLEYSSIEDSAKAMEGVIRKDFGYYKVILACYYPEDKYHEKD 339
           FLEYS     A A   +  + FG    + A YYPEDKYH  D
Sbjct: 253 FLEYSDTSSCANARNALNGRKFG-GNTVNASYYPEDKYHNGD 293


>ref|NP_001152419.1| LOC100286059 [Zea mays] gi|195656099|gb|ACG47517.1| splicing factor
           U2AF 65 kDa subunit [Zea mays]
          Length = 596

 Score = 75.1 bits (183), Expect = 6e-12
 Identities = 41/98 (41%), Positives = 61/98 (62%), Gaps = 3/98 (3%)
 Frame = +1

Query: 43  PSRVICLLEAVCASALLCDDYYQRVKKFFQEKGEKYGTLF-VYIPRP--MGKKISAVGRV 213
           P++V+CL + V A  L  D+ Y  + +  +E+G KYG L  V IPRP      ++ VG+V
Sbjct: 494 PTKVVCLTQVVTADELRDDEEYNDIVEDMREEGRKYGNLVKVVIPRPDPSDAPVAGVGKV 553

Query: 214 FLEYSSIEDSAKAMEGVIRKDFGYYKVILACYYPEDKY 327
           FLEY+ +E S KA  G+  + FG  +V+ A +YPEDK+
Sbjct: 554 FLEYADVEGSTKAKTGMHGRKFGGNQVV-AVFYPEDKF 590