BLASTX nr result

ID: Coptis23_contig00016949 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00016949
         (1229 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263925.2| PREDICTED: uncharacterized protein LOC100258...   359   7e-97
emb|CAN64660.1| hypothetical protein VITISV_009615 [Vitis vinifera]   359   7e-97
emb|CBI40561.3| unnamed protein product [Vitis vinifera]              341   2e-91
ref|XP_002272717.2| PREDICTED: uncharacterized protein LOC100247...   335   1e-89
ref|XP_002516668.1| transcription factor, putative [Ricinus comm...   317   3e-84

>ref|XP_002263925.2| PREDICTED: uncharacterized protein LOC100258626 [Vitis vinifera]
          Length = 1035

 Score =  359 bits (922), Expect = 7e-97
 Identities = 179/373 (47%), Positives = 243/373 (65%), Gaps = 14/373 (3%)
 Frame = -1

Query: 1169 LVGDLKTVKQTKKVDELVKSKDCRGGKKELVSYGEFSSKFGEVQRKITRN---AYAKLGE 999
            LV DL+      K D + +  D    K E  + G   ++ G  QR  T +   + +++ E
Sbjct: 88   LVKDLRKRHPITKKDRVNRIVDINSDKIES-NCGNGKAESGGGQRSSTEDQSKSGSRISE 146

Query: 998  GRLATEEKETTK----------KDNDSKNKEQKRLMCHQCLRSDKIGIIYCSNCKRKRYC 849
              +  + K+ +           +D  +KNKE   LMCHQC R+DK G+++CS+C RKRYC
Sbjct: 147  NGVLGDNKKNSGSNCKGVRNSGQDKLNKNKEHGSLMCHQCQRNDKSGVVHCSSCTRKRYC 206

Query: 848  HDCITKWYPGKTFEEVRTACPYCRGHCNCKACLDGEIYVGKNWKA-GGNVKLQRXXXXXX 672
             +CI KWYP KT +E+ +ACP+C G+CNCKACL   ++V  N K    +VKLQR      
Sbjct: 207  FECIAKWYPEKTRDEIESACPFCCGNCNCKACLREVLFVKANHKELDDSVKLQRLQYLLF 266

Query: 671  XXXXLVRQIHSEQNCELEVEAKIQGTQLTEMDIEKCKLDEDDRLYCDNCHTSIVDIHRSC 492
                ++R +H EQ  E+E+EAKI+G QL E DI + KL++++RLYCDNC+TSIVD HRSC
Sbjct: 267  KALPVLRHVHQEQKSEVEIEAKIRGVQLMESDITRSKLEKNERLYCDNCNTSIVDFHRSC 326

Query: 491  PNVDCSYDLCLTCCRELREGFQPGGNEADSSHQQFIERGNNQDIDENGLSGALRKGSGRQ 312
            PN DCSYDLCL CCRELREG QPGG+EA++SHQQF+ER + Q  D    +   RK +GR 
Sbjct: 327  PNPDCSYDLCLICCRELREGRQPGGSEAETSHQQFVERAHGQVADGKSKATTKRKRNGRV 386

Query: 311  TPVALASNNCMTRSCCQFPDWKANGDGSIPCPPKERGGCGNGLLELRRNFNAHWVLELLN 132
            + V LA+++       QFPDW+A GDGSIPCPPKERGGCG  +LELRRNF A+WV++L+ 
Sbjct: 387  SEVELAADDSKADVSNQFPDWRATGDGSIPCPPKERGGCGTAILELRRNFKANWVMKLIQ 446

Query: 131  NAEELTRNCQFSD 93
            ++E+L  + Q  D
Sbjct: 447  SSEDLICHYQLPD 459


>emb|CAN64660.1| hypothetical protein VITISV_009615 [Vitis vinifera]
          Length = 1160

 Score =  359 bits (922), Expect = 7e-97
 Identities = 179/373 (47%), Positives = 243/373 (65%), Gaps = 14/373 (3%)
 Frame = -1

Query: 1169 LVGDLKTVKQTKKVDELVKSKDCRGGKKELVSYGEFSSKFGEVQRKITRN---AYAKLGE 999
            LV DL+      K D + +  D    K E  + G   ++ G  QR  T +   + +++ E
Sbjct: 88   LVKDLRKRHPITKKDRVNRIVDINSDKIES-NCGNGKAESGGGQRSSTEDQSKSGSRISE 146

Query: 998  GRLATEEKETTK----------KDNDSKNKEQKRLMCHQCLRSDKIGIIYCSNCKRKRYC 849
              +  + K+ +           +D  +KNKE   LMCHQC R+DK G+++CS+C RKRYC
Sbjct: 147  NGVLGDNKKNSGSNCKGVRNSGQDKLNKNKEHGSLMCHQCQRNDKSGVVHCSSCTRKRYC 206

Query: 848  HDCITKWYPGKTFEEVRTACPYCRGHCNCKACLDGEIYVGKNWKA-GGNVKLQRXXXXXX 672
             +CI KWYP KT +E+ +ACP+C G+CNCKACL   ++V  N K    +VKLQR      
Sbjct: 207  FECIAKWYPEKTRDEIESACPFCCGNCNCKACLREVLFVKANHKELDDSVKLQRLQYLLF 266

Query: 671  XXXXLVRQIHSEQNCELEVEAKIQGTQLTEMDIEKCKLDEDDRLYCDNCHTSIVDIHRSC 492
                ++R +H EQ  E+E+EAKI+G QL E DI + KL++++RLYCDNC+TSIVD HRSC
Sbjct: 267  KALPVLRHVHQEQKSEVEIEAKIRGVQLMESDITRSKLEKNERLYCDNCNTSIVDFHRSC 326

Query: 491  PNVDCSYDLCLTCCRELREGFQPGGNEADSSHQQFIERGNNQDIDENGLSGALRKGSGRQ 312
            PN DCSYDLCL CCRELREG QPGG+EA++SHQQF+ER + Q  D    +   RK +GR 
Sbjct: 327  PNPDCSYDLCLICCRELREGRQPGGSEAETSHQQFVERAHGQVADGKSKATTKRKRNGRV 386

Query: 311  TPVALASNNCMTRSCCQFPDWKANGDGSIPCPPKERGGCGNGLLELRRNFNAHWVLELLN 132
            + V LA+++       QFPDW+A GDGSIPCPPKERGGCG  +LELRRNF A+WV++L+ 
Sbjct: 387  SEVELAADDSKADVSNQFPDWRATGDGSIPCPPKERGGCGTAILELRRNFKANWVMKLIQ 446

Query: 131  NAEELTRNCQFSD 93
            ++E+L  + Q  D
Sbjct: 447  SSEDLICHYQLPD 459


>emb|CBI40561.3| unnamed protein product [Vitis vinifera]
          Length = 897

 Score =  341 bits (875), Expect = 2e-91
 Identities = 162/315 (51%), Positives = 213/315 (67%), Gaps = 5/315 (1%)
 Frame = -1

Query: 1022 NAYAKLGEGRLATEEKETTK----KDNDSKNKEQKRLMCHQCLRSDKIGIIYCSNCKRKR 855
            N  A+ G G+ ++ E ++       D  +KNKE   LMCHQC R+DK G+++CS+C RKR
Sbjct: 121  NGKAESGGGQRSSTEDQSKSGSRISDKLNKNKEHGSLMCHQCQRNDKSGVVHCSSCTRKR 180

Query: 854  YCHDCITKWYPGKTFEEVRTACPYCRGHCNCKACLDGEIYVGKNWKA-GGNVKLQRXXXX 678
            YC +CI KWYP KT +E+ +ACP+C G+CNCKACL   ++V  N K    +VKLQR    
Sbjct: 181  YCFECIAKWYPEKTRDEIESACPFCCGNCNCKACLREVLFVKANHKELDDSVKLQRLQYL 240

Query: 677  XXXXXXLVRQIHSEQNCELEVEAKIQGTQLTEMDIEKCKLDEDDRLYCDNCHTSIVDIHR 498
                  ++R +H EQ  E+E+EAKI+G QL E DI + KL++++RLYCDNC+TSIVD HR
Sbjct: 241  LFKALPVLRHVHQEQKSEVEIEAKIRGVQLMESDITRSKLEKNERLYCDNCNTSIVDFHR 300

Query: 497  SCPNVDCSYDLCLTCCRELREGFQPGGNEADSSHQQFIERGNNQDIDENGLSGALRKGSG 318
            SCPN DCSYDLCL CCRELREG QPGG+EA++SHQQF+ER + Q                
Sbjct: 301  SCPNPDCSYDLCLICCRELREGRQPGGSEAETSHQQFVERAHGQ---------------- 344

Query: 317  RQTPVALASNNCMTRSCCQFPDWKANGDGSIPCPPKERGGCGNGLLELRRNFNAHWVLEL 138
                  LA+++       QFPDW+A GDGSIPCPPKERGGCG  +LELRRNF A+WV++L
Sbjct: 345  ------LAADDSKADVSNQFPDWRATGDGSIPCPPKERGGCGTAILELRRNFKANWVMKL 398

Query: 137  LNNAEELTRNCQFSD 93
            + ++E+L  + Q  D
Sbjct: 399  IQSSEDLICHYQLPD 413


>ref|XP_002272717.2| PREDICTED: uncharacterized protein LOC100247074 [Vitis vinifera]
          Length = 1876

 Score =  335 bits (860), Expect = 1e-89
 Identities = 171/346 (49%), Positives = 222/346 (64%), Gaps = 12/346 (3%)
 Frame = -1

Query: 1109 KDCRGGKKELVSYGEFSSKFGEVQRKITRNAYAKL----GEGRLATEEK-------ETTK 963
            +DC   +   +S GE  +  G V ++  R    KL    GE     E K        +  
Sbjct: 1005 RDCGNAQ---MSNGELLTDTGNVHKR-PRGRPKKLKDHRGESNCIKEGKFNENGLANSGL 1060

Query: 962  KDNDSKNKEQKRLMCHQCLRSDKIGIIYCSNCKRKRYCHDCITKWYPGKTFEEVRTACPY 783
             D  +  +EQ+ LMCHQCLR  K G++ CS+CK+KRYC++C+ KWYP KT E++R ACP+
Sbjct: 1061 SDASNGKREQRSLMCHQCLRHAKSGVVVCSSCKKKRYCYECLAKWYPEKTREDIRNACPF 1120

Query: 782  CRGHCNCKACLDGEIYVGK-NWKAGGNVKLQRXXXXXXXXXXLVRQIHSEQNCELEVEAK 606
            CR  CNC+ CL  ++ V   + +A  N+KLQ+          L+R IH EQ+ E+ VEA+
Sbjct: 1121 CRCICNCRMCLKQDLVVMTGHGEADTNIKLQKLLYLLDRTLPLLRHIHGEQSSEIHVEAQ 1180

Query: 605  IQGTQLTEMDIEKCKLDEDDRLYCDNCHTSIVDIHRSCPNVDCSYDLCLTCCRELREGFQ 426
            I+G QLTE DI +  LD+DDR+YCDNC+TSIV++HRSCPN DCSYDLCLTCCRELR+G Q
Sbjct: 1181 IRGAQLTEEDIMRSILDKDDRVYCDNCNTSIVNLHRSCPNPDCSYDLCLTCCRELRKGLQ 1240

Query: 425  PGGNEADSSHQQFIERGNNQDIDENGLSGALRKGSGRQTPVALASNNCMTRSCCQFPDWK 246
            PGGNEA+SSHQQF+ER N Q  +  G   A  +  G ++  A  +NN      C FPDW+
Sbjct: 1241 PGGNEAESSHQQFVERVNGQGTEVKGRIPAHDERYGWESDGAHPTNN-YAADTCDFPDWR 1299

Query: 245  ANGDGSIPCPPKERGGCGNGLLELRRNFNAHWVLELLNNAEELTRN 108
             N DGSIPCPPK RGGCG   LELRR F  +WV  L+ +AE+LT N
Sbjct: 1300 VNMDGSIPCPPKARGGCGTETLELRRIFEPNWVDHLIKSAEDLTMN 1345


>ref|XP_002516668.1| transcription factor, putative [Ricinus communis]
            gi|223544163|gb|EEF45687.1| transcription factor,
            putative [Ricinus communis]
          Length = 939

 Score =  317 bits (813), Expect = 3e-84
 Identities = 153/286 (53%), Positives = 190/286 (66%), Gaps = 2/286 (0%)
 Frame = -1

Query: 959  DNDSKNKEQKRLMCHQCLRSDKIGIIYCSNCKRKRYCHDCITKWYPGKTFEEVRTACPYC 780
            DN    K Q+ LMCHQC +SD+ G++ CSNC+RKRYC+DC+ KWYP KT+E++  ACP+C
Sbjct: 149  DNTESKKVQRNLMCHQCWKSDRNGVVICSNCRRKRYCYDCLAKWYPEKTWEQIEIACPFC 208

Query: 779  RGHCNCKACL--DGEIYVGKNWKAGGNVKLQRXXXXXXXXXXLVRQIHSEQNCELEVEAK 606
            RG+CNC+ CL  D    VG N +A  N KLQ           L+R I  EQ+ ELEVE +
Sbjct: 209  RGNCNCRLCLKEDAVALVG-NTEADKNTKLQNFLYLLYKTLPLLRHIQQEQSSELEVEER 267

Query: 605  IQGTQLTEMDIEKCKLDEDDRLYCDNCHTSIVDIHRSCPNVDCSYDLCLTCCRELREGFQ 426
            I+G QLTE D+ K  LD+DDRLYCDNC+TSIV+ HRSC +  CSYDLCLTCC E+R+G Q
Sbjct: 268  IRGVQLTEEDVPKSVLDDDDRLYCDNCNTSIVNFHRSCSDPGCSYDLCLTCCSEIRKGIQ 327

Query: 425  PGGNEADSSHQQFIERGNNQDIDENGLSGALRKGSGRQTPVALASNNCMTRSCCQFPDWK 246
             GGN+A+SS  QF+ER N QD   N    A +K    +  V+   N C T S    PDW+
Sbjct: 328  SGGNDAESSLHQFVERVNGQDTYLNDQITANQKRFCCEMQVSHLVNKCDTESSNDSPDWR 387

Query: 245  ANGDGSIPCPPKERGGCGNGLLELRRNFNAHWVLELLNNAEELTRN 108
            A  DG I CPPK RGGCG G+L +RR F A+ V EL+ N EEL  N
Sbjct: 388  AETDGQISCPPKARGGCGTGMLVMRRVFEANMVKELIKNTEELIIN 433


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