BLASTX nr result

ID: Coptis23_contig00016948 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00016948
         (205 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285469.1| PREDICTED: uncharacterized protein LOC100261...   115   4e-24
emb|CBI23720.3| unnamed protein product [Vitis vinifera]              115   4e-24
emb|CAN83111.1| hypothetical protein VITISV_026573 [Vitis vinifera]   115   4e-24
ref|XP_002528350.1| ribonucleoprotein, chloroplast, putative [Ri...   114   1e-23
ref|XP_002314506.1| predicted protein [Populus trichocarpa] gi|2...   114   1e-23

>ref|XP_002285469.1| PREDICTED: uncharacterized protein LOC100261382 [Vitis vinifera]
          Length = 751

 Score =  115 bits (288), Expect = 4e-24
 Identities = 54/65 (83%), Positives = 60/65 (92%)
 Frame = -1

Query: 196 EVPSNTKLYFGNLPYNCDSAQLAGIIQDYASPELVEVLYDRTTGKSRGFAFVTMSSVEDC 17
           E P NTKLYFGNLPY+CDSAQLAGIIQ+Y SPELVEVLY+R TG+SRGFAFVTMSSVEDC
Sbjct: 106 ESPVNTKLYFGNLPYSCDSAQLAGIIQNYGSPELVEVLYNRDTGRSRGFAFVTMSSVEDC 165

Query: 16  NTVLQ 2
           N V++
Sbjct: 166 NAVIE 170


>emb|CBI23720.3| unnamed protein product [Vitis vinifera]
          Length = 283

 Score =  115 bits (288), Expect = 4e-24
 Identities = 54/65 (83%), Positives = 60/65 (92%)
 Frame = -1

Query: 196 EVPSNTKLYFGNLPYNCDSAQLAGIIQDYASPELVEVLYDRTTGKSRGFAFVTMSSVEDC 17
           E P NTKLYFGNLPY+CDSAQLAGIIQ+Y SPELVEVLY+R TG+SRGFAFVTMSSVEDC
Sbjct: 106 ESPVNTKLYFGNLPYSCDSAQLAGIIQNYGSPELVEVLYNRDTGRSRGFAFVTMSSVEDC 165

Query: 16  NTVLQ 2
           N V++
Sbjct: 166 NAVIE 170


>emb|CAN83111.1| hypothetical protein VITISV_026573 [Vitis vinifera]
          Length = 355

 Score =  115 bits (288), Expect = 4e-24
 Identities = 54/65 (83%), Positives = 59/65 (90%)
 Frame = -1

Query: 196 EVPSNTKLYFGNLPYNCDSAQLAGIIQDYASPELVEVLYDRTTGKSRGFAFVTMSSVEDC 17
           E P NTKLYFGNLPY+CDSA LAGIIQ+Y SPELVEVLYDR TG+SRGFAFVTMSSVEDC
Sbjct: 61  ESPVNTKLYFGNLPYSCDSAHLAGIIQNYGSPELVEVLYDRDTGRSRGFAFVTMSSVEDC 120

Query: 16  NTVLQ 2
           N V++
Sbjct: 121 NAVIE 125


>ref|XP_002528350.1| ribonucleoprotein, chloroplast, putative [Ricinus communis]
           gi|223532218|gb|EEF34022.1| ribonucleoprotein,
           chloroplast, putative [Ricinus communis]
          Length = 285

 Score =  114 bits (284), Expect = 1e-23
 Identities = 53/63 (84%), Positives = 58/63 (92%)
 Frame = -1

Query: 190 PSNTKLYFGNLPYNCDSAQLAGIIQDYASPELVEVLYDRTTGKSRGFAFVTMSSVEDCNT 11
           P NTKLYFGNLPYN DSAQLAGIIQDY +PELVEVLYDR TG+SRGFAFVTMS+VEDCN 
Sbjct: 110 PINTKLYFGNLPYNVDSAQLAGIIQDYGTPELVEVLYDRDTGRSRGFAFVTMSTVEDCNA 169

Query: 10  VLQ 2
           V++
Sbjct: 170 VIE 172


>ref|XP_002314506.1| predicted protein [Populus trichocarpa] gi|222863546|gb|EEF00677.1|
           predicted protein [Populus trichocarpa]
          Length = 279

 Score =  114 bits (284), Expect = 1e-23
 Identities = 52/65 (80%), Positives = 59/65 (90%)
 Frame = -1

Query: 196 EVPSNTKLYFGNLPYNCDSAQLAGIIQDYASPELVEVLYDRTTGKSRGFAFVTMSSVEDC 17
           E+P NTKLYFGNLPYN DSAQLAGIIQ+Y SPE+VEVLY R TG+SRGFAFVTMSS+EDC
Sbjct: 102 EIPVNTKLYFGNLPYNVDSAQLAGIIQEYGSPEMVEVLYHRETGRSRGFAFVTMSSIEDC 161

Query: 16  NTVLQ 2
           N V++
Sbjct: 162 NAVIE 166


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