BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00016940
         (354 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003601098.1| Holocarboxylase synthetase hcs2 [Medicago tr...    82   3e-14
ref|NP_850957.1| holocarboxylase synthetase 2 [Arabidopsis thali...    80   1e-13
ref|NP_174903.3| holocarboxylase synthetase 2 [Arabidopsis thali...    80   1e-13
ref|NP_565605.1| holocarboxylase synthase 1 [Arabidopsis thalian...    80   1e-13
ref|XP_002893926.1| holocarboxylase synthetase 2 [Arabidopsis ly...    80   1e-13

>ref|XP_003601098.1| Holocarboxylase synthetase hcs2 [Medicago truncatula]
           gi|355490146|gb|AES71349.1| Holocarboxylase synthetase
           hcs2 [Medicago truncatula]
          Length = 361

 Score = 82.4 bits (202), Expect = 3e-14
 Identities = 38/50 (76%), Positives = 45/50 (90%)
 Frame = -3

Query: 352 ESVDEVAVTVQGLTASGYLLAIDDDNKLYELHPDGNSFDFFKGLVRKKLE 203
           E V E AVT+QGLT+SGYLLA+ DDN++ ELHPDGNSFDFFKGLVR+KL+
Sbjct: 312 EKVVEHAVTIQGLTSSGYLLAVGDDNQMCELHPDGNSFDFFKGLVRRKLD 361


>ref|NP_850957.1| holocarboxylase synthetase 2 [Arabidopsis thaliana]
           gi|332193776|gb|AEE31897.1| holocarboxylase synthetase 2
           [Arabidopsis thaliana]
          Length = 329

 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 37/49 (75%), Positives = 43/49 (87%)
 Frame = -3

Query: 352 ESVDEVAVTVQGLTASGYLLAIDDDNKLYELHPDGNSFDFFKGLVRKKL 206
           + V +  VT+QGLT+SGYLLAI DDN +YELHPDGNSFDFFKGLVR+KL
Sbjct: 281 DQVVQNVVTIQGLTSSGYLLAIGDDNVMYELHPDGNSFDFFKGLVRRKL 329


>ref|NP_174903.3| holocarboxylase synthetase 2 [Arabidopsis thaliana]
           gi|332193774|gb|AEE31895.1| holocarboxylase synthetase 2
           [Arabidopsis thaliana]
          Length = 286

 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 37/49 (75%), Positives = 43/49 (87%)
 Frame = -3

Query: 352 ESVDEVAVTVQGLTASGYLLAIDDDNKLYELHPDGNSFDFFKGLVRKKL 206
           + V +  VT+QGLT+SGYLLAI DDN +YELHPDGNSFDFFKGLVR+KL
Sbjct: 238 DQVVQNVVTIQGLTSSGYLLAIGDDNVMYELHPDGNSFDFFKGLVRRKL 286


>ref|NP_565605.1| holocarboxylase synthase 1 [Arabidopsis thaliana]
           gi|30682866|ref|NP_850067.1| holocarboxylase synthase 1
           [Arabidopsis thaliana] gi|1688072|gb|AAC49706.1| biotin
           holocarboxylase synthetase [Arabidopsis thaliana]
           gi|20197509|gb|AAD31371.2| biotin holocarboxylase
           synthetase [Arabidopsis thaliana]
           gi|89000993|gb|ABD59086.1| At2g25710 [Arabidopsis
           thaliana] gi|330252646|gb|AEC07740.1| holocarboxylase
           synthase 1 [Arabidopsis thaliana]
           gi|330252647|gb|AEC07741.1| holocarboxylase synthase 1
           [Arabidopsis thaliana]
          Length = 367

 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 35/49 (71%), Positives = 44/49 (89%)
 Frame = -3

Query: 352 ESVDEVAVTVQGLTASGYLLAIDDDNKLYELHPDGNSFDFFKGLVRKKL 206
           + V +  VT+QGLT+SGYLLA+ DDN++YELHPDGNSFDFFKGLVR+K+
Sbjct: 319 DQVVQNVVTIQGLTSSGYLLAVGDDNQMYELHPDGNSFDFFKGLVRRKI 367


>ref|XP_002893926.1| holocarboxylase synthetase 2 [Arabidopsis lyrata subsp. lyrata]
           gi|297339768|gb|EFH70185.1| holocarboxylase synthetase 2
           [Arabidopsis lyrata subsp. lyrata]
          Length = 328

 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 37/49 (75%), Positives = 43/49 (87%)
 Frame = -3

Query: 352 ESVDEVAVTVQGLTASGYLLAIDDDNKLYELHPDGNSFDFFKGLVRKKL 206
           + V +  VT+QGLT+SGYLLAI DDN +YELHPDGNSFDFFKGLVR+KL
Sbjct: 280 DQVVQNVVTIQGLTSSGYLLAIGDDNVMYELHPDGNSFDFFKGLVRRKL 328