BLASTX nr result

ID: Coptis23_contig00016937 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00016937
         (320 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI39671.3| unnamed protein product [Vitis vinifera]              126   2e-27
ref|XP_003633617.1| PREDICTED: G patch domain-containing protein...   125   4e-27
ref|XP_003554597.1| PREDICTED: G patch domain-containing protein...   122   3e-26
ref|XP_003521644.1| PREDICTED: G patch domain-containing protein...   119   3e-25
ref|XP_002512582.1| nucleic acid binding protein, putative [Rici...   114   6e-24

>emb|CBI39671.3| unnamed protein product [Vitis vinifera]
          Length = 313

 Score =  126 bits (316), Expect = 2e-27
 Identities = 61/89 (68%), Positives = 73/89 (82%), Gaps = 5/89 (5%)
 Frame = +1

Query: 67  MEHKWNCMRQETTAQDEAPGKMEEEY-----DNLGDDFRLPISHKPTENLDLDNVEQATL 231
           M+ +W   RQET+++D    + EE Y     ++L +DFRLPI+HKPTEN+DLDNVEQA+L
Sbjct: 1   MDRRWYSGRQETSSRDNRQREREEAYKDSLVEDLAEDFRLPINHKPTENVDLDNVEQASL 60

Query: 232 DTQLTSSNIGFRLLQKMGWKGKGLGKDEQ 318
           DTQLTSSNIGFRLLQKMGWKGKGLGKDEQ
Sbjct: 61  DTQLTSSNIGFRLLQKMGWKGKGLGKDEQ 89


>ref|XP_003633617.1| PREDICTED: G patch domain-containing protein 8-like [Vitis
           vinifera]
          Length = 296

 Score =  125 bits (314), Expect = 4e-27
 Identities = 60/86 (69%), Positives = 73/86 (84%), Gaps = 2/86 (2%)
 Frame = +1

Query: 67  MEHKWNCMRQETTAQDEAPGKMEEE--YDNLGDDFRLPISHKPTENLDLDNVEQATLDTQ 240
           M+ +W   RQET+++D    + EE+   ++L +DFRLPI+HKPTEN+DLDNVEQA+LDTQ
Sbjct: 1   MDRRWYSGRQETSSRDNRQREREEDSLVEDLAEDFRLPINHKPTENVDLDNVEQASLDTQ 60

Query: 241 LTSSNIGFRLLQKMGWKGKGLGKDEQ 318
           LTSSNIGFRLLQKMGWKGKGLGKDEQ
Sbjct: 61  LTSSNIGFRLLQKMGWKGKGLGKDEQ 86


>ref|XP_003554597.1| PREDICTED: G patch domain-containing protein 8-like [Glycine max]
          Length = 304

 Score =  122 bits (306), Expect = 3e-26
 Identities = 58/89 (65%), Positives = 71/89 (79%), Gaps = 5/89 (5%)
 Frame = +1

Query: 67  MEHKWNCMRQETTAQDEAPGKMEEEY-----DNLGDDFRLPISHKPTENLDLDNVEQATL 231
           ME++W   RQET  +D    K E+ Y     ++L +DF LPI+H+PTEN+DLDNVEQA+L
Sbjct: 1   MEYRWTNGRQETGGRDRRQSKREQAYQDSLIEDLSEDFSLPINHRPTENVDLDNVEQASL 60

Query: 232 DTQLTSSNIGFRLLQKMGWKGKGLGKDEQ 318
           DTQ+TSSNIGF+LLQKMGWKGKGLGKDEQ
Sbjct: 61  DTQITSSNIGFKLLQKMGWKGKGLGKDEQ 89


>ref|XP_003521644.1| PREDICTED: G patch domain-containing protein 8-like [Glycine max]
          Length = 304

 Score =  119 bits (298), Expect = 3e-25
 Identities = 58/89 (65%), Positives = 70/89 (78%), Gaps = 5/89 (5%)
 Frame = +1

Query: 67  MEHKWNCMRQETTAQDEAPGKMEEEY-----DNLGDDFRLPISHKPTENLDLDNVEQATL 231
           ME++    RQET  +D    K E+ Y     ++L  DFRLPI+H+PTEN+DLDNVEQA+L
Sbjct: 1   MEYRRTSGRQETGGRDRRQSKREQAYQDSLIEDLSQDFRLPINHRPTENVDLDNVEQASL 60

Query: 232 DTQLTSSNIGFRLLQKMGWKGKGLGKDEQ 318
           DTQ+TSSNIGF+LLQKMGWKGKGLGKDEQ
Sbjct: 61  DTQITSSNIGFKLLQKMGWKGKGLGKDEQ 89


>ref|XP_002512582.1| nucleic acid binding protein, putative [Ricinus communis]
           gi|223548543|gb|EEF50034.1| nucleic acid binding
           protein, putative [Ricinus communis]
          Length = 300

 Score =  114 bits (286), Expect = 6e-24
 Identities = 53/86 (61%), Positives = 71/86 (82%), Gaps = 2/86 (2%)
 Frame = +1

Query: 67  MEHKWNCMRQETTAQDEAPGKMEEE--YDNLGDDFRLPISHKPTENLDLDNVEQATLDTQ 240
           M+ +W   +QET + DE+     ++   ++L +DFRLPI+H+PTEN+DL+NVEQA+LDT+
Sbjct: 1   MDCRWYGSKQETVSHDESQQDRNQDSLIEDLAEDFRLPINHRPTENVDLENVEQASLDTK 60

Query: 241 LTSSNIGFRLLQKMGWKGKGLGKDEQ 318
           LT++NIGFRLLQKMGWKGKGLGKDEQ
Sbjct: 61  LTATNIGFRLLQKMGWKGKGLGKDEQ 86


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