BLASTX nr result
ID: Coptis23_contig00016937
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis23_contig00016937 (320 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CBI39671.3| unnamed protein product [Vitis vinifera] 126 2e-27 ref|XP_003633617.1| PREDICTED: G patch domain-containing protein... 125 4e-27 ref|XP_003554597.1| PREDICTED: G patch domain-containing protein... 122 3e-26 ref|XP_003521644.1| PREDICTED: G patch domain-containing protein... 119 3e-25 ref|XP_002512582.1| nucleic acid binding protein, putative [Rici... 114 6e-24 >emb|CBI39671.3| unnamed protein product [Vitis vinifera] Length = 313 Score = 126 bits (316), Expect = 2e-27 Identities = 61/89 (68%), Positives = 73/89 (82%), Gaps = 5/89 (5%) Frame = +1 Query: 67 MEHKWNCMRQETTAQDEAPGKMEEEY-----DNLGDDFRLPISHKPTENLDLDNVEQATL 231 M+ +W RQET+++D + EE Y ++L +DFRLPI+HKPTEN+DLDNVEQA+L Sbjct: 1 MDRRWYSGRQETSSRDNRQREREEAYKDSLVEDLAEDFRLPINHKPTENVDLDNVEQASL 60 Query: 232 DTQLTSSNIGFRLLQKMGWKGKGLGKDEQ 318 DTQLTSSNIGFRLLQKMGWKGKGLGKDEQ Sbjct: 61 DTQLTSSNIGFRLLQKMGWKGKGLGKDEQ 89 >ref|XP_003633617.1| PREDICTED: G patch domain-containing protein 8-like [Vitis vinifera] Length = 296 Score = 125 bits (314), Expect = 4e-27 Identities = 60/86 (69%), Positives = 73/86 (84%), Gaps = 2/86 (2%) Frame = +1 Query: 67 MEHKWNCMRQETTAQDEAPGKMEEE--YDNLGDDFRLPISHKPTENLDLDNVEQATLDTQ 240 M+ +W RQET+++D + EE+ ++L +DFRLPI+HKPTEN+DLDNVEQA+LDTQ Sbjct: 1 MDRRWYSGRQETSSRDNRQREREEDSLVEDLAEDFRLPINHKPTENVDLDNVEQASLDTQ 60 Query: 241 LTSSNIGFRLLQKMGWKGKGLGKDEQ 318 LTSSNIGFRLLQKMGWKGKGLGKDEQ Sbjct: 61 LTSSNIGFRLLQKMGWKGKGLGKDEQ 86 >ref|XP_003554597.1| PREDICTED: G patch domain-containing protein 8-like [Glycine max] Length = 304 Score = 122 bits (306), Expect = 3e-26 Identities = 58/89 (65%), Positives = 71/89 (79%), Gaps = 5/89 (5%) Frame = +1 Query: 67 MEHKWNCMRQETTAQDEAPGKMEEEY-----DNLGDDFRLPISHKPTENLDLDNVEQATL 231 ME++W RQET +D K E+ Y ++L +DF LPI+H+PTEN+DLDNVEQA+L Sbjct: 1 MEYRWTNGRQETGGRDRRQSKREQAYQDSLIEDLSEDFSLPINHRPTENVDLDNVEQASL 60 Query: 232 DTQLTSSNIGFRLLQKMGWKGKGLGKDEQ 318 DTQ+TSSNIGF+LLQKMGWKGKGLGKDEQ Sbjct: 61 DTQITSSNIGFKLLQKMGWKGKGLGKDEQ 89 >ref|XP_003521644.1| PREDICTED: G patch domain-containing protein 8-like [Glycine max] Length = 304 Score = 119 bits (298), Expect = 3e-25 Identities = 58/89 (65%), Positives = 70/89 (78%), Gaps = 5/89 (5%) Frame = +1 Query: 67 MEHKWNCMRQETTAQDEAPGKMEEEY-----DNLGDDFRLPISHKPTENLDLDNVEQATL 231 ME++ RQET +D K E+ Y ++L DFRLPI+H+PTEN+DLDNVEQA+L Sbjct: 1 MEYRRTSGRQETGGRDRRQSKREQAYQDSLIEDLSQDFRLPINHRPTENVDLDNVEQASL 60 Query: 232 DTQLTSSNIGFRLLQKMGWKGKGLGKDEQ 318 DTQ+TSSNIGF+LLQKMGWKGKGLGKDEQ Sbjct: 61 DTQITSSNIGFKLLQKMGWKGKGLGKDEQ 89 >ref|XP_002512582.1| nucleic acid binding protein, putative [Ricinus communis] gi|223548543|gb|EEF50034.1| nucleic acid binding protein, putative [Ricinus communis] Length = 300 Score = 114 bits (286), Expect = 6e-24 Identities = 53/86 (61%), Positives = 71/86 (82%), Gaps = 2/86 (2%) Frame = +1 Query: 67 MEHKWNCMRQETTAQDEAPGKMEEE--YDNLGDDFRLPISHKPTENLDLDNVEQATLDTQ 240 M+ +W +QET + DE+ ++ ++L +DFRLPI+H+PTEN+DL+NVEQA+LDT+ Sbjct: 1 MDCRWYGSKQETVSHDESQQDRNQDSLIEDLAEDFRLPINHRPTENVDLENVEQASLDTK 60 Query: 241 LTSSNIGFRLLQKMGWKGKGLGKDEQ 318 LT++NIGFRLLQKMGWKGKGLGKDEQ Sbjct: 61 LTATNIGFRLLQKMGWKGKGLGKDEQ 86