BLASTX nr result

ID: Coptis23_contig00016936 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00016936
         (927 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279539.1| PREDICTED: probable signal peptidase complex...   274   2e-71
gb|AFK49171.1| unknown [Lotus japonicus]                              270   4e-70
ref|NP_181525.2| signal peptidase complex subunit 2 [Arabidopsis...   268   1e-69
ref|XP_002881686.1| hypothetical protein ARALYDRAFT_483034 [Arab...   268   2e-69
gb|AFK45880.1| unknown [Medicago truncatula]                          265   1e-68

>ref|XP_002279539.1| PREDICTED: probable signal peptidase complex subunit 2 isoform 1
           [Vitis vinifera] gi|296086093|emb|CBI31534.3| unnamed
           protein product [Vitis vinifera]
          Length = 195

 Score =  274 bits (700), Expect = 2e-71
 Identities = 140/188 (74%), Positives = 160/188 (85%), Gaps = 5/188 (2%)
 Frame = +3

Query: 36  TNKNSKKANLNDQNSIKHLLDESVSEIVMSRGFKEDVKMSNVRLLLGTIIIIVSLVAQFY 215
           +NKN KKANL D +SIKH+LDE VSEIV SRG+ EDV+MSNVRLL+G+IIII++LVAQFY
Sbjct: 8   SNKNPKKANLLDHHSIKHILDEYVSEIVTSRGYVEDVRMSNVRLLMGSIIIIIALVAQFY 67

Query: 216 PKKFPESKNFLISCIGLY-----VLLNVVLQLITYTKEKNAILFTHPLSGSFNSTGLVVS 380
           PKKFPE+++FLI CI LY     +L N +LQLI YTKEKNAILFTHP  G FNSTGLVVS
Sbjct: 68  PKKFPENRDFLIVCILLYPFCCYILFNGLLQLIIYTKEKNAILFTHPPEGFFNSTGLVVS 127

Query: 381 SNLPRYSDLYTLRIASADPKSVSAKEPVEFTKSVTGWFTKDGILVDGLFWKDVEGLISKY 560
           S LPR+SDLYTL IASADPKS +AK+PVEFTKSVT WFT DGILV+GLFWKDVEGLI+ Y
Sbjct: 128 SKLPRFSDLYTLSIASADPKSKAAKDPVEFTKSVTQWFTTDGILVEGLFWKDVEGLINDY 187

Query: 561 TGESRKNK 584
             E +KNK
Sbjct: 188 AREPKKNK 195


>gb|AFK49171.1| unknown [Lotus japonicus]
          Length = 184

 Score =  270 bits (690), Expect = 4e-70
 Identities = 131/182 (71%), Positives = 159/182 (87%)
 Frame = +3

Query: 39  NKNSKKANLNDQNSIKHLLDESVSEIVMSRGFKEDVKMSNVRLLLGTIIIIVSLVAQFYP 218
           +K+ KKANL D NSIKH+LDESVSEIV SRG+ EDV++SNVRLL+GT+II+++L AQFY 
Sbjct: 3   SKSLKKANLLDHNSIKHILDESVSEIVTSRGYVEDVRLSNVRLLVGTVIIVIALFAQFYK 62

Query: 219 KKFPESKNFLISCIGLYVLLNVVLQLITYTKEKNAILFTHPLSGSFNSTGLVVSSNLPRY 398
           KKFPE+++FL++CI LYV+ N VLQLI YTKEKNAILFT+P +GSF STGLVVSS LPR+
Sbjct: 63  KKFPENRDFLLACIALYVIFNGVLQLIIYTKEKNAILFTYPPAGSFTSTGLVVSSKLPRF 122

Query: 399 SDLYTLRIASADPKSVSAKEPVEFTKSVTGWFTKDGILVDGLFWKDVEGLISKYTGESRK 578
           SD+YTL IASADPKS+SA EP   TKSVT WFTKDG+LV+GLFWKDVE LI++YT E +K
Sbjct: 123 SDMYTLTIASADPKSISANEPKHLTKSVTQWFTKDGVLVEGLFWKDVEALIAQYTKEPKK 182

Query: 579 NK 584
           +K
Sbjct: 183 SK 184


>ref|NP_181525.2| signal peptidase complex subunit 2 [Arabidopsis thaliana]
           gi|20140011|sp|P58684.1|SPCS2_ARATH RecName:
           Full=Probable signal peptidase complex subunit 2;
           AltName: Full=Microsomal signal peptidase 25 kDa
           subunit; Short=SPase 25 kDa subunit
           gi|17528956|gb|AAL38688.1| unknown protein [Arabidopsis
           thaliana] gi|20465965|gb|AAM20168.1| unknown protein
           [Arabidopsis thaliana] gi|330254662|gb|AEC09756.1|
           signal peptidase complex subunit 2 [Arabidopsis
           thaliana]
          Length = 192

 Score =  268 bits (685), Expect = 1e-69
 Identities = 133/184 (72%), Positives = 156/184 (84%)
 Frame = +3

Query: 33  TTNKNSKKANLNDQNSIKHLLDESVSEIVMSRGFKEDVKMSNVRLLLGTIIIIVSLVAQF 212
           +TNKN KKANL D +SIKH+LDESVS+IV SRG+KEDV++SN++L+LGTIII+V+LVAQF
Sbjct: 8   STNKNVKKANLLDHHSIKHILDESVSDIVTSRGYKEDVRLSNLKLILGTIIIVVALVAQF 67

Query: 213 YPKKFPESKNFLISCIGLYVLLNVVLQLITYTKEKNAILFTHPLSGSFNSTGLVVSSNLP 392
           Y KKFPE+++FLI CI LYV+LN VLQLI YTKEKNAILFT+P  GSF STGLVVSS LP
Sbjct: 68  YNKKFPENRDFLIGCIALYVVLNAVLQLILYTKEKNAILFTYPPEGSFTSTGLVVSSKLP 127

Query: 393 RYSDLYTLRIASADPKSVSAKEPVEFTKSVTGWFTKDGILVDGLFWKDVEGLISKYTGES 572
           R+SD YTL I SADPKS+SA + V+ TKSVT WFTKDG+LV+GLFWKDVE LI  Y  E 
Sbjct: 128 RFSDQYTLTIDSADPKSISAGKSVQLTKSVTQWFTKDGVLVEGLFWKDVEALIKNYAEEE 187

Query: 573 RKNK 584
            K K
Sbjct: 188 PKKK 191


>ref|XP_002881686.1| hypothetical protein ARALYDRAFT_483034 [Arabidopsis lyrata subsp.
           lyrata] gi|297327525|gb|EFH57945.1| hypothetical protein
           ARALYDRAFT_483034 [Arabidopsis lyrata subsp. lyrata]
          Length = 192

 Score =  268 bits (684), Expect = 2e-69
 Identities = 133/184 (72%), Positives = 156/184 (84%)
 Frame = +3

Query: 33  TTNKNSKKANLNDQNSIKHLLDESVSEIVMSRGFKEDVKMSNVRLLLGTIIIIVSLVAQF 212
           ++NKN KKANL D +SIKH+LDESVS+IV SRG+KEDV++SN++L+LGTIII+V+LVAQF
Sbjct: 8   SSNKNVKKANLLDHHSIKHILDESVSDIVTSRGYKEDVRLSNLKLILGTIIIVVALVAQF 67

Query: 213 YPKKFPESKNFLISCIGLYVLLNVVLQLITYTKEKNAILFTHPLSGSFNSTGLVVSSNLP 392
           Y KKFPE+++FLI CI LYV+LN VLQLI YTKEKNAILFT+P  GSF STGLVVSS LP
Sbjct: 68  YNKKFPENRDFLIGCIALYVVLNAVLQLILYTKEKNAILFTYPPEGSFTSTGLVVSSKLP 127

Query: 393 RYSDLYTLRIASADPKSVSAKEPVEFTKSVTGWFTKDGILVDGLFWKDVEGLISKYTGES 572
           R+SD YTL I SADPKS+SA + VE TKSVT WFTKDG+LV+GLFWKDVE LI  Y  E 
Sbjct: 128 RFSDQYTLTIDSADPKSISAGKSVELTKSVTQWFTKDGVLVEGLFWKDVEALIKNYAEEE 187

Query: 573 RKNK 584
            K K
Sbjct: 188 PKKK 191


>gb|AFK45880.1| unknown [Medicago truncatula]
          Length = 184

 Score =  265 bits (677), Expect = 1e-68
 Identities = 126/181 (69%), Positives = 156/181 (86%)
 Frame = +3

Query: 42  KNSKKANLNDQNSIKHLLDESVSEIVMSRGFKEDVKMSNVRLLLGTIIIIVSLVAQFYPK 221
           K  KKANL D +SIKH+LDES SE++  RG+ EDVK+SN+RLLLG++II+++L AQFY K
Sbjct: 4   KGQKKANLLDHHSIKHILDESASEVITGRGYVEDVKLSNIRLLLGSVIIVIALFAQFYKK 63

Query: 222 KFPESKNFLISCIGLYVLLNVVLQLITYTKEKNAILFTHPLSGSFNSTGLVVSSNLPRYS 401
           KFPE+++FL++CI LYV+ N+VLQLI YTKEKNAILFT+P +GSF STGLVVSS LPR+S
Sbjct: 64  KFPENRDFLLACIALYVVFNLVLQLIIYTKEKNAILFTYPPTGSFTSTGLVVSSKLPRFS 123

Query: 402 DLYTLRIASADPKSVSAKEPVEFTKSVTGWFTKDGILVDGLFWKDVEGLISKYTGESRKN 581
           D+YTL I SADPKSVSA EPV  TKSVT WFTKDG+LV+GLFWK+VE LI++YT E +K+
Sbjct: 124 DMYTLTIESADPKSVSANEPVHLTKSVTQWFTKDGVLVEGLFWKEVEALIAQYTKEPKKS 183

Query: 582 K 584
           K
Sbjct: 184 K 184


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