BLASTX nr result

ID: Coptis23_contig00016932 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00016932
         (544 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN66844.1| hypothetical protein VITISV_002365 [Vitis vinifera]    68   7e-18
ref|XP_003632458.1| PREDICTED: uncharacterized protein LOC100248...    68   3e-16
ref|XP_003611845.1| Guanine nucleotide-binding protein alpha-2 s...    69   1e-15
ref|XP_003611844.1| Guanine nucleotide-binding protein alpha-2 s...    69   1e-15
ref|XP_003537397.1| PREDICTED: uncharacterized protein LOC100820...    67   6e-15

>emb|CAN66844.1| hypothetical protein VITISV_002365 [Vitis vinifera]
          Length = 1056

 Score = 68.2 bits (165), Expect(2) = 7e-18
 Identities = 28/59 (47%), Positives = 49/59 (83%)
 Frame = -3

Query: 539 EEEMEYSFAIEDNGPPLSYELPRAIPVDMKSIPIASVVSLNNFSNELSLPIVQPLADRD 363
           +++  YSFA+E +GPP++Y++PRA+P++++ IP+A+VV+  + S++LSLP+VQPL   D
Sbjct: 8   DDDGPYSFAMEYHGPPVTYDIPRAVPINVEKIPVATVVAQVSLSDKLSLPVVQPLLAPD 66



 Score = 47.4 bits (111), Expect(2) = 7e-18
 Identities = 34/80 (42%), Positives = 42/80 (52%), Gaps = 1/80 (1%)
 Frame = -1

Query: 271 EMILGSDCVVSPTSVIAFEEGSRVSPECELSGECSSSPSGHEQCFELSDVVDRSVELG-L 95
           E+ LGS+  VSPTSVIA+EE +    EC LSGE +SS +      E SD    S EL   
Sbjct: 106 ELDLGSEATVSPTSVIAYEERAAAGHECVLSGELTSSGA-----LEFSDNRYGSSELSDA 160

Query: 94  CNDCNCSGIRTDDNEHSDEL 35
                  G  +   EHS+EL
Sbjct: 161 IKALATVGSSSSSREHSNEL 180


>ref|XP_003632458.1| PREDICTED: uncharacterized protein LOC100248291 [Vitis vinifera]
          Length = 918

 Score = 68.2 bits (165), Expect(2) = 3e-16
 Identities = 28/59 (47%), Positives = 49/59 (83%)
 Frame = -3

Query: 539 EEEMEYSFAIEDNGPPLSYELPRAIPVDMKSIPIASVVSLNNFSNELSLPIVQPLADRD 363
           +++  YSFA+E +GPP++Y++PRA+P++++ IP+A+VV+  + S++LSLP+VQPL   D
Sbjct: 8   DDDGPYSFAMEYHGPPVTYDIPRAVPINVEKIPVATVVAQVSLSDKLSLPVVQPLLAPD 66



 Score = 41.6 bits (96), Expect(2) = 3e-16
 Identities = 24/39 (61%), Positives = 26/39 (66%), Gaps = 2/39 (5%)
 Frame = -1

Query: 271 EMILGSDCVVSPTSVIAFEEGSR--VSPECELSGECSSS 161
           E+ LGS   VSPTSVIAFE GS      EC LSGE +SS
Sbjct: 75  EIKLGSKSTVSPTSVIAFERGSEDDAGHECVLSGELTSS 113


>ref|XP_003611845.1| Guanine nucleotide-binding protein alpha-2 subunit [Medicago
           truncatula] gi|355513180|gb|AES94803.1| Guanine
           nucleotide-binding protein alpha-2 subunit [Medicago
           truncatula]
          Length = 908

 Score = 69.3 bits (168), Expect(2) = 1e-15
 Identities = 31/51 (60%), Positives = 42/51 (82%)
 Frame = -3

Query: 527 EYSFAIEDNGPPLSYELPRAIPVDMKSIPIASVVSLNNFSNELSLPIVQPL 375
           EYSFA+E +GPPL+Y+LPRA+P+ + +IP+A+VVS    S  LSLP+VQPL
Sbjct: 6   EYSFAVEYDGPPLTYDLPRAVPITVDNIPVAAVVSQVPLSETLSLPVVQPL 56



 Score = 38.5 bits (88), Expect(2) = 1e-15
 Identities = 21/37 (56%), Positives = 24/37 (64%)
 Frame = -1

Query: 271 EMILGSDCVVSPTSVIAFEEGSRVSPECELSGECSSS 161
           E+ L S+  VSPTSVIAF+        CELSGE SSS
Sbjct: 78  ELELASERTVSPTSVIAFDHRGSQINVCELSGELSSS 114


>ref|XP_003611844.1| Guanine nucleotide-binding protein alpha-2 subunit [Medicago
           truncatula] gi|355513179|gb|AES94802.1| Guanine
           nucleotide-binding protein alpha-2 subunit [Medicago
           truncatula]
          Length = 907

 Score = 69.3 bits (168), Expect(2) = 1e-15
 Identities = 31/51 (60%), Positives = 42/51 (82%)
 Frame = -3

Query: 527 EYSFAIEDNGPPLSYELPRAIPVDMKSIPIASVVSLNNFSNELSLPIVQPL 375
           EYSFA+E +GPPL+Y+LPRA+P+ + +IP+A+VVS    S  LSLP+VQPL
Sbjct: 6   EYSFAVEYDGPPLTYDLPRAVPITVDNIPVAAVVSQVPLSETLSLPVVQPL 56



 Score = 38.5 bits (88), Expect(2) = 1e-15
 Identities = 21/37 (56%), Positives = 24/37 (64%)
 Frame = -1

Query: 271 EMILGSDCVVSPTSVIAFEEGSRVSPECELSGECSSS 161
           E+ L S+  VSPTSVIAF+        CELSGE SSS
Sbjct: 78  ELELASERTVSPTSVIAFDHRGSQINVCELSGELSSS 114


>ref|XP_003537397.1| PREDICTED: uncharacterized protein LOC100820512 [Glycine max]
          Length = 917

 Score = 67.0 bits (162), Expect(2) = 6e-15
 Identities = 30/51 (58%), Positives = 42/51 (82%)
 Frame = -3

Query: 527 EYSFAIEDNGPPLSYELPRAIPVDMKSIPIASVVSLNNFSNELSLPIVQPL 375
           EYSFA+E +GPPL+ +LPRA+P+ + +IP+A+VVS    S+ LSLP+VQPL
Sbjct: 10  EYSFAVEYDGPPLTCDLPRAVPISVDNIPVAAVVSQVPLSDSLSLPVVQPL 60



 Score = 38.5 bits (88), Expect(2) = 6e-15
 Identities = 25/52 (48%), Positives = 32/52 (61%), Gaps = 5/52 (9%)
 Frame = -1

Query: 262 LGSDCVVSPTSVIAFEEGSRVSPECELSGECSSS-----PSGHEQCFELSDV 122
           L S+  VSPTSVIAFE  +  S   ELSGE SSS      +G++   +LSD+
Sbjct: 79  LASETTVSPTSVIAFEHRASQSNVGELSGELSSSGAFEFSTGNDGSGDLSDL 130


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