BLASTX nr result
ID: Coptis23_contig00016925
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis23_contig00016925
(1043 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002303149.1| predicted protein [Populus trichocarpa] gi|2... 207 2e-71
ref|XP_002530679.1| DNA helicase hus2, putative [Ricinus communi... 204 8e-70
emb|CBI29756.3| unnamed protein product [Vitis vinifera] 209 1e-69
ref|XP_002265586.1| PREDICTED: ATP-dependent DNA helicase Q-like... 209 1e-69
ref|XP_004146283.1| PREDICTED: ATP-dependent DNA helicase Q-like... 183 1e-66
>ref|XP_002303149.1| predicted protein [Populus trichocarpa] gi|222840581|gb|EEE78128.1|
predicted protein [Populus trichocarpa]
Length = 1194
Score = 207 bits (527), Expect(2) = 2e-71
Identities = 108/179 (60%), Positives = 129/179 (72%), Gaps = 6/179 (3%)
Frame = +1
Query: 523 LELNKKVRLLEKHIYSLSMDGEREVSNLSASSAISKNYQYETPAMGAYKIDPLRFNAQVH 702
L+LNK+++ LEK++ D ER+ S+ SAS+ + +N QYETP A KIDP+RF+AQVH
Sbjct: 327 LQLNKQIQQLEKYL----RDEERQKSHFSASTLV-RNLQYETPQSAACKIDPMRFDAQVH 381
Query: 703 IGNEPDN------PDKVAXXXXXXXXXXXXVEREAYIPKFGEVNYIEGSQDKRWSSCDFP 864
+ N+ + P +ERE YIP F EVNYIEGS D +WSS +FP
Sbjct: 382 LRNDLNGYEKWNAPSVSFSSIDSFGVSSVPLEREPYIPSFVEVNYIEGSNDPKWSSTNFP 441
Query: 865 WTRKLEANNKKVFGNRSFRPNQREVINATMSGYDAFVLMPTGGGKSLTYQLPALICGGI 1041
WT+KLEANNKKVFGN SFRPNQREVINATMSGYD FVLMPTGGGKSLTYQLPAL+C GI
Sbjct: 442 WTKKLEANNKKVFGNHSFRPNQREVINATMSGYDVFVLMPTGGGKSLTYQLPALVCPGI 500
Score = 89.7 bits (221), Expect(2) = 2e-71
Identities = 40/80 (50%), Positives = 58/80 (72%)
Frame = +2
Query: 212 TPVIGKNNIEIPDEANIPPELCTQCNHGCKVALCPEAASHLQEMKDMLLSITNELLELID 391
TP +N+ P+E ++PPELC+ C+HG K+ LCPEAA HLQEMKDML++++N+LL
Sbjct: 253 TPTADQNSFIRPEEISVPPELCSNCSHGFKLGLCPEAAKHLQEMKDMLIAVSNDLL---- 308
Query: 392 NVDNVSDRSPEHLEKLRQER 451
DN ++ S ++KLRQ+R
Sbjct: 309 --DNAAELSQAQIDKLRQDR 326
>ref|XP_002530679.1| DNA helicase hus2, putative [Ricinus communis]
gi|223529772|gb|EEF31710.1| DNA helicase hus2, putative
[Ricinus communis]
Length = 1233
Score = 204 bits (518), Expect(2) = 8e-70
Identities = 107/179 (59%), Positives = 129/179 (72%), Gaps = 6/179 (3%)
Frame = +1
Query: 523 LELNKKVRLLEKHIYSLSMDGEREVSNLSASSAISKNYQYETPAMGAYKIDPLRFNAQVH 702
L+LNK+++ LE ++ D ER+ S+ SAS+A ++N+QYETP A KIDP+RF+AQV+
Sbjct: 328 LQLNKQIQQLESYL----RDKERQKSHFSASTA-NQNFQYETPQCAANKIDPMRFDAQVY 382
Query: 703 IGNEP------DNPDKVAXXXXXXXXXXXXVEREAYIPKFGEVNYIEGSQDKRWSSCDFP 864
+ NE + P +ERE YIPKF EVNYIEGS D +WSS +FP
Sbjct: 383 LRNESGGYESWNTPSISFSSVDRFGISSGPIEREPYIPKFVEVNYIEGSNDPKWSSTNFP 442
Query: 865 WTRKLEANNKKVFGNRSFRPNQREVINATMSGYDAFVLMPTGGGKSLTYQLPALICGGI 1041
WT KLEA NKKVFGN SFRPNQREVINATMSG+D FVLMPTGGGKSLTYQLPAL+C GI
Sbjct: 443 WTTKLEAYNKKVFGNHSFRPNQREVINATMSGFDVFVLMPTGGGKSLTYQLPALVCPGI 501
Score = 87.4 bits (215), Expect(2) = 8e-70
Identities = 43/87 (49%), Positives = 58/87 (66%)
Frame = +2
Query: 191 SSELRASTPVIGKNNIEIPDEANIPPELCTQCNHGCKVALCPEAASHLQEMKDMLLSITN 370
+S+ + TP K+N DE +P ELC CNHG K+ LCPEA +HLQEMKDML++++N
Sbjct: 247 NSKFPSITPTADKHNFARSDEMFLPTELCQNCNHGFKLGLCPEAGNHLQEMKDMLIAVSN 306
Query: 371 ELLELIDNVDNVSDRSPEHLEKLRQER 451
ELL DN ++ S +EKLRQ+R
Sbjct: 307 ELL------DNSTNLSSVQIEKLRQDR 327
>emb|CBI29756.3| unnamed protein product [Vitis vinifera]
Length = 1235
Score = 209 bits (531), Expect(2) = 1e-69
Identities = 111/179 (62%), Positives = 131/179 (73%), Gaps = 6/179 (3%)
Frame = +1
Query: 523 LELNKKVRLLEKHIYSLSMDGEREVSNLSASSAISKNYQYETPAMGAYKIDPLRFNAQVH 702
L LNK+++ LE H++S+S+D ER+ SN SAS+ + Q++TP A IDP+RF+AQVH
Sbjct: 303 LYLNKQIQQLEIHLHSVSVDEERKNSNFSASTT-TPWAQFQTPPATAVGIDPMRFDAQVH 361
Query: 703 IGNEPDNPDK------VAXXXXXXXXXXXXVEREAYIPKFGEVNYIEGSQDKRWSSCDFP 864
+ NEP N +K +ERE YIPK EVNYIEGS DK+WSS +FP
Sbjct: 362 LRNEPGNYEKWNTSSVSFSSIDRFGVTPYPLEREPYIPKLIEVNYIEGSSDKKWSSGNFP 421
Query: 865 WTRKLEANNKKVFGNRSFRPNQREVINATMSGYDAFVLMPTGGGKSLTYQLPALICGGI 1041
WT+KLEANNKKVFGN SFRPNQREVINATMSGYD FVLMPTGGGKSLTYQLPALI GI
Sbjct: 422 WTKKLEANNKKVFGNHSFRPNQREVINATMSGYDVFVLMPTGGGKSLTYQLPALISPGI 480
Score = 82.0 bits (201), Expect(2) = 1e-69
Identities = 45/86 (52%), Positives = 58/86 (67%)
Frame = +2
Query: 194 SELRASTPVIGKNNIEIPDEANIPPELCTQCNHGCKVALCPEAASHLQEMKDMLLSITNE 373
S+L TP + NI +E +P ELC+ C+HG K+ LCPEAA+HLQE+KDML+ I+NE
Sbjct: 224 SKLPPVTPTLSTVNIAKHEETFLPLELCSNCSHGFKLGLCPEAANHLQELKDMLIVISNE 283
Query: 374 LLELIDNVDNVSDRSPEHLEKLRQER 451
LL DNVD S +EKLRQ+R
Sbjct: 284 LL---DNVDLTS----VQVEKLRQDR 302
>ref|XP_002265586.1| PREDICTED: ATP-dependent DNA helicase Q-like 4A-like [Vitis vinifera]
Length = 1224
Score = 209 bits (531), Expect(2) = 1e-69
Identities = 111/179 (62%), Positives = 131/179 (73%), Gaps = 6/179 (3%)
Frame = +1
Query: 523 LELNKKVRLLEKHIYSLSMDGEREVSNLSASSAISKNYQYETPAMGAYKIDPLRFNAQVH 702
L LNK+++ LE H++S+S+D ER+ SN SAS+ + Q++TP A IDP+RF+AQVH
Sbjct: 292 LYLNKQIQQLEIHLHSVSVDEERKNSNFSASTT-TPWAQFQTPPATAVGIDPMRFDAQVH 350
Query: 703 IGNEPDNPDK------VAXXXXXXXXXXXXVEREAYIPKFGEVNYIEGSQDKRWSSCDFP 864
+ NEP N +K +ERE YIPK EVNYIEGS DK+WSS +FP
Sbjct: 351 LRNEPGNYEKWNTSSVSFSSIDRFGVTPYPLEREPYIPKLIEVNYIEGSSDKKWSSGNFP 410
Query: 865 WTRKLEANNKKVFGNRSFRPNQREVINATMSGYDAFVLMPTGGGKSLTYQLPALICGGI 1041
WT+KLEANNKKVFGN SFRPNQREVINATMSGYD FVLMPTGGGKSLTYQLPALI GI
Sbjct: 411 WTKKLEANNKKVFGNHSFRPNQREVINATMSGYDVFVLMPTGGGKSLTYQLPALISPGI 469
Score = 82.0 bits (201), Expect(2) = 1e-69
Identities = 45/86 (52%), Positives = 58/86 (67%)
Frame = +2
Query: 194 SELRASTPVIGKNNIEIPDEANIPPELCTQCNHGCKVALCPEAASHLQEMKDMLLSITNE 373
S+L TP + NI +E +P ELC+ C+HG K+ LCPEAA+HLQE+KDML+ I+NE
Sbjct: 213 SKLPPVTPTLSTVNIAKHEETFLPLELCSNCSHGFKLGLCPEAANHLQELKDMLIVISNE 272
Query: 374 LLELIDNVDNVSDRSPEHLEKLRQER 451
LL DNVD S +EKLRQ+R
Sbjct: 273 LL---DNVDLTS----VQVEKLRQDR 291
>ref|XP_004146283.1| PREDICTED: ATP-dependent DNA helicase Q-like 4A-like, partial
[Cucumis sativus] gi|449511185|ref|XP_004163888.1|
PREDICTED: ATP-dependent DNA helicase Q-like 4A-like,
partial [Cucumis sativus]
Length = 1269
Score = 183 bits (464), Expect(2) = 1e-66
Identities = 97/178 (54%), Positives = 120/178 (67%), Gaps = 5/178 (2%)
Frame = +1
Query: 523 LELNKKVRLLEKHIYSLSMDGEREVSNLSASSAISKNYQYETPAMGAYKIDPLRFNAQVH 702
+ LNK+++LLE+HI +++ ER S+L A++ K + +ETP ++ D + VH
Sbjct: 382 VHLNKQIQLLERHISLDAVNEERRRSHLFATTVTPKTFHFETPPGVEFRTDAKLNTSYVH 441
Query: 703 IGNEPD-----NPDKVAXXXXXXXXXXXXVEREAYIPKFGEVNYIEGSQDKRWSSCDFPW 867
EP N + VERE YIPK +VNYIEGS DK+WSS +F W
Sbjct: 442 QDFEPRRIEPWNSMGSSYVDERFGMSSGPVEREPYIPKVIDVNYIEGSNDKKWSSRNFSW 501
Query: 868 TRKLEANNKKVFGNRSFRPNQREVINATMSGYDAFVLMPTGGGKSLTYQLPALICGGI 1041
T++LEANNKKVFGN SFRPNQREVINATMSGYD FVLMPTGGGKSLTYQLPALIC G+
Sbjct: 502 TKELEANNKKVFGNHSFRPNQREVINATMSGYDVFVLMPTGGGKSLTYQLPALICPGV 559
Score = 97.8 bits (242), Expect(2) = 1e-66
Identities = 47/86 (54%), Positives = 64/86 (74%)
Frame = +2
Query: 194 SELRASTPVIGKNNIEIPDEANIPPELCTQCNHGCKVALCPEAASHLQEMKDMLLSITNE 373
S+L TP+I K+N+ +E+N P ELCT C+HG K+ LCPEA+SHLQE+KD L+SI+N+
Sbjct: 302 SKLPPITPIIEKDNVARQEESNYPDELCTNCSHGFKIELCPEASSHLQELKDRLISISND 361
Query: 374 LLELIDNVDNVSDRSPEHLEKLRQER 451
LL DNV++ SP ++KLRQER
Sbjct: 362 LL------DNVNNLSPVQIDKLRQER 381