BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00016920
         (1555 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABD28730.1| Ribonuclease H [Medicago truncatula]                    44   6e-07

>gb|ABD28730.1| Ribonuclease H [Medicago truncatula]
          Length = 409

 Score = 43.5 bits (101), Expect(2) = 6e-07
 Identities = 24/93 (25%), Positives = 41/93 (44%), Gaps = 6/93 (6%)
 Frame = -3

Query: 1076 FIPWKLLHNCAATDAVAQRKGVKLASRCFVCLCHC----EDLKHLLWDCILARNLWRWIA 909
            FI W+ LHN   TD   +++G  + S   +C C C    E   H+   C +   LW W+ 
Sbjct: 86   FITWRFLHNKLPTDDNLRKRGCYIVS---ICCCFCRKQAETSSHIFLQCPVTLQLWDWLL 142

Query: 908  NQFQFSSNFHNIQEAITLGKH--TSSYISNLWT 816
                   +F +I     + +H   S+ +  +W+
Sbjct: 143  KATDQHLDFSSILNISRMVQHVMNSAIVHIMWS 175



 Score = 37.7 bits (86), Expect(2) = 6e-07
 Identities = 28/84 (33%), Positives = 41/84 (48%), Gaps = 3/84 (3%)
 Frame = -2

Query: 1311 KVSDLIVNSEWFIPH---QVQNTLMEAGMHEFQLPPLNLQGNDYRI*TPGLKGQFSVLFA 1141
            KV++ +VN EW +        N L+E  +H+  LP L+ +  D  I T  + G  S   A
Sbjct: 2    KVANYLVNGEWILSDFFAYKDNALVEK-IHQIALP-LD-ETLDKLIWTDSVDGDLSNKLA 58

Query: 1140 FNDIRKSGPKVGWFKAIWNKSIHP 1069
            F+ +   GP V W K +WN    P
Sbjct: 59   FSFLPGHGPTVHWAKMLWNAYTPP 82