BLASTX nr result

ID: Coptis23_contig00016912 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00016912
         (1299 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272856.2| PREDICTED: uncharacterized protein LOC100249...   449   e-124
emb|CBI16640.3| unnamed protein product [Vitis vinifera]              449   e-124
ref|XP_002325560.1| predicted protein [Populus trichocarpa] gi|2...   421   e-115
gb|AFK40437.1| unknown [Medicago truncatula]                          414   e-113
ref|XP_003615184.1| Protein AATF [Medicago truncatula] gi|355516...   411   e-112

>ref|XP_002272856.2| PREDICTED: uncharacterized protein LOC100249550 [Vitis vinifera]
          Length = 1369

 Score =  449 bits (1155), Expect = e-124
 Identities = 228/325 (70%), Positives = 266/325 (81%), Gaps = 1/325 (0%)
 Frame = +2

Query: 62   RDAEMEELEKEYNNLRDEEPDILINLNRHKDEDLLKGQAVNNQKAIWDKSLELRFLLQKV 241
            +DAEMEELEKEY  L+++E D+L NL  HKDEDLLKGQAV NQKA+WDK+LE RFLLQK 
Sbjct: 1036 KDAEMEELEKEYMELQNKEQDLLKNLRSHKDEDLLKGQAVKNQKALWDKTLEFRFLLQKA 1095

Query: 242  FTSSNKLPREPLRSLFCSSDEEVNKAYSDLMTSSEKALDSLLGLQEALLEKNPSIVQVSD 421
            F+SSN+LP+EP RS FC SDE VN AYSDL+TSS+K LDSLL LQEALL+KNPSI Q ++
Sbjct: 1096 FSSSNRLPQEPDRSSFCDSDEGVNVAYSDLITSSKKTLDSLLELQEALLDKNPSITQATN 1155

Query: 422  GNK-KGFTGTDVPKNFVGEKDKEWFRIQEMHSRLAPFRDNSIDKWQRRAQVTTGVAGFKG 598
            GN  +   G +  KN   + D+EW +I +MHSR+APFRD SIDKWQR+ +V+TG A  KG
Sbjct: 1156 GNPGQSSKGLETSKNLDVKGDEEWQQIYQMHSRIAPFRDKSIDKWQRKTEVSTGAAAIKG 1215

Query: 599  KLKAFSQNSSEQVAAHMRDPSRLIKRMHLRRPLVGVFGSVTDVSDKVNEESVNADGDPEL 778
            KL+AF+QN SEQVAA+MRDPSR+IK+M LRR  VG+FG+V D      EE V+ADGDPEL
Sbjct: 1216 KLRAFNQNISEQVAAYMRDPSRMIKQMQLRRSTVGIFGAVPDDVGSSREEEVHADGDPEL 1275

Query: 779  LDDSEFYQQLLKEFLESSNPESSEAAFYALKRQQTKKRKIVDRRASKSRKIRYHVHEKIV 958
            LDDSEFYQQLLKEF E+ +P SSE AFYAL+R +TKKRKIVDRRASKSRKIRYHVHEKIV
Sbjct: 1276 LDDSEFYQQLLKEFFETFDPNSSETAFYALQRLKTKKRKIVDRRASKSRKIRYHVHEKIV 1335

Query: 959  SFMAPDRMNLPEMAPILFQNLFGLK 1033
            +FMAP  MNLP MAP LF NLFGLK
Sbjct: 1336 NFMAPQPMNLPPMAPKLFDNLFGLK 1360


>emb|CBI16640.3| unnamed protein product [Vitis vinifera]
          Length = 391

 Score =  449 bits (1155), Expect = e-124
 Identities = 228/325 (70%), Positives = 266/325 (81%), Gaps = 1/325 (0%)
 Frame = +2

Query: 62   RDAEMEELEKEYNNLRDEEPDILINLNRHKDEDLLKGQAVNNQKAIWDKSLELRFLLQKV 241
            +DAEMEELEKEY  L+++E D+L NL  HKDEDLLKGQAV NQKA+WDK+LE RFLLQK 
Sbjct: 58   KDAEMEELEKEYMELQNKEQDLLKNLRSHKDEDLLKGQAVKNQKALWDKTLEFRFLLQKA 117

Query: 242  FTSSNKLPREPLRSLFCSSDEEVNKAYSDLMTSSEKALDSLLGLQEALLEKNPSIVQVSD 421
            F+SSN+LP+EP RS FC SDE VN AYSDL+TSS+K LDSLL LQEALL+KNPSI Q ++
Sbjct: 118  FSSSNRLPQEPDRSSFCDSDEGVNVAYSDLITSSKKTLDSLLELQEALLDKNPSITQATN 177

Query: 422  GNK-KGFTGTDVPKNFVGEKDKEWFRIQEMHSRLAPFRDNSIDKWQRRAQVTTGVAGFKG 598
            GN  +   G +  KN   + D+EW +I +MHSR+APFRD SIDKWQR+ +V+TG A  KG
Sbjct: 178  GNPGQSSKGLETSKNLDVKGDEEWQQIYQMHSRIAPFRDKSIDKWQRKTEVSTGAAAIKG 237

Query: 599  KLKAFSQNSSEQVAAHMRDPSRLIKRMHLRRPLVGVFGSVTDVSDKVNEESVNADGDPEL 778
            KL+AF+QN SEQVAA+MRDPSR+IK+M LRR  VG+FG+V D      EE V+ADGDPEL
Sbjct: 238  KLRAFNQNISEQVAAYMRDPSRMIKQMQLRRSTVGIFGAVPDDVGSSREEEVHADGDPEL 297

Query: 779  LDDSEFYQQLLKEFLESSNPESSEAAFYALKRQQTKKRKIVDRRASKSRKIRYHVHEKIV 958
            LDDSEFYQQLLKEF E+ +P SSE AFYAL+R +TKKRKIVDRRASKSRKIRYHVHEKIV
Sbjct: 298  LDDSEFYQQLLKEFFETFDPNSSETAFYALQRLKTKKRKIVDRRASKSRKIRYHVHEKIV 357

Query: 959  SFMAPDRMNLPEMAPILFQNLFGLK 1033
            +FMAP  MNLP MAP LF NLFGLK
Sbjct: 358  NFMAPQPMNLPPMAPKLFDNLFGLK 382


>ref|XP_002325560.1| predicted protein [Populus trichocarpa] gi|222862435|gb|EEE99941.1|
            predicted protein [Populus trichocarpa]
          Length = 372

 Score =  421 bits (1083), Expect = e-115
 Identities = 211/324 (65%), Positives = 258/324 (79%)
 Frame = +2

Query: 62   RDAEMEELEKEYNNLRDEEPDILINLNRHKDEDLLKGQAVNNQKAIWDKSLELRFLLQKV 241
            +D EME+LEKEY NLR++E DI  NL RHKDEDL+KGQAV NQKA+WDK+LE RFLLQK 
Sbjct: 48   KDGEMEDLEKEYMNLRNQEQDIWKNLKRHKDEDLIKGQAVKNQKALWDKTLEFRFLLQKA 107

Query: 242  FTSSNKLPREPLRSLFCSSDEEVNKAYSDLMTSSEKALDSLLGLQEALLEKNPSIVQVSD 421
            F +SN+LP+EP+RS FC SDE V  AY+D++TSS+K L+SLL LQEALLEKNPSI Q S+
Sbjct: 108  FANSNRLPQEPVRSSFCDSDEVVGMAYADVITSSKKTLESLLELQEALLEKNPSISQSSN 167

Query: 422  GNKKGFTGTDVPKNFVGEKDKEWFRIQEMHSRLAPFRDNSIDKWQRRAQVTTGVAGFKGK 601
            G  +     D   N   E+D +W RI EM  R+APFR+ SIDKWQR+ QVTTG A   GK
Sbjct: 168  GILQMLHSKD-STNSDAEEDIDWLRISEMQKRIAPFRNKSIDKWQRKTQVTTGAAAMTGK 226

Query: 602  LKAFSQNSSEQVAAHMRDPSRLIKRMHLRRPLVGVFGSVTDVSDKVNEESVNADGDPELL 781
            L+AF+QN SEQVAA+MRDP++++++M  RR  +GVFG+V +++     E    DGDPELL
Sbjct: 227  LQAFNQNISEQVAAYMRDPTKMVRQMQQRRSTIGVFGAVPELTSNARGEETCPDGDPELL 286

Query: 782  DDSEFYQQLLKEFLESSNPESSEAAFYALKRQQTKKRKIVDRRASKSRKIRYHVHEKIVS 961
            +D+EFYQQLLKEFLE+ +P S+EA FYALKR QTKKRKIVDRRASKSRKIRY+VHEKIV+
Sbjct: 287  NDTEFYQQLLKEFLENVDPSSTEATFYALKRLQTKKRKIVDRRASKSRKIRYNVHEKIVN 346

Query: 962  FMAPDRMNLPEMAPILFQNLFGLK 1033
            FMAP  MN+P MAP +F+NLFGLK
Sbjct: 347  FMAPQPMNIPPMAPKVFENLFGLK 370


>gb|AFK40437.1| unknown [Medicago truncatula]
          Length = 397

 Score =  414 bits (1063), Expect = e-113
 Identities = 209/342 (61%), Positives = 261/342 (76%), Gaps = 2/342 (0%)
 Frame = +2

Query: 38   NGKVKMATRDAEMEELEKEYNNLRDEEPDI--LINLNRHKDEDLLKGQAVNNQKAIWDKS 211
            +G+ +   RD EME+LEKEY +L  +E ++  L NL  HKDEDLLKGQAV +QKA+W K 
Sbjct: 55   DGQEENGWRDDEMEQLEKEYKDLHHQEQELNTLKNLKHHKDEDLLKGQAVKSQKALWYKI 114

Query: 212  LELRFLLQKVFTSSNKLPREPLRSLFCSSDEEVNKAYSDLMTSSEKALDSLLGLQEALLE 391
            LELRFLLQK F++SN+LP+E ++  FC SDE V  AY DL+TSS++ LDS+L LQEAL+ 
Sbjct: 115  LELRFLLQKPFSNSNRLPQESIKESFCESDETVRGAYEDLITSSKETLDSILELQEALIA 174

Query: 392  KNPSIVQVSDGNKKGFTGTDVPKNFVGEKDKEWFRIQEMHSRLAPFRDNSIDKWQRRAQV 571
            KNPS+ Q S+G+++     ++        D+EW +I  MH  +A FRD SI+KWQR  QV
Sbjct: 175  KNPSVAQASNGSERSSKDLEISNILDDNPDQEWSQISRMHHSMATFRDKSINKWQRMTQV 234

Query: 572  TTGVAGFKGKLKAFSQNSSEQVAAHMRDPSRLIKRMHLRRPLVGVFGSVTDVSDKVNEES 751
            TTG A  KGKL AF+Q+ S QVAA+MRDPSR+IK+M LRR ++ +FGSV +V+D  NE  
Sbjct: 235  TTGAAAIKGKLHAFNQDISHQVAAYMRDPSRMIKQMQLRRSVIKIFGSVAEVNDNSNESE 294

Query: 752  VNADGDPELLDDSEFYQQLLKEFLESSNPESSEAAFYALKRQQTKKRKIVDRRASKSRKI 931
             +ADGDPELLDDSEFYQQLLKEF E+ +P SSE AFYALKR QTKKRKIVDRRASKSRKI
Sbjct: 295  THADGDPELLDDSEFYQQLLKEFFETIDPSSSEKAFYALKRMQTKKRKIVDRRASKSRKI 354

Query: 932  RYHVHEKIVSFMAPDRMNLPEMAPILFQNLFGLKRPKSTSVA 1057
            RY+VHEKIV+FMAP   NLP MAP+LF +LFGLK  +S++ A
Sbjct: 355  RYNVHEKIVNFMAPRPANLPPMAPMLFDDLFGLKTQRSSAAA 396


>ref|XP_003615184.1| Protein AATF [Medicago truncatula] gi|355516519|gb|AES98142.1|
            Protein AATF [Medicago truncatula]
          Length = 397

 Score =  411 bits (1056), Expect = e-112
 Identities = 207/334 (61%), Positives = 257/334 (76%), Gaps = 2/334 (0%)
 Frame = +2

Query: 62   RDAEMEELEKEYNNLRDEEPDI--LINLNRHKDEDLLKGQAVNNQKAIWDKSLELRFLLQ 235
            +D EME+LEKEY +L  +E ++  L NL  HKDEDLLKGQAV  QKA+W K LELRFLLQ
Sbjct: 63   KDDEMEQLEKEYMDLHHQEQELNTLKNLKHHKDEDLLKGQAVKAQKALWYKILELRFLLQ 122

Query: 236  KVFTSSNKLPREPLRSLFCSSDEEVNKAYSDLMTSSEKALDSLLGLQEALLEKNPSIVQV 415
            K F+SSN+LP+E ++  FC SDE V  AY DL+TSS++ LDS+L LQEAL+ KNPS+ Q 
Sbjct: 123  KPFSSSNRLPQESIKESFCESDETVRGAYEDLITSSKETLDSILELQEALIAKNPSVAQA 182

Query: 416  SDGNKKGFTGTDVPKNFVGEKDKEWFRIQEMHSRLAPFRDNSIDKWQRRAQVTTGVAGFK 595
            S+G ++     ++  +     D+EW +I +MH+ +A FRD SI+KWQR  QVTTG A  K
Sbjct: 183  SNGTERSSKDLEISNDLDDNLDQEWAQISQMHNSMATFRDKSINKWQRMTQVTTGAAAIK 242

Query: 596  GKLKAFSQNSSEQVAAHMRDPSRLIKRMHLRRPLVGVFGSVTDVSDKVNEESVNADGDPE 775
            GKL AF+Q+ S QVAA+MRDPSR+IK+M LRR  + +FGSV +V+D  NE   +ADGDPE
Sbjct: 243  GKLHAFNQDISHQVAAYMRDPSRMIKQMQLRRSAIKIFGSVAEVNDSSNEPETHADGDPE 302

Query: 776  LLDDSEFYQQLLKEFLESSNPESSEAAFYALKRQQTKKRKIVDRRASKSRKIRYHVHEKI 955
            LLDDSEFYQQLLKEF E+ +P SSE AFYA+KR QTKKRKIVDRRASKSRKIRY+VHEKI
Sbjct: 303  LLDDSEFYQQLLKEFFETIDPSSSEKAFYAMKRMQTKKRKIVDRRASKSRKIRYNVHEKI 362

Query: 956  VSFMAPDRMNLPEMAPILFQNLFGLKRPKSTSVA 1057
            V+FMAP   NLP MAP+LF +LFGLK  +S++ A
Sbjct: 363  VNFMAPRPANLPPMAPMLFDDLFGLKTQRSSAAA 396


Top