BLASTX nr result

ID: Coptis23_contig00016909 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00016909
         (886 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002514137.1| leucine-rich repeat-containing protein 2, lr...   145   2e-32
ref|XP_002279295.1| PREDICTED: disease resistance protein RPS2 [...   138   2e-30
emb|CBI33408.3| unnamed protein product [Vitis vinifera]              137   3e-30
ref|XP_002270572.1| PREDICTED: probable disease resistance prote...   137   3e-30
ref|XP_002281592.1| PREDICTED: probable disease resistance prote...   135   1e-29

>ref|XP_002514137.1| leucine-rich repeat-containing protein 2, lrrc2, putative [Ricinus
            communis] gi|223546593|gb|EEF48091.1| leucine-rich
            repeat-containing protein 2, lrrc2, putative [Ricinus
            communis]
          Length = 877

 Score =  145 bits (365), Expect = 2e-32
 Identities = 102/301 (33%), Positives = 152/301 (50%), Gaps = 6/301 (1%)
 Frame = -1

Query: 886  LKKIHPNFFQSMPLLKFLDLSSTSISYLPPSIGDLARLEFLDLSDTKIKELPSEIMKLEN 707
            L +I   +F  MP L+ LDLS TS+  LP SI  L  L+ LDLS TKI  LP E+  L  
Sbjct: 535  LSRIPDTYFLLMPSLRVLDLSLTSLRELPASINRLVELQHLDLSGTKITALPKELGHLSK 594

Query: 706  LKYLSFKMTEKLHQIQPGVIAHLSNLQMLKQLW---GW*RDGDE-ALQASIQELACLKQM 539
            LK+L  +    L  I    ++ L  L++L   +   GW  +  E A +    +L CLK +
Sbjct: 595  LKHLDLQRATSLRTIPQQALSGLLQLRVLNFYYSYAGWGGNNSETAKEVGFADLECLKHL 654

Query: 538  NALEILISNVKFLESFLSYPRLVLCTRSLSIESCKDLISLALSS-FEYMKRLQKFVIGDC 362
              L I I   K L+    +  L+   + L I+ CK L  L +SS   Y K L++  I +C
Sbjct: 655  TTLGITIKESKMLKKLGIFSSLLNTIQYLYIKECKRLFCLQISSNTSYGKNLRRLSINNC 714

Query: 361  SEMKELIIDCSTKTAGVELFQSLEIMVFSALPRLVISWDINIPHAACFKNLHALFLDQCD 182
             ++K L +D   + AG +   SLE++    LP LV+ W  N     C +NL ++ +  C 
Sbjct: 715  YDLKYLEVD---EEAGDKWLLSLEVLALHGLPSLVVVWK-NPVTRECLQNLRSVNIWHCH 770

Query: 181  MLVNLTWLFLTPNIRVLHVKRCLRIEEIISDEFGAFGA-SLFSKLATLVLDDLPCLWSIC 5
             L  ++W+F   N+  L++  C  +EE++S E     A   F  L TL + +LP L SI 
Sbjct: 771  KLKEVSWVFQLQNLEFLYLMYCNEMEEVVSRENMPMEAPKAFPSLKTLSIRNLPKLRSIA 830

Query: 4    R 2
            +
Sbjct: 831  Q 831


>ref|XP_002279295.1| PREDICTED: disease resistance protein RPS2 [Vitis vinifera]
          Length = 903

 Score =  138 bits (347), Expect = 2e-30
 Identities = 100/302 (33%), Positives = 148/302 (49%), Gaps = 9/302 (2%)
 Frame = -1

Query: 886  LKKIHPNFFQSMPLLKFLDLSSTSISYLPPSIGDLARLEFLDLSDTKIKELPSEIMKLEN 707
            L +I   FF  MP+L+ LDLS TS+  +P SIG+L  L  LDLS TK+  LP E+  L  
Sbjct: 542  LNRITVGFFHFMPVLRVLDLSFTSLKEIPVSIGELVELRHLDLSGTKLTALPKELGSLAK 601

Query: 706  LKYLSFKMTEKLHQIQPGVIAHLSNLQMLKQLWGW*RDGDEAL-------QASIQELACL 548
            L+ L  + T  L  I    I+ LS L++L   + +   G EAL        AS  +L  L
Sbjct: 602  LRLLDLQRTHSLRTIPHEAISRLSQLRVLNFYYSY--GGWEALNCDAPESDASFADLEGL 659

Query: 547  KQMNALEILISNVKFLESFLSYPRLVLCTRSLSIESCKDLISLALSSFE-YMKRLQKFVI 371
            + ++ L I +     L        L+ C + L I+ C+ L  L  SS     K+L++  I
Sbjct: 660  RHLSTLGITVIESTTLRRLSRLNTLLKCIKYLYIKECEGLFYLQFSSASGDGKKLRRLSI 719

Query: 370  GDCSEMKELIIDCSTKTAGVELFQSLEIMVFSALPRLVISWDINIPHAACFKNLHALFLD 191
             +C ++K L I      AG     SLE++    LP L   W  ++    C +NL ++ + 
Sbjct: 720  NNCYDLKYLAIGVG---AGRNWLPSLEVLSLHGLPNLTRVWRNSVTR-ECLQNLRSISIW 775

Query: 190  QCDMLVNLTWLFLTPNIRVLHVKRCLRIEEII-SDEFGAFGASLFSKLATLVLDDLPCLW 14
             C  L N++W+   P + VL++  C  +EE+I  DE        F  L T+ + DLP L 
Sbjct: 776  YCHKLKNVSWILQLPRLEVLYIFYCSEMEELICGDEMIEEDLMAFPSLRTMSIRDLPQLR 835

Query: 13   SI 8
            SI
Sbjct: 836  SI 837


>emb|CBI33408.3| unnamed protein product [Vitis vinifera]
          Length = 721

 Score =  137 bits (346), Expect = 3e-30
 Identities = 105/304 (34%), Positives = 152/304 (50%), Gaps = 9/304 (2%)
 Frame = -1

Query: 886  LKKIHPNFFQSMPLLKFLDLSSTSISYLPPSIGDLARLEFLDLSDTKIKELPSEIMKLEN 707
            L+ I   FFQ MP L+ L LS+T I  LP  I +L  L++LDLS T+IK+LP E+  L  
Sbjct: 374  LQMISNGFFQFMPNLRVLSLSNTKIVELPSDISNLVSLQYLDLSGTEIKKLPIEMKNLVQ 433

Query: 706  LKYLSFKMTEKLHQIQPGVIAHLSNLQMLKQ----LWGW*RDG---DEALQASIQELACL 548
            LK L    T K+  I  G+I+ L  LQ +      L+    +G       ++ ++EL  L
Sbjct: 434  LKIL-ILCTSKVSSIPRGLISSLLMLQAVGMYNCGLYDQVAEGGVESYGKESLVEELESL 492

Query: 547  KQMNALEILISNVKFLESFLSYPRLVLCTRSLSIESCKDLISLALSSFEYMKRLQKFVIG 368
            K +  L + I++   L+ FLS  +L  CT  + +E  K   SL LSS E MK L    + 
Sbjct: 493  KYLTHLTVTIASASVLKRFLSSRKLPSCTVGICLEMFKGSSSLNLSSLENMKHLYALTMK 552

Query: 367  DCSEMKELIIDCSTKTAGVELFQSLEIMVFSALPRLVISWDINIPHAACFKNLHALFLDQ 188
            D   ++E+  D + K          E M +S+L           P   CF  L  + +++
Sbjct: 553  DLDSLREIKFDWAGK--------GKETMGYSSLN----------PKVKCFHGLREVAINR 594

Query: 187  CDMLVNLTWLFLTPNIRVLHVKRCLRIEEIISD--EFGAFGASLFSKLATLVLDDLPCLW 14
            C ML NLTWL   PN+  L + +C  +EE+I    E G    S F+KL  L L+ LP L 
Sbjct: 595  CQMLKNLTWLIFAPNLLYLKIGQCDEMEEVIGKGAEDGG-NLSPFTKLIQLELNGLPQLK 653

Query: 13   SICR 2
            ++ R
Sbjct: 654  NVYR 657


>ref|XP_002270572.1| PREDICTED: probable disease resistance protein At5g63020-like [Vitis
            vinifera]
          Length = 897

 Score =  137 bits (346), Expect = 3e-30
 Identities = 105/304 (34%), Positives = 152/304 (50%), Gaps = 9/304 (2%)
 Frame = -1

Query: 886  LKKIHPNFFQSMPLLKFLDLSSTSISYLPPSIGDLARLEFLDLSDTKIKELPSEIMKLEN 707
            L+ I   FFQ MP L+ L LS+T I  LP  I +L  L++LDLS T+IK+LP E+  L  
Sbjct: 550  LQMISNGFFQFMPNLRVLSLSNTKIVELPSDISNLVSLQYLDLSGTEIKKLPIEMKNLVQ 609

Query: 706  LKYLSFKMTEKLHQIQPGVIAHLSNLQMLKQ----LWGW*RDG---DEALQASIQELACL 548
            LK L    T K+  I  G+I+ L  LQ +      L+    +G       ++ ++EL  L
Sbjct: 610  LKIL-ILCTSKVSSIPRGLISSLLMLQAVGMYNCGLYDQVAEGGVESYGKESLVEELESL 668

Query: 547  KQMNALEILISNVKFLESFLSYPRLVLCTRSLSIESCKDLISLALSSFEYMKRLQKFVIG 368
            K +  L + I++   L+ FLS  +L  CT  + +E  K   SL LSS E MK L    + 
Sbjct: 669  KYLTHLTVTIASASVLKRFLSSRKLPSCTVGICLEMFKGSSSLNLSSLENMKHLYALTMK 728

Query: 367  DCSEMKELIIDCSTKTAGVELFQSLEIMVFSALPRLVISWDINIPHAACFKNLHALFLDQ 188
            D   ++E+  D + K          E M +S+L           P   CF  L  + +++
Sbjct: 729  DLDSLREIKFDWAGK--------GKETMGYSSLN----------PKVKCFHGLREVAINR 770

Query: 187  CDMLVNLTWLFLTPNIRVLHVKRCLRIEEIISD--EFGAFGASLFSKLATLVLDDLPCLW 14
            C ML NLTWL   PN+  L + +C  +EE+I    E G    S F+KL  L L+ LP L 
Sbjct: 771  CQMLKNLTWLIFAPNLLYLKIGQCDEMEEVIGKGAEDGG-NLSPFTKLIQLELNGLPQLK 829

Query: 13   SICR 2
            ++ R
Sbjct: 830  NVYR 833


>ref|XP_002281592.1| PREDICTED: probable disease resistance protein At5g63020-like [Vitis
            vinifera]
          Length = 893

 Score =  135 bits (340), Expect = 1e-29
 Identities = 104/300 (34%), Positives = 155/300 (51%), Gaps = 7/300 (2%)
 Frame = -1

Query: 886  LKKIHPNFFQSMPLLKFLDLSSTSISYLPPSIGDLARLEFLDLSDTKIKELPSEIMKLEN 707
            LK I  +FFQ MP L+ LDLS  +++ LP  I +L  L++L+LS T IKELP E+  L  
Sbjct: 546  LKMITDSFFQFMPNLRVLDLSRNAMTELPQGISNLVSLQYLNLSQTNIKELPIELKNLGK 605

Query: 706  LKYLSFKMTEKLHQIQPGVIAHLSNLQMLKQLWGW*RDGDEALQASIQELACLKQMNALE 527
            LK+L      +L  I   +I+ LS LQ++        DGDEAL   ++EL  LK ++ L 
Sbjct: 606  LKFLLLHRM-RLSSIPEQLISSLSMLQVIDMFNCGICDGDEAL---VEELESLKYLHDLG 661

Query: 526  ILISNVKFLESFLSYPRLVLCTRSLSIESCKDLISLALSSFEYMKRLQKFVIGDCSEMKE 347
            + I++    +  LS  +L  C   + +E+     SL L+S   +KRL+   I +C   ++
Sbjct: 662  VTITSASAFKRLLSSDKLKSCISGVCLENFNGSSSLNLTSLCNVKRLRNLFISNCGSSED 721

Query: 346  LIIDCSTKTAGVELFQSLEIMVFSALPRLVISWDINIPHAACFKNLHALFLDQCDMLVNL 167
            L ID + +  G E  +S  +             +  +   + F NL  L + +C  L +L
Sbjct: 722  LEIDWAWE--GKETTESNYL-------------NSKVSSHSSFHNLSWLRVKRCSRLKDL 766

Query: 166  TWLFLTPNIRVLHVKRCLRIEEII-------SDEFGAFGASLFSKLATLVLDDLPCLWSI 8
            TWL   PN++VL +  C +++EII       S E G    S F KL  L L+DLP L SI
Sbjct: 767  TWLVFAPNLKVLLITSCDQMQEIIGTGKCGESTENGE-NLSPFVKLQVLTLEDLPQLKSI 825


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