BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00016898
         (498 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002328907.1| predicted protein [Populus trichocarpa] gi|2...    70   2e-10
ref|XP_002328860.1| predicted protein [Populus trichocarpa] gi|2...    68   7e-10
ref|XP_003598443.1| F-box/kelch-repeat protein [Medicago truncat...    65   7e-09
ref|XP_004151361.1| PREDICTED: F-box protein CPR30-like [Cucumis...    64   1e-08
ref|XP_002300154.1| predicted protein [Populus trichocarpa] gi|2...    64   1e-08

>ref|XP_002328907.1| predicted protein [Populus trichocarpa] gi|222839337|gb|EEE77674.1|
           predicted protein [Populus trichocarpa]
          Length = 374

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 52/146 (35%), Positives = 75/146 (51%), Gaps = 7/146 (4%)
 Frame = +2

Query: 74  LELPYRFNESLQFSTIIASCQGIVC-LDHANQDINLWNPATKQFIXXXXXXXXXXXXMNG 250
           L+ P  + E   +  I+ SC G+VC L H N  I +WNP+T++               + 
Sbjct: 90  LKFPVSYPE-YSYIEILGSCNGLVCGLIHDNPLIYIWNPSTRE-------SRELAIPGSS 141

Query: 251 GVDIFFGFGYDVKTDDYKVVRVIVEDYYNS-----QRSRVELDSLYTDSWRPIDCVLPFA 415
             D F+GFGYDVK DDYK+VRV +    NS       ++VE+ +L ++ WR I   L  +
Sbjct: 142 EDDAFYGFGYDVKLDDYKIVRVSISTSTNSTDGSNSETKVEVFTLKSNIWRTIQ-DLRCS 200

Query: 416 VVDKHPRAPFQNGIYCWMGR-ENGSS 490
           V+ + P     NG   W+ R ENG S
Sbjct: 201 VLLEGP-GTLANGALHWLVRQENGGS 225


>ref|XP_002328860.1| predicted protein [Populus trichocarpa] gi|222839290|gb|EEE77627.1|
           predicted protein [Populus trichocarpa]
          Length = 360

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 50/164 (30%), Positives = 74/164 (45%), Gaps = 6/164 (3%)
 Frame = +2

Query: 14  PCYSLNFCLLS-GNNYQLFKYLELPYR--FNESLQFSTIIASCQGIVCLDHANQDINLWN 184
           P YS++F   S G+N      L  P     N+S      + SC GIVC+ +    + LWN
Sbjct: 65  PLYSVDFEAASDGDNGNTLVKLSYPNAESHNDSFAVGLFLGSCDGIVCILNEVDSVVLWN 124

Query: 185 PATKQFIXXXXXXXXXXXXMNGGVDIFFGFGYDVKTDDYKVVRVIVEDYYNSQRS---RV 355
           P+T++               +   D   G GYD  TDDYK+  VI      S RS    V
Sbjct: 125 PSTRE------SKKLSGPTSSLHKDFSTGLGYDSSTDDYKM--VIASSATASTRSDQIMV 176

Query: 356 ELDSLYTDSWRPIDCVLPFAVVDKHPRAPFQNGIYCWMGRENGS 487
           E+ +L T++WR +   LP   +  +    F NG   W+G+ + +
Sbjct: 177 EVFTLKTNTWRTVQGSLPGITLGSNYYGEFWNGALLWLGKRDAA 220


>ref|XP_003598443.1| F-box/kelch-repeat protein [Medicago truncatula]
           gi|355487491|gb|AES68694.1| F-box/kelch-repeat protein
           [Medicago truncatula]
          Length = 392

 Score = 64.7 bits (156), Expect = 7e-09
 Identities = 47/133 (35%), Positives = 66/133 (49%), Gaps = 10/133 (7%)
 Frame = +2

Query: 119 IIASCQGIVCL-DHANQDINLWNPATKQFIXXXXXXXXXXXXMNGGVDIFFGFGYDVKTD 295
           II SC GIVC+ D+ N  + LWNP+TK+               NG   + FGFGYD   D
Sbjct: 132 IIGSCNGIVCIADNHNGLVILWNPSTKKI-----KQLPLYEKSNGPTLMTFGFGYDSLND 186

Query: 296 DYKVVRVIV-----EDYYNSQRSRVELDSLYTDSWRPIDCV----LPFAVVDKHPRAPFQ 448
           +YKVV V+      EDY    +++V++ +L T+ WR I       LP  V+    +  F 
Sbjct: 187 NYKVVVVLAYLVLDEDYRFFNKNKVKVHTLGTNIWRTIQDYPFGGLPVPVM----KGEFV 242

Query: 449 NGIYCWMGRENGS 487
           +G   W+  E  S
Sbjct: 243 SGTINWLLSEESS 255


>ref|XP_004151361.1| PREDICTED: F-box protein CPR30-like [Cucumis sativus]
          Length = 366

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 45/140 (32%), Positives = 58/140 (41%), Gaps = 18/140 (12%)
 Frame = +2

Query: 32  FCLLSGNNYQLFKYLELPYRFNESLQFSTI-------------IASCQGIVCLDHANQDI 172
           +C         F +LELP   N S+ F  I             I    G++CL   + DI
Sbjct: 60  WCPRMDTEVNTFSFLELPLSLNSSVSFFDIDFSLNEYFRSIEIIGHSHGLICLSVCHWDI 119

Query: 173 NLWNPATKQFIXXXXXXXXXXXXMNGGVDIFFGFGYDVKTDDYKVVRVI-----VEDYYN 337
            LWNP T +F                      GFGYD K+ D+KVVR +      E YY 
Sbjct: 120 YLWNPLTTEFRKLPPSIILHPRDSYSSFTRAIGFGYDSKSMDFKVVRFMGFAKEPEFYY- 178

Query: 338 SQRSRVELDSLYTDSWRPID 397
             R+RVE+  L  D WR I+
Sbjct: 179 --RTRVEIYDLTKDRWREIE 196


>ref|XP_002300154.1| predicted protein [Populus trichocarpa] gi|222847412|gb|EEE84959.1|
           predicted protein [Populus trichocarpa]
          Length = 372

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 41/127 (32%), Positives = 59/127 (46%), Gaps = 1/127 (0%)
 Frame = +2

Query: 110 FSTIIASCQGIVCLDHANQDINLWNPATKQFIXXXXXXXXXXXXMNGGVDIFFGFGYDVK 289
           F  I+ SC G++CL      + LWNP+T+ +              + G D F G GYD  
Sbjct: 99  FIGIMGSCDGLICLFVDYAKLVLWNPSTRDY------KEMPKPSCDHGFDFFAGIGYDSS 152

Query: 290 TDDYKVVRVIVEDYYNSQRSRVELDSLYTDSWRPIDCVLPFAVVDKHPRAPFQNGIYCWM 469
            DDYK V         S++  VE+ +L T+ WR +  +     +    R  F NG   W+
Sbjct: 153 NDDYKFVIPSCTTADGSEQIMVEVLTLKTNVWRKVPEICQGTTLVGAYRGLFCNGAVHWL 212

Query: 470 GR-ENGS 487
           G+ ENGS
Sbjct: 213 GKQENGS 219