BLASTX nr result

ID: Coptis23_contig00016884 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00016884
         (731 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276292.2| PREDICTED: uncharacterized protein LOC100262...    79   1e-12
emb|CBI40456.3| unnamed protein product [Vitis vinifera]               79   1e-12
emb|CAN69310.1| hypothetical protein VITISV_003086 [Vitis vinifera]    79   1e-12
ref|XP_002320170.1| predicted protein [Populus trichocarpa] gi|2...    78   2e-12
ref|XP_002301386.1| predicted protein [Populus trichocarpa] gi|2...    77   3e-12

>ref|XP_002276292.2| PREDICTED: uncharacterized protein LOC100262009 [Vitis vinifera]
          Length = 1026

 Score = 79.0 bits (193), Expect = 1e-12
 Identities = 55/131 (41%), Positives = 66/131 (50%), Gaps = 6/131 (4%)
 Frame = +2

Query: 206 QVDYLQWICTXXXXXXXXXXXQMFLHXXXXXXXXXXXXRDR---GELVSFKXXXXXXXXX 376
           ++DYLQW+CT           QMFL                   G+L   K         
Sbjct: 41  KLDYLQWVCTVAVFCFFVVLFQMFLPGLIMEKSGESLKNMENGYGDLSFIKNIGGLDFGE 100

Query: 377 XXXXXPSKLLDKFQKEATTQLNLS---RPLVRSGVRKPQLALVFADLSVEPGQLLMASVA 547
                PSKLL KFQKEA  ++NLS   R   R G RKPQLALVF DL V+P QLLM +VA
Sbjct: 101 GIRFEPSKLLQKFQKEAD-EVNLSSASRLRHRFGYRKPQLALVFPDLLVDPQQLLMVTVA 159

Query: 548 VSLQEIGYAIE 580
            +L E+GY I+
Sbjct: 160 SALLEMGYTIQ 170


>emb|CBI40456.3| unnamed protein product [Vitis vinifera]
          Length = 1026

 Score = 79.0 bits (193), Expect = 1e-12
 Identities = 55/131 (41%), Positives = 66/131 (50%), Gaps = 6/131 (4%)
 Frame = +2

Query: 206 QVDYLQWICTXXXXXXXXXXXQMFLHXXXXXXXXXXXXRDR---GELVSFKXXXXXXXXX 376
           ++DYLQW+CT           QMFL                   G+L   K         
Sbjct: 41  KLDYLQWVCTVAVFCFFVVLFQMFLPGLIMEKSGESLKNMENGYGDLSFIKNIGGLDFGE 100

Query: 377 XXXXXPSKLLDKFQKEATTQLNLS---RPLVRSGVRKPQLALVFADLSVEPGQLLMASVA 547
                PSKLL KFQKEA  ++NLS   R   R G RKPQLALVF DL V+P QLLM +VA
Sbjct: 101 GIRFEPSKLLQKFQKEAD-EVNLSSASRLRHRFGYRKPQLALVFPDLLVDPQQLLMVTVA 159

Query: 548 VSLQEIGYAIE 580
            +L E+GY I+
Sbjct: 160 SALLEMGYTIQ 170


>emb|CAN69310.1| hypothetical protein VITISV_003086 [Vitis vinifera]
          Length = 1040

 Score = 79.0 bits (193), Expect = 1e-12
 Identities = 55/131 (41%), Positives = 66/131 (50%), Gaps = 6/131 (4%)
 Frame = +2

Query: 206 QVDYLQWICTXXXXXXXXXXXQMFLHXXXXXXXXXXXXRDR---GELVSFKXXXXXXXXX 376
           ++DYLQW+CT           QMFL                   G+L   K         
Sbjct: 41  KLDYLQWVCTVAVFCFFVVLFQMFLPGLIMEKSGESLKNMENGYGDLSFIKKIGGLDFGE 100

Query: 377 XXXXXPSKLLDKFQKEATTQLNLS---RPLVRSGVRKPQLALVFADLSVEPGQLLMASVA 547
                PSKLL KFQKEA  ++NLS   R   R G RKPQLALVF DL V+P QLLM +VA
Sbjct: 101 GIRFEPSKLLQKFQKEAD-EVNLSSASRLRHRFGYRKPQLALVFPDLLVDPQQLLMVTVA 159

Query: 548 VSLQEIGYAIE 580
            +L E+GY I+
Sbjct: 160 SALLEMGYTIQ 170


>ref|XP_002320170.1| predicted protein [Populus trichocarpa] gi|222860943|gb|EEE98485.1|
           predicted protein [Populus trichocarpa]
          Length = 990

 Score = 77.8 bits (190), Expect = 2e-12
 Identities = 56/133 (42%), Positives = 67/133 (50%), Gaps = 9/133 (6%)
 Frame = +2

Query: 206 QVDYLQWICTXXXXXXXXXXXQMFLHXXXXXXXXXXXXRDRG-ELVS-----FKXXXXXX 367
           ++DY+QWICT           QMFL               RG ELV       K      
Sbjct: 48  KLDYIQWICTVAVFLFFVVLFQMFLPGSVVEKSELGSSPWRGMELVDKDLWYLKEIGGLD 107

Query: 368 XXXXXXXXPSKLLDKFQKEATTQLNLS---RPLVRSGVRKPQLALVFADLSVEPGQLLMA 538
                   PSK+L  F+KE   ++N+S   R L R   RKPQLALVFADL V+P QLLM 
Sbjct: 108 FGEDIKFQPSKILQHFRKE-NREMNMSFSNRTLSRFPYRKPQLALVFADLLVDPHQLLMV 166

Query: 539 SVAVSLQEIGYAI 577
           +VA +LQEIGY I
Sbjct: 167 TVATALQEIGYTI 179


>ref|XP_002301386.1| predicted protein [Populus trichocarpa] gi|222843112|gb|EEE80659.1|
           predicted protein [Populus trichocarpa]
          Length = 990

 Score = 77.4 bits (189), Expect = 3e-12
 Identities = 53/133 (39%), Positives = 67/133 (50%), Gaps = 9/133 (6%)
 Frame = +2

Query: 206 QVDYLQWICTXXXXXXXXXXXQMFLHXXXXXXXXXXXXRDRG------ELVSFKXXXXXX 367
           ++DY+QWICT           QMFL               RG      +L+  K      
Sbjct: 48  KLDYIQWICTVAVFLFFVVLFQMFLPGSVVEKSELGSSPWRGMELVNKDLLYLKEIGGLD 107

Query: 368 XXXXXXXXPSKLLDKFQKEATTQLNL---SRPLVRSGVRKPQLALVFADLSVEPGQLLMA 538
                   PSK+L KF+KE   ++N+   +  L R   RKPQLALVFADL V+P QLLM 
Sbjct: 108 FGEDIKFEPSKILQKFRKE-NREMNMPFTNGTLSRFPYRKPQLALVFADLLVDPQQLLMV 166

Query: 539 SVAVSLQEIGYAI 577
           +VA +LQEIGY I
Sbjct: 167 TVATALQEIGYTI 179


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