BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00016880
         (276 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002326106.1| predicted protein [Populus trichocarpa] gi|1...    75   5e-12
gb|AEV41137.1| D6-type cyclin [Populus x canadensis]                   74   2e-11
emb|CAO00120.1| D6-type cyclin [Populus trichocarpa]                   66   3e-09
ref|XP_003540333.1| PREDICTED: putative cyclin-D6-1-like [Glycin...    65   4e-09
ref|NP_001242717.1| uncharacterized protein LOC100799951 [Glycin...    63   3e-08

>ref|XP_002326106.1| predicted protein [Populus trichocarpa]
           gi|159025735|emb|CAN88868.1| D6-type cyclin [Populus
           trichocarpa] gi|222862981|gb|EEF00488.1| predicted
           protein [Populus trichocarpa]
          Length = 324

 Score = 75.1 bits (183), Expect = 5e-12
 Identities = 42/98 (42%), Positives = 55/98 (56%), Gaps = 6/98 (6%)
 Frame = +1

Query: 1   FRNTICSCAYVNNEKLMECGNVMNDMAIDGYDSVIENVSSSHTPVNVLDQHW----XXXX 168
           FR  I  C+YVN E L++C N M + A+DGY S  + VSSS TPVNVLD+H+        
Sbjct: 217 FRKAISICSYVNKENLLQCYNAMQETAMDGYKSQFDMVSSSDTPVNVLDRHFSSSESENT 276

Query: 169 XXXXXXXXXXGCMRS--ERDLKRSKISDFCGNKTFQFS 276
                     G  ++  E+ +KR KIS  C N+T QFS
Sbjct: 277 NGTVVMISSNGSNKTWPEKGIKRRKISALCNNQTVQFS 314


>gb|AEV41137.1| D6-type cyclin [Populus x canadensis]
          Length = 324

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 41/98 (41%), Positives = 55/98 (56%), Gaps = 6/98 (6%)
 Frame = +1

Query: 1   FRNTICSCAYVNNEKLMECGNVMNDMAIDGYDSVIENVSSSHTPVNVLDQHW----XXXX 168
           FR  I  C++VN E L++C N M + A+DGY S  + VSSS TPVNVLD+H+        
Sbjct: 217 FRKAISICSHVNKENLLQCYNAMQETAMDGYKSQFDMVSSSDTPVNVLDRHFLSSESENT 276

Query: 169 XXXXXXXXXXGCMRS--ERDLKRSKISDFCGNKTFQFS 276
                     G  ++  E+D+KR KIS  C N+T Q S
Sbjct: 277 NGTVVMISSDGSNKTWPEKDIKRRKISALCNNQTVQLS 314


>emb|CAO00120.1| D6-type cyclin [Populus trichocarpa]
          Length = 156

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 29/52 (55%), Positives = 39/52 (75%)
 Frame = +1

Query: 1   FRNTICSCAYVNNEKLMECGNVMNDMAIDGYDSVIENVSSSHTPVNVLDQHW 156
           FR  I +C++VN E L++C N M ++A+DGY S  + VSSS TPVNVLDQH+
Sbjct: 97  FRKAISNCSHVNKENLLQCYNAMQEIAMDGYRSQFDMVSSSDTPVNVLDQHF 148


>ref|XP_003540333.1| PREDICTED: putative cyclin-D6-1-like [Glycine max]
          Length = 315

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 33/92 (35%), Positives = 52/92 (56%)
 Frame = +1

Query: 1   FRNTICSCAYVNNEKLMECGNVMNDMAIDGYDSVIENVSSSHTPVNVLDQHWXXXXXXXX 180
           F   I  C+Y+N E +++C NV++D+  + Y+SV+   S+S TPVNVLD+H+        
Sbjct: 222 FLRAISDCSYINKETVVQCYNVIHDITREEYESVLNINSTSDTPVNVLDEHF---LSLES 278

Query: 181 XXXXXXGCMRSERDLKRSKISDFCGNKTFQFS 276
                   +  E+D KR K +D+  N+T  FS
Sbjct: 279 EKTNGTNVVTQEQDFKRRKTTDYGNNRTVPFS 310


>ref|NP_001242717.1| uncharacterized protein LOC100799951 [Glycine max]
           gi|255634925|gb|ACU17821.1| unknown [Glycine max]
          Length = 316

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 33/92 (35%), Positives = 50/92 (54%)
 Frame = +1

Query: 1   FRNTICSCAYVNNEKLMECGNVMNDMAIDGYDSVIENVSSSHTPVNVLDQHWXXXXXXXX 180
           F   I  C+Y+N E +++C NV+ D+A + Y SV+   S+S TPVNVLD+H+        
Sbjct: 222 FLRAISDCSYINKETVVQCYNVIQDIAREEYKSVLNINSTSDTPVNVLDEHFLSLESEKT 281

Query: 181 XXXXXXGCMRSERDLKRSKISDFCGNKTFQFS 276
                   +  E+D KR K +D+  N+   FS
Sbjct: 282 NGTNV--VVTQEQDFKRRKTTDYGNNRRVPFS 311